Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190571501
Identifier: 190571501
GI number: 190571501
Start: 1200575
End: 1201066
Strand: Direct
Name: 190571501
Synonym: WPa_1119
Alternate gene names: NA
Gene position: 1200575-1201066 (Clockwise)
Preceding gene: 190571499
Following gene: 190571507
Centisome position: 80.99
GC content: 28.86
Gene sequence:
>492_bases ATGTCAGATGATGAGTTAGATTGGCAAAAAAATGTTAAGCCAATAGAATGTGGAAAAGTTACTTTGAAAGTTGATCACAA AGTAAATATAAAATCTATGATTGATAAAGGTGCCTCTAGTTTACAAGAAAATTTTCTTAATACTGATAATGGTGATTCAT CATTTTGTCTTGACTACAATACAAAATTAAAGATCGATAGGGGCAAATATTTTATAAGCGATAAACTCGATTTGCATGGC TATAGTATAGATAATGCTTATTGTAAATTGATAGATTTTATTATCAAAAATTATCAAGCAAGGAATAGGTGCTTATTGGT AATTACGGGGCATGGTAATAGTACAGATAAAATAGACACTATAAAGAATAGCTTAAATAAGTGGTTGAATGACACAAAAG TTCGAAATATGATCTTATACTATCAGCAAGCCATAAAAAAACATGGTGGCAAAGGAGCTTTTTATGTCTTATTAAGAAGA AATAAAGGTTAA
Upstream 100 bases:
>100_bases GATTTCATCTCATTATTGAAAATCAGTTTTTTATAGAATAAGCAATATTTTACTGTGTTTATATATTGTTGTAAAATTAT GCAGTTCAATTAATGAATTT
Downstream 100 bases:
>100_bases TTTTAGAGTACCTATTTAGGAGTACCTTTCTTAGAATTCACGTGTTGAAGAATGATTTCTGCTAAACCTTTACTAATTCC AGGTACGTTTTGAATTTCAG
Product: Smr domain family protein
Products: NA
Alternate protein names: Smr Domain Protein; DNA Repair Protein Smr/MutS Family; Smr/MutS Family Protein; Smr/MutS Family DNA Repair Protein; Smr Family Protein; DNA Repair Protein; Smr Protein/Muts2-Like; Smr Protein/MutS2 Domain Protein; Smr Protein/MutS2 C-Terminal; Smr Protein; Smr Domain Family Protein
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSDDELDWQKNVKPIECGKVTLKVDHKVNIKSMIDKGASSLQENFLNTDNGDSSFCLDYNTKLKIDRGKYFISDKLDLHG YSIDNAYCKLIDFIIKNYQARNRCLLVITGHGNSTDKIDTIKNSLNKWLNDTKVRNMILYYQQAIKKHGGKGAFYVLLRR NKG
Sequences:
>Translated_163_residues MSDDELDWQKNVKPIECGKVTLKVDHKVNIKSMIDKGASSLQENFLNTDNGDSSFCLDYNTKLKIDRGKYFISDKLDLHG YSIDNAYCKLIDFIIKNYQARNRCLLVITGHGNSTDKIDTIKNSLNKWLNDTKVRNMILYYQQAIKKHGGKGAFYVLLRR NKG >Mature_162_residues SDDELDWQKNVKPIECGKVTLKVDHKVNIKSMIDKGASSLQENFLNTDNGDSSFCLDYNTKLKIDRGKYFISDKLDLHGY SIDNAYCKLIDFIIKNYQARNRCLLVITGHGNSTDKIDTIKNSLNKWLNDTKVRNMILYYQQAIKKHGGKGAFYVLLRRN KG
Specific function: Unknown
COG id: COG2840
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18744; Mature: 18613
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS50828 SMR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDELDWQKNVKPIECGKVTLKVDHKVNIKSMIDKGASSLQENFLNTDNGDSSFCLDYN CCCCCCCHHHCCCEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC TKLKIDRGKYFISDKLDLHGYSIDNAYCKLIDFIIKNYQARNRCLLVITGHGNSTDKIDT CEEEEECCEEEEECCEEECEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHH IKNSLNKWLNDTKVRNMILYYQQAIKKHGGKGAFYVLLRRNKG HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC >Mature Secondary Structure SDDELDWQKNVKPIECGKVTLKVDHKVNIKSMIDKGASSLQENFLNTDNGDSSFCLDYN CCCCCCHHHCCCEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC TKLKIDRGKYFISDKLDLHGYSIDNAYCKLIDFIIKNYQARNRCLLVITGHGNSTDKIDT CEEEEECCEEEEECCEEECEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHH IKNSLNKWLNDTKVRNMILYYQQAIKKHGGKGAFYVLLRRNKG HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA