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The map label for this gene is yajC [C]

Identifier: 190571618

GI number: 190571618

Start: 1314591

End: 1315004

Strand: Reverse

Name: yajC [C]

Synonym: WPa_1242

Alternate gene names: 190571618

Gene position: 1315004-1314591 (Counterclockwise)

Preceding gene: 190571624

Following gene: 190571617

Centisome position: 88.7

GC content: 29.71

Gene sequence:

>414_bases
ATGTTCATTTCTGAGGTTTTTGCGGCAGATGCGACTAACAATGTATCAGCATCTGTTGCTAGCTTTATTCCACTCATTTT
AATATTTGTAGTATTTTATTTTCTCATTATTCGTCCCAATCACAAAAAACTAAAAGAACATAGAAGGATGATAGATCAAA
TAAAACGTGGTGATACGGTTATTACTTCTAGTGGAATAATAGGTGAAGTAAACAAAGTTGACGAAGTAAATGCACAACTA
ATACTAGAAATAGCACCAAAAATTGAAATAAAAATCCTAAAGTCTGCTATATCTGAAATCTTAAATAAAGAAATTCAAAA
GCCAGTAGCTAAATCTATTGAAAAAAGCAAAGTTGAAAAGAATGGCAAGAAAAATAAACTAGAGGAAAGTAAAAAAGACA
AAAATGCTTCATAA

Upstream 100 bases:

>100_bases
CTTTCTTATTAATTTGAATTAATTTCTTTCAGAGACTTGACATGATATTGTAATTGCTGCTTAATCTATTTAACTTTATC
GTTAATAATTAGGATTAAAT

Downstream 100 bases:

>100_bases
TTTAAGAAGTGTGTGGAATATTAGGTATAGTAAGTAGCGGTGATTCAGTAATACCAACTTTACTAACCGCGTTGCAAAAA
TTGGAATACAGAGGTTATGA

Product: preprotein translocase, YajC subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MFISEVFAADATNNVSASVASFIPLILIFVVFYFLIIRPNHKKLKEHRRMIDQIKRGDTVITSSGIIGEVNKVDEVNAQL
ILEIAPKIEIKILKSAISEILNKEIQKPVAKSIEKSKVEKNGKKNKLEESKKDKNAS

Sequences:

>Translated_137_residues
MFISEVFAADATNNVSASVASFIPLILIFVVFYFLIIRPNHKKLKEHRRMIDQIKRGDTVITSSGIIGEVNKVDEVNAQL
ILEIAPKIEIKILKSAISEILNKEIQKPVAKSIEKSKVEKNGKKNKLEESKKDKNAS
>Mature_137_residues
MFISEVFAADATNNVSASVASFIPLILIFVVFYFLIIRPNHKKLKEHRRMIDQIKRGDTVITSSGIIGEVNKVDEVNAQL
ILEIAPKIEIKILKSAISEILNKEIQKPVAKSIEKSKVEKNGKKNKLEESKKDKNAS

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=106, Percent_Identity=32.0754716981132, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 15373; Mature: 15373

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFISEVFAADATNNVSASVASFIPLILIFVVFYFLIIRPNHKKLKEHRRMIDQIKRGDTV
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEE
ITSSGIIGEVNKVDEVNAQLILEIAPKIEIKILKSAISEILNKEIQKPVAKSIEKSKVEK
EECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGKKNKLEESKKDKNAS
CCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MFISEVFAADATNNVSASVASFIPLILIFVVFYFLIIRPNHKKLKEHRRMIDQIKRGDTV
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEE
ITSSGIIGEVNKVDEVNAQLILEIAPKIEIKILKSAISEILNKEIQKPVAKSIEKSKVEK
EECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGKKNKLEESKKDKNAS
CCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA