Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190571499
Identifier: 190571499
GI number: 190571499
Start: 1198314
End: 1199624
Strand: Direct
Name: 190571499
Synonym: WPa_1117
Alternate gene names: NA
Gene position: 1198314-1199624 (Clockwise)
Preceding gene: 190571498
Following gene: 190571501
Centisome position: 80.83
GC content: 36.31
Gene sequence:
>1311_bases ATGGCTAGTTTAACTTTTAAAGACAACTCTGGAGGAAATGTACCATCCCCTAACATTAAAAGCATAATTTATGAAGATGC TGCACAGAATAAGTATACCTTTGGTGTAGACAATGCTACTAATGTTTTCAACACTTTTAAGTATGAACCTAATGGTGCTG CTGAAATAGATTACAGTGCTACAGCAACAAAGTTCATGACTGGAGGTGCAATTGCTACATTATTAGGTATTGGAACTAAT GTAGATGCAATAAAAACTAAGACTGATTCTATTCCAGCTGACTTAAGCGCTGACTTAGTTACCATAAAAACTCAAGTCGG AACAGATCTGATATCAGGAATAAAGGCTAAGACTGATAAGATTACAGATACCTTAGGAGCTGATGTCACTGCTATAAAGG CTAAAACTGATACTATTCCAGCTGACTTAACAGCTAAAGTAACTGCTATAGAAACTGCTACAAATTCTGCTAATTTAGGA GATAAAGTTACTGCAATACAAACTAAGACTGATAAGATTACAGATACCTTAGGAGCTGATGTCACTGCTATAAAGGCTAA GACTGATAAGATGCCTGCTGATTTAGGAACTGAGTTAGGTAATTTAGCTAAATCTGCTGATGTTACTGCTATAAAGGCTA AAACTGATACTATTCCAGCTGACTTAACAGCTAAAGTAACTGCTATAGAAACTGCTACAAATTCTGCTAATTTAGGAGAT AAGGTTACTGCAATACAAACTAAGACTGATAAGATTACAGATACCTTAGGAGCTGATGTCACTGCTATAAAGGCTAAGAC TGATAAGATGCCTGCTGATTTAGGAACTGAGTTAGGTAATTTAGCTAAATCTGCTGAACTAGCTCCTTTAGCTAAATCTG CTGATGTTACTGCTATAAAGGCTAAAACTGATACTATTCCAGCTGACTTAACAGCTAAAGTAACTGCTATAGAAACTGCT ACAAATTCTGCTAATTTAGGAGATAAGGTTACTGCAATACAAACTAAGACTGATAAGATTACAGATACCTTAGGAGCTGA TGTCACTGCTATAAAGGCTAAGACTGATAAGATGCCTGCTGACTTAAACGCTGAGTTAATTAAGTTAACTACAATAGGAA ATGCTATAAATGGTAATGGTAACGTCACTGAAGCTGCTAAAGCTGTACTAGAGAGCAGTTTCAAGAAAGCTATTAAAGAA GCTGGAGAAGATGGTAGCGAATGGCTTAAAAATGAGATAAAAGAGATAGTGTCACAGCCATCCTTCGAGATTCCAACAGA TTCAAGTTCACCTCTTTCTTGGGATTGGTAA
Upstream 100 bases:
>100_bases AAGCGAAAAGCTTCAAGGAAATCTTATGCAAAATCTAGTATTTACGGAATTTATATTATTTTCATGCACATTATGGTTTT TATAATTAACGGAAAGTGAT
Downstream 100 bases:
>100_bases TGTAAGTGCTAGTGAATGACATCGCAAGATGTCATTCACTGTTGTCATTCCAGTATCACATGCTGGAATGACATCCTTGT TTTATTGCAACTAATTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MASLTFKDNSGGNVPSPNIKSIIYEDAAQNKYTFGVDNATNVFNTFKYEPNGAAEIDYSATATKFMTGGAIATLLGIGTN VDAIKTKTDSIPADLSADLVTIKTQVGTDLISGIKAKTDKITDTLGADVTAIKAKTDTIPADLTAKVTAIETATNSANLG DKVTAIQTKTDKITDTLGADVTAIKAKTDKMPADLGTELGNLAKSADVTAIKAKTDTIPADLTAKVTAIETATNSANLGD KVTAIQTKTDKITDTLGADVTAIKAKTDKMPADLGTELGNLAKSAELAPLAKSADVTAIKAKTDTIPADLTAKVTAIETA TNSANLGDKVTAIQTKTDKITDTLGADVTAIKAKTDKMPADLNAELIKLTTIGNAINGNGNVTEAAKAVLESSFKKAIKE AGEDGSEWLKNEIKEIVSQPSFEIPTDSSSPLSWDW
Sequences:
>Translated_436_residues MASLTFKDNSGGNVPSPNIKSIIYEDAAQNKYTFGVDNATNVFNTFKYEPNGAAEIDYSATATKFMTGGAIATLLGIGTN VDAIKTKTDSIPADLSADLVTIKTQVGTDLISGIKAKTDKITDTLGADVTAIKAKTDTIPADLTAKVTAIETATNSANLG DKVTAIQTKTDKITDTLGADVTAIKAKTDKMPADLGTELGNLAKSADVTAIKAKTDTIPADLTAKVTAIETATNSANLGD KVTAIQTKTDKITDTLGADVTAIKAKTDKMPADLGTELGNLAKSAELAPLAKSADVTAIKAKTDTIPADLTAKVTAIETA TNSANLGDKVTAIQTKTDKITDTLGADVTAIKAKTDKMPADLNAELIKLTTIGNAINGNGNVTEAAKAVLESSFKKAIKE AGEDGSEWLKNEIKEIVSQPSFEIPTDSSSPLSWDW >Mature_435_residues ASLTFKDNSGGNVPSPNIKSIIYEDAAQNKYTFGVDNATNVFNTFKYEPNGAAEIDYSATATKFMTGGAIATLLGIGTNV DAIKTKTDSIPADLSADLVTIKTQVGTDLISGIKAKTDKITDTLGADVTAIKAKTDTIPADLTAKVTAIETATNSANLGD KVTAIQTKTDKITDTLGADVTAIKAKTDKMPADLGTELGNLAKSADVTAIKAKTDTIPADLTAKVTAIETATNSANLGDK VTAIQTKTDKITDTLGADVTAIKAKTDKMPADLGTELGNLAKSAELAPLAKSADVTAIKAKTDTIPADLTAKVTAIETAT NSANLGDKVTAIQTKTDKITDTLGADVTAIKAKTDKMPADLNAELIKLTTIGNAINGNGNVTEAAKAVLESSFKKAIKEA GEDGSEWLKNEIKEIVSQPSFEIPTDSSSPLSWDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45205; Mature: 45074
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLTFKDNSGGNVPSPNIKSIIYEDAAQNKYTFGVDNATNVFNTFKYEPNGAAEIDYSA CCEEEEECCCCCCCCCCCHHHHEEHHCCCCCEEECCCCCHHHHHEEEECCCCCCEEECCC TATKFMTGGAIATLLGIGTNVDAIKTKTDSIPADLSADLVTIKTQVGTDLISGIKAKTDK HHHHHHCCCHHHHHHHCCCCCHHEEECCCCCCCCCCCCEEEEEHHHCHHHHHHHHHHHHH ITDTLGADVTAIKAKTDTIPADLTAKVTAIETATNSANLGDKVTAIQTKTDKITDTLGAD HHHHHCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCHHHHHHHCCC VTAIKAKTDKMPADLGTELGNLAKSADVTAIKAKTDTIPADLTAKVTAIETATNSANLGD EEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCC KVTAIQTKTDKITDTLGADVTAIKAKTDKMPADLGTELGNLAKSAELAPLAKSADVTAIK EEEEEEECCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHCCCCCCCCEEEEE AKTDTIPADLTAKVTAIETATNSANLGDKVTAIQTKTDKITDTLGADVTAIKAKTDKMPA ECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCHHHHHHHCCCEEEEEECCCCCCC DLNAELIKLTTIGNAINGNGNVTEAAKAVLESSFKKAIKEAGEDGSEWLKNEIKEIVSQP CCCCEEEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC SFEIPTDSSSPLSWDW CCCCCCCCCCCCCCCC >Mature Secondary Structure ASLTFKDNSGGNVPSPNIKSIIYEDAAQNKYTFGVDNATNVFNTFKYEPNGAAEIDYSA CEEEEECCCCCCCCCCCHHHHEEHHCCCCCEEECCCCCHHHHHEEEECCCCCCEEECCC TATKFMTGGAIATLLGIGTNVDAIKTKTDSIPADLSADLVTIKTQVGTDLISGIKAKTDK HHHHHHCCCHHHHHHHCCCCCHHEEECCCCCCCCCCCCEEEEEHHHCHHHHHHHHHHHHH ITDTLGADVTAIKAKTDTIPADLTAKVTAIETATNSANLGDKVTAIQTKTDKITDTLGAD HHHHHCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCHHHHHHHCCC VTAIKAKTDKMPADLGTELGNLAKSADVTAIKAKTDTIPADLTAKVTAIETATNSANLGD EEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCC KVTAIQTKTDKITDTLGADVTAIKAKTDKMPADLGTELGNLAKSAELAPLAKSADVTAIK EEEEEEECCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHCCCCCCCCEEEEE AKTDTIPADLTAKVTAIETATNSANLGDKVTAIQTKTDKITDTLGADVTAIKAKTDKMPA ECCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCHHHHHHHCCCEEEEEECCCCCCC DLNAELIKLTTIGNAINGNGNVTEAAKAVLESSFKKAIKEAGEDGSEWLKNEIKEIVSQP CCCCEEEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC SFEIPTDSSSPLSWDW CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA