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The map label for this gene is yciK [H]

Identifier: 190571309

GI number: 190571309

Start: 983821

End: 984561

Strand: Reverse

Name: yciK [H]

Synonym: WPa_0914

Alternate gene names: 190571309

Gene position: 984561-983821 (Counterclockwise)

Preceding gene: 190571310

Following gene: 190571308

Centisome position: 66.41

GC content: 37.25

Gene sequence:

>741_bases
ATGGGTAAGTTAGAAGGTAAAGTAGCTTTAATTACCGGGGCTTCAGGTGGAATAGGCTCTGCTGTTGCAAAAAGGTTTGT
AAGAGAAGGTGCATGTGTGATTCTGATTTCAAGGTTTATCGATCACCTCAAGCCACTGTATAATGAAATTGAAGAGCTTA
AAGAAGGCTATGTAAAACTAATTCAGCTTGATCTTTTAGACTTTGAAAACGTAGAAAAACTGGCAAATATGATAGAAAGC
CCAAAATTATCAGAATCTGGCACACTTGATATACTGATTACATGCACTGAAATTTTATGTAAGTTGAGCCCTGTTCACGA
TTGTGAGCTTGAAGATCTACAGAAGGTAATGAATACAAATTTTACTGCCAGTTGGTACTTGCTAAAAAATTTGGGTCCGA
TACTAAAAAAGTCTAATGCTGGAAGAGCGATATTCATGACCTCAAAGATAACACTTTCTCCTTCCTCTTATCCATATTGG
ATGCCATATGCTGCAAGTAAAGTTGCACTAGAAGCAATGGTGAAGATATATGCATCTGAGACAAAACATACGAATTTGTG
CATAAATGCCGTGTATTCGGAAGAGCCTATCGATAGTGAAATGTATAAGCAAGCATTTCCGGGAAAAGATATATCTGAAT
TGGTGCCACCTGATAAACTGACAGACAAATTTGTAGAACTTGCTTCTGAAGATTGTAGCATATCAGGACAAATCTTACCA
CTTAGCAAATCTCCCGAGTAA

Upstream 100 bases:

>100_bases
TCGTTACTATTTTTTTATGTGCTAAGTTTGATTTTTATATATGGAGCAAAATTTAATTTTCAGCTAAAATATTTCAATGG
ATCTTGCTAAGGAGAAAGAA

Downstream 100 bases:

>100_bases
ATTACCATAGTATCTGCAAAGATACTGTTAAGCCTAAAGGTAGTTAGGTTTAATAAAAATTCACATACACAGGAAAGATT
GGTAACATTATTTGAGTCGA

Product: oxidoreductase, short-chain dehydrogenase/reductase family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MGKLEGKVALITGASGGIGSAVAKRFVREGACVILISRFIDHLKPLYNEIEELKEGYVKLIQLDLLDFENVEKLANMIES
PKLSESGTLDILITCTEILCKLSPVHDCELEDLQKVMNTNFTASWYLLKNLGPILKKSNAGRAIFMTSKITLSPSSYPYW
MPYAASKVALEAMVKIYASETKHTNLCINAVYSEEPIDSEMYKQAFPGKDISELVPPDKLTDKFVELASEDCSISGQILP
LSKSPE

Sequences:

>Translated_246_residues
MGKLEGKVALITGASGGIGSAVAKRFVREGACVILISRFIDHLKPLYNEIEELKEGYVKLIQLDLLDFENVEKLANMIES
PKLSESGTLDILITCTEILCKLSPVHDCELEDLQKVMNTNFTASWYLLKNLGPILKKSNAGRAIFMTSKITLSPSSYPYW
MPYAASKVALEAMVKIYASETKHTNLCINAVYSEEPIDSEMYKQAFPGKDISELVPPDKLTDKFVELASEDCSISGQILP
LSKSPE
>Mature_245_residues
GKLEGKVALITGASGGIGSAVAKRFVREGACVILISRFIDHLKPLYNEIEELKEGYVKLIQLDLLDFENVEKLANMIESP
KLSESGTLDILITCTEILCKLSPVHDCELEDLQKVMNTNFTASWYLLKNLGPILKKSNAGRAIFMTSKITLSPSSYPYWM
PYAASKVALEAMVKIYASETKHTNLCINAVYSEEPIDSEMYKQAFPGKDISELVPPDKLTDKFVELASEDCSISGQILPL
SKSPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Escherichia coli, GI1787526, Length=232, Percent_Identity=30.6034482758621, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87082100, Length=213, Percent_Identity=30.5164319248826, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87082160, Length=190, Percent_Identity=27.3684210526316, Blast_Score=62, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=27.7777777777778, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI23397609, Length=188, Percent_Identity=30.8510638297872, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357673, Length=202, Percent_Identity=24.2574257425743, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21358495, Length=236, Percent_Identity=27.1186440677966, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27203; Mature: 27072

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLEGKVALITGASGGIGSAVAKRFVREGACVILISRFIDHLKPLYNEIEELKEGYVKL
CCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQLDLLDFENVEKLANMIESPKLSESGTLDILITCTEILCKLSPVHDCELEDLQKVMNTN
HHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHCCC
FTASWYLLKNLGPILKKSNAGRAIFMTSKITLSPSSYPYWMPYAASKVALEAMVKIYASE
CCHHHHHHHHCCHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
TKHTNLCINAVYSEEPIDSEMYKQAFPGKDISELVPPDKLTDKFVELASEDCSISGQILP
CCCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCEEEE
LSKSPE
CCCCCC
>Mature Secondary Structure 
GKLEGKVALITGASGGIGSAVAKRFVREGACVILISRFIDHLKPLYNEIEELKEGYVKL
CCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQLDLLDFENVEKLANMIESPKLSESGTLDILITCTEILCKLSPVHDCELEDLQKVMNTN
HHHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCHHHHHHHHCCC
FTASWYLLKNLGPILKKSNAGRAIFMTSKITLSPSSYPYWMPYAASKVALEAMVKIYASE
CCHHHHHHHHCCHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
TKHTNLCINAVYSEEPIDSEMYKQAFPGKDISELVPPDKLTDKFVELASEDCSISGQILP
CCCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCEEEE
LSKSPE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1885549 [H]