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The map label for this gene is 192288993

Identifier: 192288993

GI number: 192288993

Start: 612630

End: 613235

Strand: Reverse

Name: 192288993

Synonym: Rpal_0563

Alternate gene names: NA

Gene position: 613235-612630 (Counterclockwise)

Preceding gene: 192288994

Following gene: 192288992

Centisome position: 10.68

GC content: 63.86

Gene sequence:

>606_bases
ATGCAGCGTTTCGTCTGCGAACAGAACATCGCGCACTTCCAAAAGCTGCTCGAGACTGCCGAGGACGAGAAGCTGCGGCG
AACGCTGCTCGGCCTGCTGTCGTCTGCCAAGCGCGAACTGGCACTGCTGCACTCGCAGCTCTCCGGCGCCGACCTGTCGC
CGCTGGCGTATCGCAACCGAGGCGGTGATCTCAATTCGGTGCTGGCGCAAATCCGCGCCGGCTTCGATGCCTCCGACCAT
CCCTACATGCTGATCGATGCCGGACCCGGCCTGAAGATCATCGACATCAACGACGCCTATGCGCGCGCAACCTTCACGGC
GCGCGAGGCCATCGTCGGCAAGCCGCTGTTCGAGATCTTCCCGGACAATCCGGCGATCGACACCGCCGACGGCGTGAGCA
ACGTCTACAATTCGCTGCGCGCCGTGGTCGAAACCGGCGAGCCGCACGCGCTCGCTGTGCAGCGCTACGATATGCGCAAC
ACCGAGGGCGTGTTCGTCGAGCGCTACTGGCAATCGATCAACACGCCGGTGCGCGACGCCGGCGGCAAGCTGATCTGCCT
GCTGCACAATGTCGAAGACGTCACCGCCGAAGTGCTGGCGAATTAG

Upstream 100 bases:

>100_bases
CGAAGCGACGGCGTTGGGTCGCTAGGGAACCTTTCGCGGTATTGACATACTTTCAATCTGGCGTAGCAGAAGAGCCGACA
CTCCCGGCGGAGAGCGGCCG

Downstream 100 bases:

>100_bases
CCGGCGGCGGTACTCGGCGCACGCAACCACGTCCCCTTCCCGGCCGGTCACGAAGCCGTGGCGAAACCATCTCCCTGCTC
ATGCGTCTGGAAGGCGTTGT

Product: PAS fold-4 domain-containing protein

Products: NA

Alternate protein names: PAS/PAC Sensor Protein; Stage II Sporulation Protein E; Sensor Histidine Kinase; Two-Component Hybrid Sensor And Regulator; Multi-Sensor Hybrid Histidine Kinase; PAS Sensor Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Sensor Protein; Sensory Box Histidine Kinase/Response Regulator; HWE Histidine Kinase Family; PAS Fold-4 Domain-Containing Protein; Two-Component Sensor Protein; PAS/PAC Sensor Hybrid Histidine Kinase; Sensory Box Sensor Histidine Kinase/Response Regulator; Signal Transduction Histidine Kinase

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MQRFVCEQNIAHFQKLLETAEDEKLRRTLLGLLSSAKRELALLHSQLSGADLSPLAYRNRGGDLNSVLAQIRAGFDASDH
PYMLIDAGPGLKIIDINDAYARATFTAREAIVGKPLFEIFPDNPAIDTADGVSNVYNSLRAVVETGEPHALAVQRYDMRN
TEGVFVERYWQSINTPVRDAGGKLICLLHNVEDVTAEVLAN

Sequences:

>Translated_201_residues
MQRFVCEQNIAHFQKLLETAEDEKLRRTLLGLLSSAKRELALLHSQLSGADLSPLAYRNRGGDLNSVLAQIRAGFDASDH
PYMLIDAGPGLKIIDINDAYARATFTAREAIVGKPLFEIFPDNPAIDTADGVSNVYNSLRAVVETGEPHALAVQRYDMRN
TEGVFVERYWQSINTPVRDAGGKLICLLHNVEDVTAEVLAN
>Mature_201_residues
MQRFVCEQNIAHFQKLLETAEDEKLRRTLLGLLSSAKRELALLHSQLSGADLSPLAYRNRGGDLNSVLAQIRAGFDASDH
PYMLIDAGPGLKIIDINDAYARATFTAREAIVGKPLFEIFPDNPAIDTADGVSNVYNSLRAVVETGEPHALAVQRYDMRN
TEGVFVERYWQSINTPVRDAGGKLICLLHNVEDVTAEVLAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22179; Mature: 22179

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFVCEQNIAHFQKLLETAEDEKLRRTLLGLLSSAKRELALLHSQLSGADLSPLAYRNR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
GGDLNSVLAQIRAGFDASDHPYMLIDAGPGLKIIDINDAYARATFTAREAIVGKPLFEIF
CCCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHC
PDNPAIDTADGVSNVYNSLRAVVETGEPHALAVQRYDMRNTEGVFVERYWQSINTPVRDA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHC
GGKLICLLHNVEDVTAEVLAN
CCEEEEEEECHHHHHHHHHCC
>Mature Secondary Structure
MQRFVCEQNIAHFQKLLETAEDEKLRRTLLGLLSSAKRELALLHSQLSGADLSPLAYRNR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
GGDLNSVLAQIRAGFDASDHPYMLIDAGPGLKIIDINDAYARATFTAREAIVGKPLFEIF
CCCHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHC
PDNPAIDTADGVSNVYNSLRAVVETGEPHALAVQRYDMRNTEGVFVERYWQSINTPVRDA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHC
GGKLICLLHNVEDVTAEVLAN
CCEEEEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA