Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
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Accession | NC_011004 |
Length | 5,744,041 |
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The map label for this gene is 192288978
Identifier: 192288978
GI number: 192288978
Start: 598335
End: 599411
Strand: Reverse
Name: 192288978
Synonym: Rpal_0548
Alternate gene names: NA
Gene position: 599411-598335 (Counterclockwise)
Preceding gene: 192288980
Following gene: 192288973
Centisome position: 10.44
GC content: 68.62
Gene sequence:
>1077_bases ATGAGCGAAGCCGTGATCGACGACATCGTGGCGCTGCTGCCGCCGCTGCTGCAGAGCCTCGAATCGCTCGGCTTCGTCGC GCGCTATCTGCACCCGCCGGAATTCGGCGACCTTCTTAAGCTCGCCGGCACGCCCGACGAGGCCCTGCAGACCGAGTTGC CACGACTGGCGAATTGGCCTGAGACCTTCGCGCATCTGCGTGGTCCGCTGCAGACCGCCGGCGAGCAGGCGCTCACGGCC TTTGCCGGCCTGCGCGCGGTCGATGCCGGCCAGGGCGATCTCGGCGACGTCTTCCGGGCGCTCCGGCATCTGCCGCAGGC GCTGGAGGCGCTGTATCCGCTCGCTGCCAATCTGCCGCCGGTGTCGAGTTTCTTCCTCGATCCGGACAGCCAGGAGAACG ACAAATTGCTGGCGCGACTGACGCAGCCGAAGCATCCGGACAGCGGCGTGTTTCACCGGTTCAACGAGCCCGGCAGCCGC GGCGGCTATTCGCTCTACGTGCCGGAATATTACGACCCCGATCGGGAGTGGCCGCTGGTGATGGCGCTGCATGGCGGCAG CGGCCATGGCCGGCTGTTCCTGTGGAGCTGGCTGCGCGACGCCCGCGCCCGCGGCGCCATCGTAGTGGCGCCGACTGCAA CCGGACGAACCTGGGCGCTGATTGGCGAGGATGTCGATTCGCCGAATCTGGCCCGCATCCTCGACGAGGTGCGGGGACAT TGGCGGATCGATCCGTCACGACTGCTGCTAACCGGCCTCAGCGACGGCGGCACGTTCTGCTACGTCTCGGGCCTGACCAG CGACTCGCCCTTTACCCATCTGGCGCCGATCGCCGCGAGCTTTCATCCGCTGCTCGCGGGGGCGGCGGATTCGTCACGGC TGCGCGGGCTGCCGATCCAGATCGTCCACGGCCGCCACGACTGGATGTTCCCGGTGGAGGTGGCCCGGCAGGCGCACGAG GCGCTTGTCTCGGCCGGCGCCGACGTCAGCTACCGCGAGATCGCCGACCTCAGCCACAGCTACCCGCGCGAGGCCAACGT CGCTCTCTTGGATTGGCTGAAGGCGCCGGCGGCGTAG
Upstream 100 bases:
>100_bases GACCTGCCGGATCACCGCTTCGCGCTCGGTTTGCGGTTTGCAGCCGGCCCGATCCCTGACACTGTCGGACCTTCGCAGAC AGAAATCGGGAAGGGATGGG
Downstream 100 bases:
>100_bases CGCTCAGGCGGTGTGCCGCGCCAACAGTGTGCGCCGGACCAGTTTCGAGGTCTGGCCGCGGTCGGCGAACAGAGCGAGCA GCAGCAGCGCCAAGCCGCCA
Product: phospholipase/carboxylesterase
Products: NA
Alternate protein names: Esterase; Serine Esterase
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSEAVIDDIVALLPPLLQSLESLGFVARYLHPPEFGDLLKLAGTPDEALQTELPRLANWPETFAHLRGPLQTAGEQALTA FAGLRAVDAGQGDLGDVFRALRHLPQALEALYPLAANLPPVSSFFLDPDSQENDKLLARLTQPKHPDSGVFHRFNEPGSR GGYSLYVPEYYDPDREWPLVMALHGGSGHGRLFLWSWLRDARARGAIVVAPTATGRTWALIGEDVDSPNLARILDEVRGH WRIDPSRLLLTGLSDGGTFCYVSGLTSDSPFTHLAPIAASFHPLLAGAADSSRLRGLPIQIVHGRHDWMFPVEVARQAHE ALVSAGADVSYREIADLSHSYPREANVALLDWLKAPAA
Sequences:
>Translated_358_residues MSEAVIDDIVALLPPLLQSLESLGFVARYLHPPEFGDLLKLAGTPDEALQTELPRLANWPETFAHLRGPLQTAGEQALTA FAGLRAVDAGQGDLGDVFRALRHLPQALEALYPLAANLPPVSSFFLDPDSQENDKLLARLTQPKHPDSGVFHRFNEPGSR GGYSLYVPEYYDPDREWPLVMALHGGSGHGRLFLWSWLRDARARGAIVVAPTATGRTWALIGEDVDSPNLARILDEVRGH WRIDPSRLLLTGLSDGGTFCYVSGLTSDSPFTHLAPIAASFHPLLAGAADSSRLRGLPIQIVHGRHDWMFPVEVARQAHE ALVSAGADVSYREIADLSHSYPREANVALLDWLKAPAA >Mature_357_residues SEAVIDDIVALLPPLLQSLESLGFVARYLHPPEFGDLLKLAGTPDEALQTELPRLANWPETFAHLRGPLQTAGEQALTAF AGLRAVDAGQGDLGDVFRALRHLPQALEALYPLAANLPPVSSFFLDPDSQENDKLLARLTQPKHPDSGVFHRFNEPGSRG GYSLYVPEYYDPDREWPLVMALHGGSGHGRLFLWSWLRDARARGAIVVAPTATGRTWALIGEDVDSPNLARILDEVRGHW RIDPSRLLLTGLSDGGTFCYVSGLTSDSPFTHLAPIAASFHPLLAGAADSSRLRGLPIQIVHGRHDWMFPVEVARQAHEA LVSAGADVSYREIADLSHSYPREANVALLDWLKAPAA
Specific function: Unknown
COG id: COG4099
COG function: function code R; Predicted peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39040; Mature: 38908
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAVIDDIVALLPPLLQSLESLGFVARYLHPPEFGDLLKLAGTPDEALQTELPRLANWP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCH ETFAHLRGPLQTAGEQALTAFAGLRAVDAGQGDLGDVFRALRHLPQALEALYPLAANLPP HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC VSSFFLDPDSQENDKLLARLTQPKHPDSGVFHRFNEPGSRGGYSLYVPEYYDPDREWPLV CHHEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEE MALHGGSGHGRLFLWSWLRDARARGAIVVAPTATGRTWALIGEDVDSPNLARILDEVRGH EEEECCCCCCCEEEHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHCCC WRIDPSRLLLTGLSDGGTFCYVSGLTSDSPFTHLAPIAASFHPLLAGAADSSRLRGLPIQ EECCHHHEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEE IVHGRHDWMFPVEVARQAHEALVSAGADVSYREIADLSHSYPREANVALLDWLKAPAA EEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure SEAVIDDIVALLPPLLQSLESLGFVARYLHPPEFGDLLKLAGTPDEALQTELPRLANWP CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCH ETFAHLRGPLQTAGEQALTAFAGLRAVDAGQGDLGDVFRALRHLPQALEALYPLAANLPP HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC VSSFFLDPDSQENDKLLARLTQPKHPDSGVFHRFNEPGSRGGYSLYVPEYYDPDREWPLV CHHEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEE MALHGGSGHGRLFLWSWLRDARARGAIVVAPTATGRTWALIGEDVDSPNLARILDEVRGH EEEECCCCCCCEEEHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHCCC WRIDPSRLLLTGLSDGGTFCYVSGLTSDSPFTHLAPIAASFHPLLAGAADSSRLRGLPIQ EECCHHHEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEE IVHGRHDWMFPVEVARQAHEALVSAGADVSYREIADLSHSYPREANVALLDWLKAPAA EEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA