| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is cshA [H]
Identifier: 190571463
GI number: 190571463
Start: 1147201
End: 1148427
Strand: Direct
Name: cshA [H]
Synonym: WPa_1078
Alternate gene names: 190571463
Gene position: 1147201-1148427 (Clockwise)
Preceding gene: 190571462
Following gene: 190571464
Centisome position: 77.39
GC content: 38.55
Gene sequence:
>1227_bases GTGAGTAATTTTCATGAAATGGGGCTTCCAACTTTGCTTAGGCAAGCTCTAAGTAAAAATAATCTTTGTGTTCCAACCCC GATTCAGGTGCAAGCGATTCCTCTAGCTCTTCAGGGCAAAGATATTCTTGGGTCTGCTCAAACGGGAACTGGAAAAACCT TAGCGTTTGCTATTCCACTGGTTGCTAAATTGATGAATGAGCCAAGCATTGGTTCAGCTTTAGTCATCGTGCCAACCAGA GAGCTTGCTCATCAGGTAACAAGTGAGATAAGAAAACTCTTATCTCAAAGTTCTTTACTAAGAGTTGCTTTGTTGATCGG AGGCGAGCCTATTTTTAGGCAGCTAAATCAGCTTCAGAAAAAACCACAAATTATAATAGGTACTCCTGGTCGTATTATAG ACCATATTGAGCGTAAAACTTTAGTTACTCGGAATGTTGGTATTCTTGTGCTTGATGAGACGGATCGTATGTTTGATATG GGCTTTGGAATTCAGATTGAAGAAATTATGAAGCATTTGCCTAAAATAAGGCAAACTCTTATGTTTTCTGCAACTCTTCC TGGAGAAATAGTAAAACTTACTGAAAAATATCTTAATCAACCAGAGCGTGTTTCTGTCGATTGCCAGGCTACAACTTCTG TAAAAATTAAACAAGAAGTTGTTTATGCATCAGAATCAGAAAAATATGGCAAGCTTGTTACACAATTATGTCAGCGCAAA GGATCAATCATTATTTTTGTCAAAACAAAGCGAGGAGCGGATCAGCTAGCTGACAAATTGCACAAAGATGACTATAGCGC TTTGGCAATTCATGGTGATTTAAGGCAGCACAAGCGTGAAAGAGTCATTGATTCTTTTCGTCGTGGCCGCAATCAAATCA TGGTTGCAACAGATGTTGCTTCTCGCGGTCTTGATATTCCGCACATTCAACATGTTATCAATTATGATGTACCACAATCG CAAGCTGATTATGTTCATCGTATAGGTAGAACTGCACGTGCGGGAGCTGAAGGATTTGCATTATCTTTTGTTACACCTCA AGATAAGAGAAGACTGCCTGCACTAGCAGATAAAGAAGGAGAGCCAAATTTTGATTGTAGTATGCAATCTCAAAAACGTA ACAGCAAAAAGATCTTTAAAAGGCCAAGTACGTTAAAGGCTAAATACGGTAGAAAAAAGATCAATGTATTTAAGAAGAAA AGCAGAGTACTAGAAAAAGCGTATTAA
Upstream 100 bases:
>100_bases AAAGAAGAGCGTGGTAGGAACGGAGAAGATAAAAAGTCTGCAATAAATTTAAGATTGGAAGATTAGTCTATCGTGAAGCT TTTTAATAGGGTAATGTATT
Downstream 100 bases:
>100_bases TGTACTTAACTATTCTTCTATTCTTTAAAAGCTCCAGTAAACTTGCTGCAAAGTGAAGTGATTGGAGGATGGTAGAAAGA ATATATAGCTAGCCCAAATT
Product: ATP-dependent RNA helicase, DeaD/DeaH box family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MSNFHEMGLPTLLRQALSKNNLCVPTPIQVQAIPLALQGKDILGSAQTGTGKTLAFAIPLVAKLMNEPSIGSALVIVPTR ELAHQVTSEIRKLLSQSSLLRVALLIGGEPIFRQLNQLQKKPQIIIGTPGRIIDHIERKTLVTRNVGILVLDETDRMFDM GFGIQIEEIMKHLPKIRQTLMFSATLPGEIVKLTEKYLNQPERVSVDCQATTSVKIKQEVVYASESEKYGKLVTQLCQRK GSIIIFVKTKRGADQLADKLHKDDYSALAIHGDLRQHKRERVIDSFRRGRNQIMVATDVASRGLDIPHIQHVINYDVPQS QADYVHRIGRTARAGAEGFALSFVTPQDKRRLPALADKEGEPNFDCSMQSQKRNSKKIFKRPSTLKAKYGRKKINVFKKK SRVLEKAY
Sequences:
>Translated_408_residues MSNFHEMGLPTLLRQALSKNNLCVPTPIQVQAIPLALQGKDILGSAQTGTGKTLAFAIPLVAKLMNEPSIGSALVIVPTR ELAHQVTSEIRKLLSQSSLLRVALLIGGEPIFRQLNQLQKKPQIIIGTPGRIIDHIERKTLVTRNVGILVLDETDRMFDM GFGIQIEEIMKHLPKIRQTLMFSATLPGEIVKLTEKYLNQPERVSVDCQATTSVKIKQEVVYASESEKYGKLVTQLCQRK GSIIIFVKTKRGADQLADKLHKDDYSALAIHGDLRQHKRERVIDSFRRGRNQIMVATDVASRGLDIPHIQHVINYDVPQS QADYVHRIGRTARAGAEGFALSFVTPQDKRRLPALADKEGEPNFDCSMQSQKRNSKKIFKRPSTLKAKYGRKKINVFKKK SRVLEKAY >Mature_407_residues SNFHEMGLPTLLRQALSKNNLCVPTPIQVQAIPLALQGKDILGSAQTGTGKTLAFAIPLVAKLMNEPSIGSALVIVPTRE LAHQVTSEIRKLLSQSSLLRVALLIGGEPIFRQLNQLQKKPQIIIGTPGRIIDHIERKTLVTRNVGILVLDETDRMFDMG FGIQIEEIMKHLPKIRQTLMFSATLPGEIVKLTEKYLNQPERVSVDCQATTSVKIKQEVVYASESEKYGKLVTQLCQRKG SIIIFVKTKRGADQLADKLHKDDYSALAIHGDLRQHKRERVIDSFRRGRNQIMVATDVASRGLDIPHIQHVINYDVPQSQ ADYVHRIGRTARAGAEGFALSFVTPQDKRRLPALADKEGEPNFDCSMQSQKRNSKKIFKRPSTLKAKYGRKKINVFKKKS RVLEKAY
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI148613856, Length=353, Percent_Identity=41.9263456090652, Blast_Score=275, Evalue=8e-74, Organism=Homo sapiens, GI38201710, Length=353, Percent_Identity=41.9263456090652, Blast_Score=275, Evalue=8e-74, Organism=Homo sapiens, GI4758138, Length=363, Percent_Identity=38.8429752066116, Blast_Score=265, Evalue=4e-71, Organism=Homo sapiens, GI20149629, Length=348, Percent_Identity=41.0919540229885, Blast_Score=262, Evalue=4e-70, Organism=Homo sapiens, GI45446747, Length=356, Percent_Identity=39.8876404494382, Blast_Score=260, Evalue=1e-69, Organism=Homo sapiens, GI45446743, Length=356, Percent_Identity=39.8876404494382, Blast_Score=260, Evalue=1e-69, Organism=Homo sapiens, GI41327771, Length=384, Percent_Identity=38.28125, Blast_Score=252, Evalue=4e-67, Organism=Homo sapiens, GI41327773, Length=360, Percent_Identity=39.4444444444444, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=38.268156424581, Blast_Score=249, Evalue=4e-66, Organism=Homo sapiens, GI87196351, Length=349, Percent_Identity=40.6876790830946, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI301171467, Length=349, Percent_Identity=40.6876790830946, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI301171475, Length=349, Percent_Identity=40.6876790830946, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI188035877, Length=360, Percent_Identity=35.8333333333333, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI169881239, Length=374, Percent_Identity=37.9679144385027, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI13514809, Length=374, Percent_Identity=37.9679144385027, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI222352149, Length=337, Percent_Identity=41.5430267062315, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI31542656, Length=358, Percent_Identity=37.9888268156425, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI7661920, Length=357, Percent_Identity=36.6946778711485, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI262118318, Length=365, Percent_Identity=36.986301369863, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI216548263, Length=365, Percent_Identity=36.986301369863, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI13518015, Length=365, Percent_Identity=36.986301369863, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI262231852, Length=365, Percent_Identity=36.986301369863, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI41327776, Length=347, Percent_Identity=37.7521613832853, Blast_Score=227, Evalue=1e-59, Organism=Homo sapiens, GI83700235, Length=358, Percent_Identity=36.5921787709497, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI224593278, Length=358, Percent_Identity=36.8715083798883, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI51094101, Length=360, Percent_Identity=35.8333333333333, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI164419743, Length=360, Percent_Identity=35.8333333333333, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI13129006, Length=351, Percent_Identity=36.1823361823362, Blast_Score=211, Evalue=9e-55, Organism=Homo sapiens, GI4503529, Length=358, Percent_Identity=34.6368715083799, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI164664518, Length=337, Percent_Identity=35.3115727002967, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI50659095, Length=355, Percent_Identity=36.3380281690141, Blast_Score=204, Evalue=8e-53, Organism=Homo sapiens, GI55749865, Length=351, Percent_Identity=35.6125356125356, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI13514831, Length=361, Percent_Identity=34.9030470914127, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI9506931, Length=390, Percent_Identity=32.5641025641026, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI41327779, Length=380, Percent_Identity=33.6842105263158, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=32.6815642458101, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI38327634, Length=333, Percent_Identity=35.4354354354354, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI4758112, Length=358, Percent_Identity=32.6815642458101, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI18375623, Length=358, Percent_Identity=32.6815642458101, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI38569505, Length=365, Percent_Identity=32.8767123287671, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI38569503, Length=365, Percent_Identity=32.8767123287671, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI6005743, Length=359, Percent_Identity=31.4763231197772, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI8922886, Length=359, Percent_Identity=31.1977715877437, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI256223453, Length=332, Percent_Identity=30.1204819277108, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI62241022, Length=337, Percent_Identity=32.0474777448071, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI164419732, Length=347, Percent_Identity=30.5475504322767, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI9966805, Length=308, Percent_Identity=33.7662337662338, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI62241024, Length=320, Percent_Identity=31.5625, Blast_Score=151, Evalue=9e-37, Organism=Homo sapiens, GI256773275, Length=412, Percent_Identity=29.6116504854369, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI4826686, Length=365, Percent_Identity=27.3972602739726, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI154759257, Length=428, Percent_Identity=26.6355140186916, Blast_Score=125, Evalue=5e-29, Organism=Homo sapiens, GI17505907, Length=214, Percent_Identity=38.3177570093458, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI20336298, Length=214, Percent_Identity=38.3177570093458, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI4557365, Length=365, Percent_Identity=26.5753424657534, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI87082221, Length=352, Percent_Identity=40.625, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI1787016, Length=351, Percent_Identity=40.7407407407407, Blast_Score=251, Evalue=6e-68, Organism=Escherichia coli, GI1787605, Length=359, Percent_Identity=36.4902506963788, Blast_Score=246, Evalue=2e-66, Organism=Escherichia coli, GI1790214, Length=363, Percent_Identity=38.5674931129477, Blast_Score=245, Evalue=4e-66, Organism=Escherichia coli, GI1788930, Length=340, Percent_Identity=38.5294117647059, Blast_Score=215, Evalue=3e-57, Organism=Escherichia coli, GI48994977, Length=346, Percent_Identity=24.8554913294798, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17555296, Length=348, Percent_Identity=40.2298850574713, Blast_Score=261, Evalue=6e-70, Organism=Caenorhabditis elegans, GI17510307, Length=373, Percent_Identity=40.4825737265416, Blast_Score=249, Evalue=1e-66, Organism=Caenorhabditis elegans, GI71995514, Length=373, Percent_Identity=40.4825737265416, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17510309, Length=373, Percent_Identity=40.4825737265416, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI86570094, Length=363, Percent_Identity=37.465564738292, Blast_Score=248, Evalue=4e-66, Organism=Caenorhabditis elegans, GI32565321, Length=383, Percent_Identity=36.0313315926893, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI71995718, Length=375, Percent_Identity=40.5333333333333, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI115533224, Length=355, Percent_Identity=39.4366197183099, Blast_Score=236, Evalue=1e-62, Organism=Caenorhabditis elegans, GI17552642, Length=406, Percent_Identity=36.4532019704434, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71995724, Length=351, Percent_Identity=36.1823361823362, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17507121, Length=352, Percent_Identity=35.7954545454545, Blast_Score=232, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17507945, Length=371, Percent_Identity=36.9272237196765, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI115532546, Length=364, Percent_Identity=36.2637362637363, Blast_Score=224, Evalue=5e-59, Organism=Caenorhabditis elegans, GI115532548, Length=364, Percent_Identity=36.2637362637363, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI71987143, Length=360, Percent_Identity=33.3333333333333, Blast_Score=224, Evalue=7e-59, Organism=Caenorhabditis elegans, GI71999646, Length=391, Percent_Identity=35.2941176470588, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI71999644, Length=359, Percent_Identity=36.4902506963788, Blast_Score=221, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17510559, Length=382, Percent_Identity=35.8638743455497, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=35.6756756756757, Blast_Score=215, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17507881, Length=390, Percent_Identity=35.3846153846154, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=36.2162162162162, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17537549, Length=357, Percent_Identity=37.5350140056022, Blast_Score=208, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17552114, Length=331, Percent_Identity=35.6495468277946, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17509811, Length=353, Percent_Identity=36.2606232294618, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17505370, Length=366, Percent_Identity=34.4262295081967, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI71982858, Length=375, Percent_Identity=32.5333333333333, Blast_Score=187, Evalue=6e-48, Organism=Caenorhabditis elegans, GI17508543, Length=417, Percent_Identity=30.9352517985612, Blast_Score=177, Evalue=8e-45, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=31.0880829015544, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=33.0459770114943, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI71990816, Length=372, Percent_Identity=32.258064516129, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI32564046, Length=370, Percent_Identity=31.6216216216216, Blast_Score=168, Evalue=4e-42, Organism=Caenorhabditis elegans, GI193208216, Length=389, Percent_Identity=32.6478149100257, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17556951, Length=335, Percent_Identity=31.044776119403, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI25148203, Length=400, Percent_Identity=27.5, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17553716, Length=326, Percent_Identity=27.9141104294479, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17536099, Length=379, Percent_Identity=28.4960422163588, Blast_Score=138, Evalue=5e-33, Organism=Caenorhabditis elegans, GI17536101, Length=379, Percent_Identity=28.4960422163588, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17536103, Length=379, Percent_Identity=28.4960422163588, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI25148291, Length=333, Percent_Identity=26.1261261261261, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71997889, Length=360, Percent_Identity=25.5555555555556, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25148205, Length=333, Percent_Identity=25.5255255255255, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71982862, Length=203, Percent_Identity=33.4975369458128, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71987152, Length=96, Percent_Identity=36.4583333333333, Blast_Score=93, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324217, Length=359, Percent_Identity=42.8969359331476, Blast_Score=276, Evalue=6e-75, Organism=Saccharomyces cerevisiae, GI6325138, Length=381, Percent_Identity=40.9448818897638, Blast_Score=268, Evalue=9e-73, Organism=Saccharomyces cerevisiae, GI6321856, Length=400, Percent_Identity=38.75, Blast_Score=261, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6324778, Length=368, Percent_Identity=39.1304347826087, Blast_Score=259, Evalue=4e-70, Organism=Saccharomyces cerevisiae, GI6321360, Length=358, Percent_Identity=38.5474860335196, Blast_Score=232, Evalue=7e-62, Organism=Saccharomyces cerevisiae, GI6320224, Length=359, Percent_Identity=35.933147632312, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=359, Percent_Identity=38.9972144846797, Blast_Score=229, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6320449, Length=379, Percent_Identity=36.9393139841689, Blast_Score=224, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=36.8, Blast_Score=214, Evalue=3e-56, Organism=Saccharomyces cerevisiae, GI6320041, Length=329, Percent_Identity=34.3465045592705, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6322912, Length=347, Percent_Identity=34.8703170028818, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6322323, Length=347, Percent_Identity=34.8703170028818, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6324620, Length=354, Percent_Identity=34.4632768361582, Blast_Score=199, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6322427, Length=356, Percent_Identity=34.8314606741573, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6319714, Length=379, Percent_Identity=30.3430079155673, Blast_Score=196, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=35.4748603351955, Blast_Score=195, Evalue=9e-51, Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=32.6876513317191, Blast_Score=189, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6321267, Length=353, Percent_Identity=37.1104815864023, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6320119, Length=359, Percent_Identity=30.9192200557103, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6320400, Length=389, Percent_Identity=33.1619537275064, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6321111, Length=371, Percent_Identity=32.0754716981132, Blast_Score=173, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=29.0556900726392, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6320173, Length=233, Percent_Identity=36.480686695279, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6324366, Length=362, Percent_Identity=29.0055248618785, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6322876, Length=182, Percent_Identity=39.010989010989, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=418, Percent_Identity=23.444976076555, Blast_Score=96, Evalue=8e-21, Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=41.1931818181818, Blast_Score=270, Evalue=9e-73, Organism=Drosophila melanogaster, GI24584399, Length=362, Percent_Identity=38.6740331491713, Blast_Score=261, Evalue=5e-70, Organism=Drosophila melanogaster, GI24642151, Length=336, Percent_Identity=41.9642857142857, Blast_Score=259, Evalue=3e-69, Organism=Drosophila melanogaster, GI24644487, Length=390, Percent_Identity=37.1794871794872, Blast_Score=258, Evalue=5e-69, Organism=Drosophila melanogaster, GI45551833, Length=390, Percent_Identity=37.1794871794872, Blast_Score=258, Evalue=5e-69, Organism=Drosophila melanogaster, GI24644485, Length=390, Percent_Identity=37.1794871794872, Blast_Score=258, Evalue=5e-69, Organism=Drosophila melanogaster, GI24644483, Length=390, Percent_Identity=37.1794871794872, Blast_Score=258, Evalue=6e-69, Organism=Drosophila melanogaster, GI281361218, Length=390, Percent_Identity=37.1794871794872, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24644481, Length=390, Percent_Identity=37.1794871794872, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24644479, Length=390, Percent_Identity=37.1794871794872, Blast_Score=257, Evalue=8e-69, Organism=Drosophila melanogaster, GI24662330, Length=357, Percent_Identity=40.6162464985994, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24584994, Length=383, Percent_Identity=38.1201044386423, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24585582, Length=347, Percent_Identity=39.4812680115274, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=38.9041095890411, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI17985987, Length=376, Percent_Identity=39.0957446808511, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=36.3128491620112, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI21355075, Length=353, Percent_Identity=41.643059490085, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI21356161, Length=359, Percent_Identity=36.4902506963788, Blast_Score=228, Evalue=7e-60, Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=40.1929260450161, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24645031, Length=355, Percent_Identity=35.7746478873239, Blast_Score=225, Evalue=4e-59, Organism=Drosophila melanogaster, GI28575014, Length=354, Percent_Identity=35.3107344632768, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI17136814, Length=364, Percent_Identity=33.7912087912088, Blast_Score=207, Evalue=8e-54, Organism=Drosophila melanogaster, GI24583281, Length=352, Percent_Identity=34.9431818181818, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24583279, Length=352, Percent_Identity=34.9431818181818, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24582080, Length=358, Percent_Identity=33.5195530726257, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24582078, Length=358, Percent_Identity=33.5195530726257, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI17136248, Length=358, Percent_Identity=33.5195530726257, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24582075, Length=358, Percent_Identity=33.5195530726257, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI21355559, Length=346, Percent_Identity=35.8381502890173, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24642822, Length=376, Percent_Identity=33.7765957446808, Blast_Score=188, Evalue=6e-48, Organism=Drosophila melanogaster, GI28571808, Length=333, Percent_Identity=34.5345345345345, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI28571809, Length=333, Percent_Identity=34.5345345345345, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24666101, Length=359, Percent_Identity=32.8690807799443, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581954, Length=359, Percent_Identity=32.8690807799443, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24581952, Length=359, Percent_Identity=32.8690807799443, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24581956, Length=359, Percent_Identity=32.8690807799443, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI17647335, Length=371, Percent_Identity=30.7277628032345, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI24643725, Length=402, Percent_Identity=30.0995024875622, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI20130173, Length=310, Percent_Identity=30, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI24668515, Length=362, Percent_Identity=29.0055248618785, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI24640164, Length=347, Percent_Identity=28.8184438040346, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI17136666, Length=410, Percent_Identity=29.0243902439024, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI19920478, Length=354, Percent_Identity=27.1186440677966, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI28571338, Length=220, Percent_Identity=35, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI18859659, Length=212, Percent_Identity=35.8490566037736, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24646066, Length=359, Percent_Identity=23.1197771587744, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 45770; Mature: 45639
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFHEMGLPTLLRQALSKNNLCVPTPIQVQAIPLALQGKDILGSAQTGTGKTLAFAIPL CCCCHHCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHCCCCCCCCCCHHHHHHHH VAKLMNEPSIGSALVIVPTRELAHQVTSEIRKLLSQSSLLRVALLIGGEPIFRQLNQLQK HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC KPQIIIGTPGRIIDHIERKTLVTRNVGILVLDETDRMFDMGFGIQIEEIMKHLPKIRQTL CCEEEEECCHHHHHHHHHHHHEECCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHH MFSATLPGEIVKLTEKYLNQPERVSVDCQATTSVKIKQEVVYASESEKYGKLVTQLCQRK HHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHEECCCCHHHHHHHHHHHHCC GSIIIFVKTKRGADQLADKLHKDDYSALAIHGDLRQHKRERVIDSFRRGRNQIMVATDVA CCEEEEEECCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEEEEHH SRGLDIPHIQHVINYDVPQSQADYVHRIGRTARAGAEGFALSFVTPQDKRRLPALADKEG HCCCCCHHHHHHHCCCCCCCHHHHHHHHCHHHCCCCCCEEEEEECCCHHCCCCCCCCCCC EPNFDCSMQSQKRNSKKIFKRPSTLKAKYGRKKINVFKKKSRVLEKAY CCCCCCCCHHHHCCCHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNFHEMGLPTLLRQALSKNNLCVPTPIQVQAIPLALQGKDILGSAQTGTGKTLAFAIPL CCCHHCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHCCCCCCCCCCHHHHHHHH VAKLMNEPSIGSALVIVPTRELAHQVTSEIRKLLSQSSLLRVALLIGGEPIFRQLNQLQK HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC KPQIIIGTPGRIIDHIERKTLVTRNVGILVLDETDRMFDMGFGIQIEEIMKHLPKIRQTL CCEEEEECCHHHHHHHHHHHHEECCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHH MFSATLPGEIVKLTEKYLNQPERVSVDCQATTSVKIKQEVVYASESEKYGKLVTQLCQRK HHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEEEEHHHEECCCCHHHHHHHHHHHHCC GSIIIFVKTKRGADQLADKLHKDDYSALAIHGDLRQHKRERVIDSFRRGRNQIMVATDVA CCEEEEEECCCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEEEEHH SRGLDIPHIQHVINYDVPQSQADYVHRIGRTARAGAEGFALSFVTPQDKRRLPALADKEG HCCCCCHHHHHHHCCCCCCCHHHHHHHHCHHHCCCCCCEEEEEECCCHHCCCCCCCCCCC EPNFDCSMQSQKRNSKKIFKRPSTLKAKYGRKKINVFKKKSRVLEKAY CCCCCCCCHHHHCCCHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA