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The map label for this gene is rmuC [H]

Identifier: 192289054

GI number: 192289054

Start: 678097

End: 679299

Strand: Reverse

Name: rmuC [H]

Synonym: Rpal_0624

Alternate gene names: 192289054

Gene position: 679299-678097 (Counterclockwise)

Preceding gene: 192289058

Following gene: 192289053

Centisome position: 11.83

GC content: 66.25

Gene sequence:

>1203_bases
ATGGACCAGATTCTGTTCAGGCTCGGCGATCTGCCGGTCAACATCGGCATGGCCGCCGCCGTTTTCGCCGCCCTCGCGCT
GGTCCTGCTGACGACCATCGTCGTGCTGATGGCCCGTGGCAGCGCCACGCGGCGGACCGCGGAAATCGATCAACGACTGG
CGCTTTTGATGCGGGCTCAGCACGAGGCCAACGGCCGGGTCGATGCGATGGGCCGGGCACTCGCCGGCCGCCAGGCCGAG
ATGGCGCGGGCGATGAGCGAACGGCTCGACAGCGTCACCCACCGGTTCGGCCAGTCGCTGACCCAGTCAACCCGATACAC
CATGCAGAGCCTGCAGGCGCTGCACGAGCGGCTCGGCATCATCGACCGTGCCCACGACAACCTCACCGAACTGACCGACC
AGGTGACGACGCTCCGCGACGTGCTCGCCAACAAGCAGGCCCGCGGCGCCTTCGGCCAGGCGCGGATGGAGACGATCGTG
CAGGACGGGCTGCCGAAAGGTTCGTTCGCGTTCCAGTACACGCTGTCGACCGGCAAACGGCCAGACTGCGTGGTGCTGAT
GCCGAATCAGCCGCCGCTGTGCATCGACGCCAAGTTCCCGCTCGAAGCGGTCACCGCGCTGCGCGAAGCGACCACCGAGG
AAGCCAAGAAAGCGGCCTCGCAGCGGCTACGCACCGACGTGATGCGCCATGTCGACGATATCGCGTCGAAATACCTGATC
CCCGGCGAGACCCAGGACACCGCGCTGATGTTCGTCCCGTCGGAGTCGGTCTATGCGGAAATCCACGACGGTTTCGACGA
CGTCATTCAGAAAGCCTACCGGGCTCGCGTCGTGCTGGTGTCGCCGTCTCTGCTGATGCTGGCGATCCAGGTGATGCAGC
AGATCCTCAAGGACGCGCGGATGCGGGACGCCGCCGACCAGATCCGCACCGAGGTGCTCAGTCTTGGCGACGATCTGGCT
CGGCTGCGCGAGCGCGTCACGAAACTGCAGACCCATTTCGGCCAAGTCACCGACGACGTCCGCCAGATCCTGATCTCCGC
CGACAAGATCGAGCGCCGCGCCGCTCGGATCGAGGAGCTCGACTTCACCGACCAAGCCGCCGGGACGGCATCAGCACCTG
CCCCCGAAGCCCCATTGGCGCCGGATCGCGCCGATCTGTTCGCCGCAGCGAGCTTCCGGATCGATGAAATGACGCGGAGC
TGA

Upstream 100 bases:

>100_bases
GAGCTTCTGCCACTTTCGGCGCGGCTCGCCTTAAAGGTCTGTTCAGCGTCATGTTCTATCTTCGTTCTTGATGGCTGTGC
AATCTGCTACACCGGCGGCG

Downstream 100 bases:

>100_bases
CGCAGCCCGCTCGGGCGGCGACACCGGGCCGTCCGCCCGGTGTCGCCGAATCGGATAGGTTCATCCCATGACCAGCCCTA
CTGCCGGCCTGCCAGAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MDQILFRLGDLPVNIGMAAAVFAALALVLLTTIVVLMARGSATRRTAEIDQRLALLMRAQHEANGRVDAMGRALAGRQAE
MARAMSERLDSVTHRFGQSLTQSTRYTMQSLQALHERLGIIDRAHDNLTELTDQVTTLRDVLANKQARGAFGQARMETIV
QDGLPKGSFAFQYTLSTGKRPDCVVLMPNQPPLCIDAKFPLEAVTALREATTEEAKKAASQRLRTDVMRHVDDIASKYLI
PGETQDTALMFVPSESVYAEIHDGFDDVIQKAYRARVVLVSPSLLMLAIQVMQQILKDARMRDAADQIRTEVLSLGDDLA
RLRERVTKLQTHFGQVTDDVRQILISADKIERRAARIEELDFTDQAAGTASAPAPEAPLAPDRADLFAAASFRIDEMTRS

Sequences:

>Translated_400_residues
MDQILFRLGDLPVNIGMAAAVFAALALVLLTTIVVLMARGSATRRTAEIDQRLALLMRAQHEANGRVDAMGRALAGRQAE
MARAMSERLDSVTHRFGQSLTQSTRYTMQSLQALHERLGIIDRAHDNLTELTDQVTTLRDVLANKQARGAFGQARMETIV
QDGLPKGSFAFQYTLSTGKRPDCVVLMPNQPPLCIDAKFPLEAVTALREATTEEAKKAASQRLRTDVMRHVDDIASKYLI
PGETQDTALMFVPSESVYAEIHDGFDDVIQKAYRARVVLVSPSLLMLAIQVMQQILKDARMRDAADQIRTEVLSLGDDLA
RLRERVTKLQTHFGQVTDDVRQILISADKIERRAARIEELDFTDQAAGTASAPAPEAPLAPDRADLFAAASFRIDEMTRS
>Mature_400_residues
MDQILFRLGDLPVNIGMAAAVFAALALVLLTTIVVLMARGSATRRTAEIDQRLALLMRAQHEANGRVDAMGRALAGRQAE
MARAMSERLDSVTHRFGQSLTQSTRYTMQSLQALHERLGIIDRAHDNLTELTDQVTTLRDVLANKQARGAFGQARMETIV
QDGLPKGSFAFQYTLSTGKRPDCVVLMPNQPPLCIDAKFPLEAVTALREATTEEAKKAASQRLRTDVMRHVDDIASKYLI
PGETQDTALMFVPSESVYAEIHDGFDDVIQKAYRARVVLVSPSLLMLAIQVMQQILKDARMRDAADQIRTEVLSLGDDLA
RLRERVTKLQTHFGQVTDDVRQILISADKIERRAARIEELDFTDQAAGTASAPAPEAPLAPDRADLFAAASFRIDEMTRS

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 44198; Mature: 44198

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQILFRLGDLPVNIGMAAAVFAALALVLLTTIVVLMARGSATRRTAEIDQRLALLMRAQ
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
HEANGRVDAMGRALAGRQAEMARAMSERLDSVTHRFGQSLTQSTRYTMQSLQALHERLGI
HHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDRAHDNLTELTDQVTTLRDVLANKQARGAFGQARMETIVQDGLPKGSFAFQYTLSTGKR
HHHCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
PDCVVLMPNQPPLCIDAKFPLEAVTALREATTEEAKKAASQRLRTDVMRHVDDIASKYLI
CCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGETQDTALMFVPSESVYAEIHDGFDDVIQKAYRARVVLVSPSLLMLAIQVMQQILKDAR
CCCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHH
MRDAADQIRTEVLSLGDDLARLRERVTKLQTHFGQVTDDVRQILISADKIERRAARIEEL
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DFTDQAAGTASAPAPEAPLAPDRADLFAAASFRIDEMTRS
CCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDQILFRLGDLPVNIGMAAAVFAALALVLLTTIVVLMARGSATRRTAEIDQRLALLMRAQ
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
HEANGRVDAMGRALAGRQAEMARAMSERLDSVTHRFGQSLTQSTRYTMQSLQALHERLGI
HHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDRAHDNLTELTDQVTTLRDVLANKQARGAFGQARMETIVQDGLPKGSFAFQYTLSTGKR
HHHCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
PDCVVLMPNQPPLCIDAKFPLEAVTALREATTEEAKKAASQRLRTDVMRHVDDIASKYLI
CCEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGETQDTALMFVPSESVYAEIHDGFDDVIQKAYRARVVLVSPSLLMLAIQVMQQILKDAR
CCCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHH
MRDAADQIRTEVLSLGDDLARLRERVTKLQTHFGQVTDDVRQILISADKIERRAARIEEL
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DFTDQAAGTASAPAPEAPLAPDRADLFAAASFRIDEMTRS
CCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]