Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is hflK [H]
Identifier: 190571441
GI number: 190571441
Start: 1124383
End: 1125408
Strand: Reverse
Name: hflK [H]
Synonym: WPa_1054
Alternate gene names: 190571441
Gene position: 1125408-1124383 (Counterclockwise)
Preceding gene: 190571442
Following gene: 190571440
Centisome position: 75.92
GC content: 34.21
Gene sequence:
>1026_bases ATGGATGAGCGTAATCCTTGGAATCTTGGAAAGAAACCGTCAGGTTCAAGTAATGAAGATATTTTAAGTAAAGCTGTGTC TGATATAAGATGCTTTTTTAATGGCTTAACCAGAAATAGAGGGAAAAAACCTTATTTCATCATTTTTATTGTTTTGTTGT TTTATCTTTGTACTGGTTTCTATATTGTCCATCCGAGTGAGGAAGGTATAGAACTTACTTTTGGCAAATATTCCAATACA GAAACATCTGGTTTGCGTTATCACTTTCCCTACCCTATTGGTAAGGTTTTTAAAGTGAATGTTAAAGAAGTAAATCGTGA AGAAATTGGGATAAGCAGCTCTTATGGGCGAGATACAGATCGTGGTGAAGGAGTGATGCTTACCGGAGATGAGAATATAG TCAACGTTAACTTTGAGGTCCAGTGGCGAGTTAGAGATGCCAAAGATTATTTATTCAAAGTGCGGGATTATAAACCTGGT TTCAGCGTTAAAAATGCTGCTGAAAGTGCTATGAGAGAAATAATAGGTAAAAATACGATCTCTTTTGCACTCGAAGGTCA AGGTAGGGCTGAAATCTCCAGAGATACTAGAATTTTATTGCAACAGATTCTTGATGGATATCAAATGGGTATAGAAATTT TATCTGTTCAAATGAAAAAAATTGACCCACCAGAAAAAGTGATTAGCTCATTTAGGGATGTACAAAGTGCTCGTGCAGAT AAGGAGCGTACTATAAACGAAGCATATGCTTACAGTAATGATATTATACCTCGTGCAAAAGGTGAAGCAATAAAGATAAA ATTAGATGCAGAAGCATATGAGAACGAAATAATAAATGAAGCGAAAGGTAATGCAAATCGCTTTTTATCTCTTTATGAAG AATATAGACAAAATCCTTCTCTTGTTAAGAATCGTATTTATCTTGAAACTATGGAAAATATTTTTAGCAAGGTAGATAAA TTTGTTATAACAGACGATCTGAAAGGTATGTTCTCTTATTTACCTCTTACAAATCTAGGAAAATAG
Upstream 100 bases:
>100_bases CATCCTTCACTCCGATCATTAATCTGCAAACAAAATAGTTTTGCATTTTTTGATAAGATTAAGTAATATCATCGTATTAG TTATACAATTAATAATTTTT
Downstream 100 bases:
>100_bases TCATGAGTAGTAATATTAAAATTGTTTTTGCTTTTGTATTTGTTGCATTATTGATTGCATTATCTAATTCAATCTTTGTT GTTCAAGAAACAAAACAAGC
Product: hflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MDERNPWNLGKKPSGSSNEDILSKAVSDIRCFFNGLTRNRGKKPYFIIFIVLLFYLCTGFYIVHPSEEGIELTFGKYSNT ETSGLRYHFPYPIGKVFKVNVKEVNREEIGISSSYGRDTDRGEGVMLTGDENIVNVNFEVQWRVRDAKDYLFKVRDYKPG FSVKNAAESAMREIIGKNTISFALEGQGRAEISRDTRILLQQILDGYQMGIEILSVQMKKIDPPEKVISSFRDVQSARAD KERTINEAYAYSNDIIPRAKGEAIKIKLDAEAYENEIINEAKGNANRFLSLYEEYRQNPSLVKNRIYLETMENIFSKVDK FVITDDLKGMFSYLPLTNLGK
Sequences:
>Translated_341_residues MDERNPWNLGKKPSGSSNEDILSKAVSDIRCFFNGLTRNRGKKPYFIIFIVLLFYLCTGFYIVHPSEEGIELTFGKYSNT ETSGLRYHFPYPIGKVFKVNVKEVNREEIGISSSYGRDTDRGEGVMLTGDENIVNVNFEVQWRVRDAKDYLFKVRDYKPG FSVKNAAESAMREIIGKNTISFALEGQGRAEISRDTRILLQQILDGYQMGIEILSVQMKKIDPPEKVISSFRDVQSARAD KERTINEAYAYSNDIIPRAKGEAIKIKLDAEAYENEIINEAKGNANRFLSLYEEYRQNPSLVKNRIYLETMENIFSKVDK FVITDDLKGMFSYLPLTNLGK >Mature_341_residues MDERNPWNLGKKPSGSSNEDILSKAVSDIRCFFNGLTRNRGKKPYFIIFIVLLFYLCTGFYIVHPSEEGIELTFGKYSNT ETSGLRYHFPYPIGKVFKVNVKEVNREEIGISSSYGRDTDRGEGVMLTGDENIVNVNFEVQWRVRDAKDYLFKVRDYKPG FSVKNAAESAMREIIGKNTISFALEGQGRAEISRDTRILLQQILDGYQMGIEILSVQMKKIDPPEKVISSFRDVQSARAD KERTINEAYAYSNDIIPRAKGEAIKIKLDAEAYENEIINEAKGNANRFLSLYEEYRQNPSLVKNRIYLETMENIFSKVDK FVITDDLKGMFSYLPLTNLGK
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=282, Percent_Identity=37.5886524822695, Blast_Score=173, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 39044; Mature: 39044
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDERNPWNLGKKPSGSSNEDILSKAVSDIRCFFNGLTRNRGKKPYFIIFIVLLFYLCTGF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCE YIVHPSEEGIELTFGKYSNTETSGLRYHFPYPIGKVFKVNVKEVNREEIGISSSYGRDTD EEECCCCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEEHHHCCHHHCCCCCCCCCCCC RGEGVMLTGDENIVNVNFEVQWRVRDAKDYLFKVRDYKPGFSVKNAAESAMREIIGKNTI CCCEEEEECCCCEEEEEEEEEEEEECCHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCE SFALEGQGRAEISRDTRILLQQILDGYQMGIEILSVQMKKIDPPEKVISSFRDVQSARAD EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KERTINEAYAYSNDIIPRAKGEAIKIKLDAEAYENEIINEAKGNANRFLSLYEEYRQNPS HHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHH LVKNRIYLETMENIFSKVDKFVITDDLKGMFSYLPLTNLGK HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDERNPWNLGKKPSGSSNEDILSKAVSDIRCFFNGLTRNRGKKPYFIIFIVLLFYLCTGF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCE YIVHPSEEGIELTFGKYSNTETSGLRYHFPYPIGKVFKVNVKEVNREEIGISSSYGRDTD EEECCCCCCEEEEECCCCCCCCCCEEEECCCCCCCEEEEEHHHCCHHHCCCCCCCCCCCC RGEGVMLTGDENIVNVNFEVQWRVRDAKDYLFKVRDYKPGFSVKNAAESAMREIIGKNTI CCCEEEEECCCCEEEEEEEEEEEEECCHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCE SFALEGQGRAEISRDTRILLQQILDGYQMGIEILSVQMKKIDPPEKVISSFRDVQSARAD EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KERTINEAYAYSNDIIPRAKGEAIKIKLDAEAYENEIINEAKGNANRFLSLYEEYRQNPS HHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHH LVKNRIYLETMENIFSKVDKFVITDDLKGMFSYLPLTNLGK HHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]