| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is uvrA [H]
Identifier: 190571651
GI number: 190571651
Start: 1351517
End: 1354330
Strand: Direct
Name: uvrA [H]
Synonym: WPa_1276
Alternate gene names: 190571651
Gene position: 1351517-1354330 (Clockwise)
Preceding gene: 190571648
Following gene: 190571652
Centisome position: 91.17
GC content: 36.99
Gene sequence:
>2814_bases ATGATCAGAGTTAAAGGTGCAAGAGAGCATAATTTGCAGGGTATTGATGTCAATATACCAAAAAATAAGTTAGTTGTTAT AACTGGACTAAGTGGTTCTGGTAAGTCTAGCCTCGCATTCGATACGATTTATGCAGAAGGCCAACGCCGATACGTCGAAA GTCTATCGGCTTATGCACGTCAATTTCTTAATATTCAAGATAAACCTGACGTTGAATCGATCACAGGCCTCTCTCCTGCA ATATCAATTAACCAAAAATCGATCTCAAAAAATCCAAGATCAACTGTTGGAACCGTTACTGAAATTTATGACTATCTACG CTTAATATATGCGCGAATAGGCATTCCTTACTCACCCGCAACTGGATTGCCAATAACGAAACAGACTGTATCTCAAATTG TAGATACTATTACAGCATTACCTTTAGAAACTAAAGTATATATAATTGCTCCTATTGTACGTGGTAGAAAGGGAGAGCAT CTAAAAGAGATACTGGAAATTAAAAAGCAGGGTTACGTAAGACTAAAAATAAACGGTGAAATATGTGATATAGATGACTT GCCTAAGCTCGATAAAAACAAGAAACATGATATTTTTGTGATTGCAGATAGAGTGTCCATATCAGATGATATAGGAAATC GACTACCAAGCAGTATAGAATCAGCATTGAGACTTGCCCATGGCTTAATGTATGCAGAAATAGTTAACTTACCTGATAAC CACAATTCCGAGTATAAAAATGGTCAAACTTTAACTTTCTCAGAGAATTTTGCATGTCCTGAGTCTGGCTTTACTCTTGA AGAAATAGAGCCAAGATTGTTTTCTTTTAACAGCCCCTACGGTGCATGCAGTTCATGCAATGGGCTCGGTAAAAAGCTAA GTGTTGATGCAAAGCTAATAGTGCCAGATGAAACGCTCTCGATATCTGAAGGTGCTTTAAAGCCAATTGGATCAATATTC CTTCAAGTGCATACAAACTATGGATTGCTAAAAAATGCAATTCTGTCACTGGCTGAAAATTGCAAATTTAGTCTTGATGT TCCGTGGAAGAATATAGACCAAAAAGTGAAGGATTTAATACTTTTTGGCTCTAGAGAAATGAAATTTCAAGGTTTGGTCA GTATCCTAGAACGCCAGATGGATTACGATGCATCACTTATTGATAGGTATTGTTCTGTTACTGACTGCAAAGAATGTGCT GGCTATAGATTGAGAAAAGAAGCACTTACAGTGAAAATTGATGAAAAACACATAGGTGAAATATCAGGGCTCAGCGTCGA TGAATCCCTTGATTGGTTTGAAAATTTGCCAGACAAGCTCACAGAACAACATAAGCAAATTTCAAATAAAATATTAAACG AAATAATCAAAAGGCTGACATTTTTAAAGAATGTAGGGCTAAATTACCTTACACTTGACCGTGAATCTAGCACTCTCTCT GGTGGTGAAAGCCAGAGGATCAGGCTTGCTTCGCAAATTGGCTCTGGTTTAACAGGAGTGCTATACGTGCTTGACGAACC CTCAATTGGCCTTCATCAATGTGATAATGATCGATTAATTGCCACACTTAAAAATCTGAGAGACATGGGTAATACTGTGA TTGTTGTTGAACATGATGAAGACACAATAATGGCTGCTGATTATGTGATTGATATTGGTCCTGGAGCTGGTGTAAACGGA GGAAAAGTTGTTGCAGAAGGAACACCAGATCAGTTACAAAAAAATTCAGAGAGCATAACAGGACAGTATTTAAGTGGAAA GAAGGAAATTTCAATTTCAAAAAGAAGAAAGCAAACAACTCAGTTCATAAAGGTAGTTAATGCTTGTGAGAACAACTTAA AAAATATAAATGTTGAATTTCCTATAGGGAATTTTATTTGTGTTACTGGAATATCAGGAGGAGGGAAATCAAGTTTAGTG ATAGAAACATTATATAAATACTCAGCACACAAGATAAATCATTCATCTGCAAGGCATGGTCAATGCGACAAAATAGAAGG CCTTGAGTATATAGATAAAATTATAGAAGTTGATCAATCGCCAATTGGTAGGACCCCAGCATCAAATCCAGCAACATATG TTGGTATGTTTACTCACATCAGAAATTGGTTTGCAGGTCTCCCAGAGTCGAAGGCACGAGGTTACAATATAGGCCGATTT TCATTTAATACCAGGGGAGGAAGATGTGAAGCTTGTAAAGGTGATGGGCATTTAAAGATCGAGATGCATTTCCTACCGGA TGTTTATGTGAAATGTGAGCAATGTAGAGGACAGAGGTATAACCGAGAAACATTGGAAGTTACTTACAAGGGAAAATCAA TTTCTGATGTGCTTGATATGACAATAGATCAAGCATGTGACTTTTTTGAAAATCTTCCAATGATAAAGGAAAAGTTGATT TCTTTACAGGAAGTAGGGCTTGGCTATATAACGCTTGGACAGTCGTCAACAACGTTGTCCGGGGGTGAAGCACAACGAAT AAAGCTGTCTAAGGAACTATCAAAGCGATTTACCGGGAAAACATTGTATATTCTCGATGAGCCAACAACTGGGTTACATT TTGAAGATGTAAATAATTTACTGAAAATACTCCATAGGCTAGTTGATTTAGGAAATACTGTTATAGTTATTGAGCACAAT TTACATGTTATAAAAACTGCTGATTACATAATAGATATTGGTCCAGAGGGTGGAGTAAAAGGTGGCGAAGTGGTTGCTGT AGGAACTCCAGAAAAAGTTGCACAGACTCCAAAAAGCGTTACAGGCAAGTATCTTAAAACATATTTATTGGATCAAGTAT CGACTATTTCTTAA
Upstream 100 bases:
>100_bases AGTTGTGCTACTTCGTTTTCCGTAATAGTTGAAAAAATTAGTAGAAAGTTGTTGTAAGTTTATGTATTTTGAGGCTGTAA TGGTCAAAGGTACATGAAGT
Downstream 100 bases:
>100_bases TAATTAGGTTATGAGGAGCATTTTAAAAGGTATACCTAACATATTTAATTCATGAATCTTCTCTTATTAAAAAAAGCTAC AGATCTCATATTTCCAAACG
Product: excinuclease ABC, A subunit
Products: NA
Alternate protein names: UvrA protein; Excinuclease ABC subunit A [H]
Number of amino acids: Translated: 937; Mature: 937
Protein sequence:
>937_residues MIRVKGAREHNLQGIDVNIPKNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLNIQDKPDVESITGLSPA ISINQKSISKNPRSTVGTVTEIYDYLRLIYARIGIPYSPATGLPITKQTVSQIVDTITALPLETKVYIIAPIVRGRKGEH LKEILEIKKQGYVRLKINGEICDIDDLPKLDKNKKHDIFVIADRVSISDDIGNRLPSSIESALRLAHGLMYAEIVNLPDN HNSEYKNGQTLTFSENFACPESGFTLEEIEPRLFSFNSPYGACSSCNGLGKKLSVDAKLIVPDETLSISEGALKPIGSIF LQVHTNYGLLKNAILSLAENCKFSLDVPWKNIDQKVKDLILFGSREMKFQGLVSILERQMDYDASLIDRYCSVTDCKECA GYRLRKEALTVKIDEKHIGEISGLSVDESLDWFENLPDKLTEQHKQISNKILNEIIKRLTFLKNVGLNYLTLDRESSTLS GGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQCDNDRLIATLKNLRDMGNTVIVVEHDEDTIMAADYVIDIGPGAGVNG GKVVAEGTPDQLQKNSESITGQYLSGKKEISISKRRKQTTQFIKVVNACENNLKNINVEFPIGNFICVTGISGGGKSSLV IETLYKYSAHKINHSSARHGQCDKIEGLEYIDKIIEVDQSPIGRTPASNPATYVGMFTHIRNWFAGLPESKARGYNIGRF SFNTRGGRCEACKGDGHLKIEMHFLPDVYVKCEQCRGQRYNRETLEVTYKGKSISDVLDMTIDQACDFFENLPMIKEKLI SLQEVGLGYITLGQSSTTLSGGEAQRIKLSKELSKRFTGKTLYILDEPTTGLHFEDVNNLLKILHRLVDLGNTVIVIEHN LHVIKTADYIIDIGPEGGVKGGEVVAVGTPEKVAQTPKSVTGKYLKTYLLDQVSTIS
Sequences:
>Translated_937_residues MIRVKGAREHNLQGIDVNIPKNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLNIQDKPDVESITGLSPA ISINQKSISKNPRSTVGTVTEIYDYLRLIYARIGIPYSPATGLPITKQTVSQIVDTITALPLETKVYIIAPIVRGRKGEH LKEILEIKKQGYVRLKINGEICDIDDLPKLDKNKKHDIFVIADRVSISDDIGNRLPSSIESALRLAHGLMYAEIVNLPDN HNSEYKNGQTLTFSENFACPESGFTLEEIEPRLFSFNSPYGACSSCNGLGKKLSVDAKLIVPDETLSISEGALKPIGSIF LQVHTNYGLLKNAILSLAENCKFSLDVPWKNIDQKVKDLILFGSREMKFQGLVSILERQMDYDASLIDRYCSVTDCKECA GYRLRKEALTVKIDEKHIGEISGLSVDESLDWFENLPDKLTEQHKQISNKILNEIIKRLTFLKNVGLNYLTLDRESSTLS GGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQCDNDRLIATLKNLRDMGNTVIVVEHDEDTIMAADYVIDIGPGAGVNG GKVVAEGTPDQLQKNSESITGQYLSGKKEISISKRRKQTTQFIKVVNACENNLKNINVEFPIGNFICVTGISGGGKSSLV IETLYKYSAHKINHSSARHGQCDKIEGLEYIDKIIEVDQSPIGRTPASNPATYVGMFTHIRNWFAGLPESKARGYNIGRF SFNTRGGRCEACKGDGHLKIEMHFLPDVYVKCEQCRGQRYNRETLEVTYKGKSISDVLDMTIDQACDFFENLPMIKEKLI SLQEVGLGYITLGQSSTTLSGGEAQRIKLSKELSKRFTGKTLYILDEPTTGLHFEDVNNLLKILHRLVDLGNTVIVIEHN LHVIKTADYIIDIGPEGGVKGGEVVAVGTPEKVAQTPKSVTGKYLKTYLLDQVSTIS >Mature_937_residues MIRVKGAREHNLQGIDVNIPKNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLNIQDKPDVESITGLSPA ISINQKSISKNPRSTVGTVTEIYDYLRLIYARIGIPYSPATGLPITKQTVSQIVDTITALPLETKVYIIAPIVRGRKGEH LKEILEIKKQGYVRLKINGEICDIDDLPKLDKNKKHDIFVIADRVSISDDIGNRLPSSIESALRLAHGLMYAEIVNLPDN HNSEYKNGQTLTFSENFACPESGFTLEEIEPRLFSFNSPYGACSSCNGLGKKLSVDAKLIVPDETLSISEGALKPIGSIF LQVHTNYGLLKNAILSLAENCKFSLDVPWKNIDQKVKDLILFGSREMKFQGLVSILERQMDYDASLIDRYCSVTDCKECA GYRLRKEALTVKIDEKHIGEISGLSVDESLDWFENLPDKLTEQHKQISNKILNEIIKRLTFLKNVGLNYLTLDRESSTLS GGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQCDNDRLIATLKNLRDMGNTVIVVEHDEDTIMAADYVIDIGPGAGVNG GKVVAEGTPDQLQKNSESITGQYLSGKKEISISKRRKQTTQFIKVVNACENNLKNINVEFPIGNFICVTGISGGGKSSLV IETLYKYSAHKINHSSARHGQCDKIEGLEYIDKIIEVDQSPIGRTPASNPATYVGMFTHIRNWFAGLPESKARGYNIGRF SFNTRGGRCEACKGDGHLKIEMHFLPDVYVKCEQCRGQRYNRETLEVTYKGKSISDVLDMTIDQACDFFENLPMIKEKLI SLQEVGLGYITLGQSSTTLSGGEAQRIKLSKELSKRFTGKTLYILDEPTTGLHFEDVNNLLKILHRLVDLGNTVIVIEHN LHVIKTADYIIDIGPEGGVKGGEVVAVGTPEKVAQTPKSVTGKYLKTYLLDQVSTIS
Specific function: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion h
COG id: COG0178
COG function: function code L; Excinuclease ATPase subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Escherichia coli, GI2367343, Length=954, Percent_Identity=53.7735849056604, Blast_Score=1015, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR013815 - InterPro: IPR004602 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 103698; Mature: 103698
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVKGAREHNLQGIDVNIPKNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYAR CEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH QFLNIQDKPDVESITGLSPAISINQKSISKNPRSTVGTVTEIYDYLRLIYARIGIPYSPA HHCCCCCCCCHHHHCCCCCEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC TGLPITKQTVSQIVDTITALPLETKVYIIAPIVRGRKGEHLKEILEIKKQGYVRLKINGE CCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCC ICDIDDLPKLDKNKKHDIFVIADRVSISDDIGNRLPSSIESALRLAHGLMYAEIVNLPDN EECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC HNSEYKNGQTLTFSENFACPESGFTLEEIEPRLFSFNSPYGACSSCNGLGKKLSVDAKLI CCCCCCCCCEEEEECCCCCCCCCCCHHHCCCHHEECCCCCCCCCCCCCCCCEEECCEEEE VPDETLSISEGALKPIGSIFLQVHTNYGLLKNAILSLAENCKFSLDVPWKNIDQKVKDLI ECCCCCCCCCCCHHHHHEEEEEEECCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHH LFGSREMKFQGLVSILERQMDYDASLIDRYCSVTDCKECAGYRLRKEALTVKIDEKHIGE HCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCEEECCEEEEEECHHHCCC ISGLSVDESLDWFENLPDKLTEQHKQISNKILNEIIKRLTFLKNVGLNYLTLDRESSTLS CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC GGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQCDNDRLIATLKNLRDMGNTVIVVEHDE CCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCCHHHHHHHHHHHCCCEEEEEECCC DTIMAADYVIDIGPGAGVNGGKVVAEGTPDQLQKNSESITGQYLSGKKEISISKRRKQTT CCEEEEEEEEECCCCCCCCCCEEEECCCHHHHHCCCHHHCHHHHCCCCCCCHHHHHHHHH QFIKVVNACENNLKNINVEFPIGNFICVTGISGGGKSSLVIETLYKYSAHKINHSSARHG HHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC QCDKIEGLEYIDKIIEVDQSPIGRTPASNPATYVGMFTHIRNWFAGLPESKARGYNIGRF CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEE SFNTRGGRCEACKGDGHLKIEMHFLPDVYVKCEQCRGQRYNRETLEVTYKGKSISDVLDM EECCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHH TIDQACDFFENLPMIKEKLISLQEVGLGYITLGQSSTTLSGGEAQRIKLSKELSKRFTGK HHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHEEHHHHHHHHCCCC TLYILDEPTTGLHFEDVNNLLKILHRLVDLGNTVIVIEHNLHVIKTADYIIDIGPEGGVK EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEEEEEECCCCCCC GGEVVAVGTPEKVAQTPKSVTGKYLKTYLLDQVSTIS CCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIRVKGAREHNLQGIDVNIPKNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYAR CEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH QFLNIQDKPDVESITGLSPAISINQKSISKNPRSTVGTVTEIYDYLRLIYARIGIPYSPA HHCCCCCCCCHHHHCCCCCEEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC TGLPITKQTVSQIVDTITALPLETKVYIIAPIVRGRKGEHLKEILEIKKQGYVRLKINGE CCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCEEEEEECCC ICDIDDLPKLDKNKKHDIFVIADRVSISDDIGNRLPSSIESALRLAHGLMYAEIVNLPDN EECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC HNSEYKNGQTLTFSENFACPESGFTLEEIEPRLFSFNSPYGACSSCNGLGKKLSVDAKLI CCCCCCCCCEEEEECCCCCCCCCCCHHHCCCHHEECCCCCCCCCCCCCCCCEEECCEEEE VPDETLSISEGALKPIGSIFLQVHTNYGLLKNAILSLAENCKFSLDVPWKNIDQKVKDLI ECCCCCCCCCCCHHHHHEEEEEEECCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHH LFGSREMKFQGLVSILERQMDYDASLIDRYCSVTDCKECAGYRLRKEALTVKIDEKHIGE HCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHCCEEECCEEEEEECHHHCCC ISGLSVDESLDWFENLPDKLTEQHKQISNKILNEIIKRLTFLKNVGLNYLTLDRESSTLS CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC GGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQCDNDRLIATLKNLRDMGNTVIVVEHDE CCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCCHHHHHHHHHHHCCCEEEEEECCC DTIMAADYVIDIGPGAGVNGGKVVAEGTPDQLQKNSESITGQYLSGKKEISISKRRKQTT CCEEEEEEEEECCCCCCCCCCEEEECCCHHHHHCCCHHHCHHHHCCCCCCCHHHHHHHHH QFIKVVNACENNLKNINVEFPIGNFICVTGISGGGKSSLVIETLYKYSAHKINHSSARHG HHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC QCDKIEGLEYIDKIIEVDQSPIGRTPASNPATYVGMFTHIRNWFAGLPESKARGYNIGRF CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEE SFNTRGGRCEACKGDGHLKIEMHFLPDVYVKCEQCRGQRYNRETLEVTYKGKSISDVLDM EECCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHH TIDQACDFFENLPMIKEKLISLQEVGLGYITLGQSSTTLSGGEAQRIKLSKELSKRFTGK HHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHEEHHHHHHHHCCCC TLYILDEPTTGLHFEDVNNLLKILHRLVDLGNTVIVIEHNLHVIKTADYIIDIGPEGGVK EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEEEEEECCCCCCC GGEVVAVGTPEKVAQTPKSVTGKYLKTYLLDQVSTIS CCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]