Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
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Accession | NC_011004 |
Length | 5,744,041 |
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The map label for this gene is ampG [H]
Identifier: 192289053
GI number: 192289053
Start: 676650
End: 678029
Strand: Reverse
Name: ampG [H]
Synonym: Rpal_0623
Alternate gene names: 192289053
Gene position: 678029-676650 (Counterclockwise)
Preceding gene: 192289054
Following gene: 192289048
Centisome position: 11.8
GC content: 67.17
Gene sequence:
>1380_bases ATGACCAGCCCTACTGCCGGCCTGCCAGAGGCCGATCCCGCCGCTCCGCAGATCTCCACCAAGCCGAGCTGGCGCGAGGC GATGGCGGTGTACTTACAGCCGCGGGTGCTGGTGGTGCTGTTCCTCGGGTTCTCGTCGGGGCTGCCGCTGGCGCTGTCCG GCTCGACCCTATTGGTATGGATGCGGGAGTCCGGCGTCGACCTCGGCACGATCGGCCTGTTCGCGCTGGTCGGCACGCCC TACACGCTGAAGTTCATCTGGGCGCCGCTGGTCGATGCGCTGCACGTGCCGCTGTTCACCAGAGCATTCGGACGCCGCCG CGGCTGGCTGGTGTTCGTCCAACTGCTGCTGATCGCCGCGATCCTGCTGCTGGCGCTTACCGATCCGGCGAAGTCGCCAC TGTATGTGGCGATCGGCGCGCTGCTGGTCGCCACCGCCTCGGCGACCCAGGACATCGTGGTCGACGCGTTCCGGGTCGAG AGCCTGCCGGAAGAGGAACAGGCTGCCGGCATGGCGTCCTACGTGGCTGCCTACCGCATCGGCATGTTGATCTCCACCGC CGGCGTGCTGTTCCTGGTCAGCGCTTATGAAGGTACCGGACTGACCCGGACCACCGCATGGATGTGGGGCTATGTGACGA TGGCCGCGATGGTGCTGATCGGCACCGTCACCGCGCTGCTCGCCACCGAGCCGGAACAGTCGCGCCGCGCCGAAGCAGCG ACCAGCGGCGAGAGCGCATTGAAGCGGGTGATCCACGCCGCTCTGGGGGCGTTCACCGAATTTCTCACCCGCAAGGACGC GCTCACCGCCCTCGCCTTCGTGGTGCTGTTCAAGTTCACCGATGCATTTTCCGGCACCATGACGGCGCCGTTCGTGATCG ATCTCGGCTATTCGCGCAATGATTATGCGGCAATCGTGAAGGGCGTCGGGCTGGCGGCGACGCTGATCGGCGGCTTCGCC GGCGGTTATCTGGCGCGGCGCTATTCGCTGGTGGCGAGCCTATGGATCGGCGCGGTGCTGCAGGCGGTGTCGAACCTGGC GTTCGCCTGGCTGTCGACCGTCGGCGTCAACCAATGGGCGCTGGCGCTGGCGATCTCGGTGGAGAATTTCACCGGCGCGA TCGGCACCGTGATTTTCGTCGCGTATCTGTCGGCGCTGTGCCAGAACCCGCTGCACACTGCGACGCAATACGCGCTGCTC ACCGCCCTCGCCGCCGTCGGCCGCACCTACCTGTCGGCGAGTGCCGGATACGTCGCGCAGGCCACCGGCTGGCCGGCGTT CTTCACCATCAGCGTTGCGGTCGCGGCGCCGAGCTTGGTGCTCCTGGCGTGGCTGCAACGCCGCGGCCATTTCGCCGCGC TCGGACCGGTGAAGGTTTAG
Upstream 100 bases:
>100_bases AGCTTCCGGATCGATGAAATGACGCGGAGCTGACGCAGCCCGCTCGGGCGGCGACACCGGGCCGTCCGCCCGGTGTCGCC GAATCGGATAGGTTCATCCC
Downstream 100 bases:
>100_bases GCGCCGCCCGCTCCTCGCAACGCCGACGAGAGCCCGTCGCTTACTTCACCAGACTCCATTTCGTCACCACCGCCTCGCTC ATCTGGCCGGGCTCGTTGGC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MTSPTAGLPEADPAAPQISTKPSWREAMAVYLQPRVLVVLFLGFSSGLPLALSGSTLLVWMRESGVDLGTIGLFALVGTP YTLKFIWAPLVDALHVPLFTRAFGRRRGWLVFVQLLLIAAILLLALTDPAKSPLYVAIGALLVATASATQDIVVDAFRVE SLPEEEQAAGMASYVAAYRIGMLISTAGVLFLVSAYEGTGLTRTTAWMWGYVTMAAMVLIGTVTALLATEPEQSRRAEAA TSGESALKRVIHAALGAFTEFLTRKDALTALAFVVLFKFTDAFSGTMTAPFVIDLGYSRNDYAAIVKGVGLAATLIGGFA GGYLARRYSLVASLWIGAVLQAVSNLAFAWLSTVGVNQWALALAISVENFTGAIGTVIFVAYLSALCQNPLHTATQYALL TALAAVGRTYLSASAGYVAQATGWPAFFTISVAVAAPSLVLLAWLQRRGHFAALGPVKV
Sequences:
>Translated_459_residues MTSPTAGLPEADPAAPQISTKPSWREAMAVYLQPRVLVVLFLGFSSGLPLALSGSTLLVWMRESGVDLGTIGLFALVGTP YTLKFIWAPLVDALHVPLFTRAFGRRRGWLVFVQLLLIAAILLLALTDPAKSPLYVAIGALLVATASATQDIVVDAFRVE SLPEEEQAAGMASYVAAYRIGMLISTAGVLFLVSAYEGTGLTRTTAWMWGYVTMAAMVLIGTVTALLATEPEQSRRAEAA TSGESALKRVIHAALGAFTEFLTRKDALTALAFVVLFKFTDAFSGTMTAPFVIDLGYSRNDYAAIVKGVGLAATLIGGFA GGYLARRYSLVASLWIGAVLQAVSNLAFAWLSTVGVNQWALALAISVENFTGAIGTVIFVAYLSALCQNPLHTATQYALL TALAAVGRTYLSASAGYVAQATGWPAFFTISVAVAAPSLVLLAWLQRRGHFAALGPVKV >Mature_458_residues TSPTAGLPEADPAAPQISTKPSWREAMAVYLQPRVLVVLFLGFSSGLPLALSGSTLLVWMRESGVDLGTIGLFALVGTPY TLKFIWAPLVDALHVPLFTRAFGRRRGWLVFVQLLLIAAILLLALTDPAKSPLYVAIGALLVATASATQDIVVDAFRVES LPEEEQAAGMASYVAAYRIGMLISTAGVLFLVSAYEGTGLTRTTAWMWGYVTMAAMVLIGTVTALLATEPEQSRRAEAAT SGESALKRVIHAALGAFTEFLTRKDALTALAFVVLFKFTDAFSGTMTAPFVIDLGYSRNDYAAIVKGVGLAATLIGGFAG GYLARRYSLVASLWIGAVLQAVSNLAFAWLSTVGVNQWALALAISVENFTGAIGTVIFVAYLSALCQNPLHTATQYALLT ALAAVGRTYLSASAGYVAQATGWPAFFTISVAVAAPSLVLLAWLQRRGHFAALGPVKV
Specific function: Probably acts as a permease in the beta-lactamase induction system and in peptidoglycan recycling [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Homo sapiens, GI300360496, Length=211, Percent_Identity=29.8578199052133, Blast_Score=65, Evalue=9e-11, Organism=Homo sapiens, GI4757708, Length=211, Percent_Identity=29.8578199052133, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1786636, Length=418, Percent_Identity=38.9952153110048, Blast_Score=269, Evalue=4e-73, Organism=Drosophila melanogaster, GI24665528, Length=315, Percent_Identity=26.3492063492064, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI24665524, Length=315, Percent_Identity=26.3492063492064, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004752 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48482; Mature: 48351
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPTAGLPEADPAAPQISTKPSWREAMAVYLQPRVLVVLFLGFSSGLPLALSGSTLLVW CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCEEECCCEEEEE MRESGVDLGTIGLFALVGTPYTLKFIWAPLVDALHVPLFTRAFGRRRGWLVFVQLLLIAA EECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ILLLALTDPAKSPLYVAIGALLVATASATQDIVVDAFRVESLPEEEQAAGMASYVAAYRI HHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GMLISTAGVLFLVSAYEGTGLTRTTAWMWGYVTMAAMVLIGTVTALLATEPEQSRRAEAA HHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TSGESALKRVIHAALGAFTEFLTRKDALTALAFVVLFKFTDAFSGTMTAPFVIDLGYSRN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC DYAAIVKGVGLAATLIGGFAGGYLARRYSLVASLWIGAVLQAVSNLAFAWLSTVGVNQWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LALAISVENFTGAIGTVIFVAYLSALCQNPLHTATQYALLTALAAVGRTYLSASAGYVAQ EEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE ATGWPAFFTISVAVAAPSLVLLAWLQRRGHFAALGPVKV CCCCCCHHEEHHHHHHHHHHHHHHHHHCCCEEECCCCCC >Mature Secondary Structure TSPTAGLPEADPAAPQISTKPSWREAMAVYLQPRVLVVLFLGFSSGLPLALSGSTLLVW CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCEEECCCEEEEE MRESGVDLGTIGLFALVGTPYTLKFIWAPLVDALHVPLFTRAFGRRRGWLVFVQLLLIAA EECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH ILLLALTDPAKSPLYVAIGALLVATASATQDIVVDAFRVESLPEEEQAAGMASYVAAYRI HHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GMLISTAGVLFLVSAYEGTGLTRTTAWMWGYVTMAAMVLIGTVTALLATEPEQSRRAEAA HHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TSGESALKRVIHAALGAFTEFLTRKDALTALAFVVLFKFTDAFSGTMTAPFVIDLGYSRN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC DYAAIVKGVGLAATLIGGFAGGYLARRYSLVASLWIGAVLQAVSNLAFAWLSTVGVNQWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LALAISVENFTGAIGTVIFVAYLSALCQNPLHTATQYALLTALAAVGRTYLSASAGYVAQ EEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE ATGWPAFFTISVAVAAPSLVLLAWLQRRGHFAALGPVKV CCCCCCHHEEHHHHHHHHHHHHHHHHHCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]