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The map label for this gene is yfkH [H]

Identifier: 190571310

GI number: 190571310

Start: 984572

End: 985387

Strand: Reverse

Name: yfkH [H]

Synonym: WPa_0915

Alternate gene names: 190571310

Gene position: 985387-984572 (Counterclockwise)

Preceding gene: 190571313

Following gene: 190571309

Centisome position: 66.47

GC content: 33.33

Gene sequence:

>816_bases
GTGCTACAGAAATTTTATAGTATCGTTTATTGCCTTTATCGTGCTTTAATTGACACAATTTATAATGATGGAGTGGAGCA
TGCAGGGTATCTATCATTTTTAATCCTGTTATCAATATTTCCTTTTCTTATTGTTTTAATAGCCATGGCATCAACGTTCG
CAAATTTCTTAGATCAATACAATGTCGGCTGGGCATTTATTATTGATAACATGCCACAGGATATTTTATCATCTTTGATG
CCACGTATTAGGGAGATAATATCAGGCCCTCCGCAAAGCTTATTAACCTTGGCAATTGTAGGCGCTGTTTGGACTGCCTC
ATCGACAATTGAAGGATTTAGAACGATATTGAATAAGGCCTATAAAGTTCCGGTTTCATCGCCTTATATATGGAGAAGGG
TGCTCAGTATATTACAATTTTTAGTAATTACGCTTGTTACAACTCTGACTATAGTATTTTTTACATTAGTGCCAATGTTA
ATTGATTTTTCTTACCAAGGGCTAAGTTATACTAGATATTTACTTATTGAGTTTGTGCTTTTTACTATAGTATCTTGGCT
ATATTTTACATTGCCAAACATAAAGCAAAACTTATCAGACGTATTTCCCGGATCTTGTGTGGCTGTTATTCTTTGGACGA
TCTCTGCTTCAGCTTTCAAGCAATATTTAAAAGCTTCCTTTGATCAACTGAATTTGATATATGGAAGTTTAGGTGGTGTG
GTAGTATCGTTACTATTTTTTTATGTGCTAAGTTTGATTTTTATATATGGAGCAAAATTTAATTTTCAGCTAAAATATTT
CAATGGATCTTGCTAA

Upstream 100 bases:

>100_bases
CTATCATTTTGATTAAATTTAAGTAAACGGTGAGGATTTTTTACTTAAAAGTATGCTTTATTTCATTTAGAATACTTTTC
TTAGTTTATTTATATTACAA

Downstream 100 bases:

>100_bases
GGAGAAAGAAATGGGTAAGTTAGAAGGTAAAGTAGCTTTAATTACCGGGGCTTCAGGTGGAATAGGCTCTGCTGTTGCAA
AAAGGTTTGTAAGAGAAGGT

Product: ribonuclease, BN family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MLQKFYSIVYCLYRALIDTIYNDGVEHAGYLSFLILLSIFPFLIVLIAMASTFANFLDQYNVGWAFIIDNMPQDILSSLM
PRIREIISGPPQSLLTLAIVGAVWTASSTIEGFRTILNKAYKVPVSSPYIWRRVLSILQFLVITLVTTLTIVFFTLVPML
IDFSYQGLSYTRYLLIEFVLFTIVSWLYFTLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFDQLNLIYGSLGGV
VVSLLFFYVLSLIFIYGAKFNFQLKYFNGSC

Sequences:

>Translated_271_residues
MLQKFYSIVYCLYRALIDTIYNDGVEHAGYLSFLILLSIFPFLIVLIAMASTFANFLDQYNVGWAFIIDNMPQDILSSLM
PRIREIISGPPQSLLTLAIVGAVWTASSTIEGFRTILNKAYKVPVSSPYIWRRVLSILQFLVITLVTTLTIVFFTLVPML
IDFSYQGLSYTRYLLIEFVLFTIVSWLYFTLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFDQLNLIYGSLGGV
VVSLLFFYVLSLIFIYGAKFNFQLKYFNGSC
>Mature_271_residues
MLQKFYSIVYCLYRALIDTIYNDGVEHAGYLSFLILLSIFPFLIVLIAMASTFANFLDQYNVGWAFIIDNMPQDILSSLM
PRIREIISGPPQSLLTLAIVGAVWTASSTIEGFRTILNKAYKVPVSSPYIWRRVLSILQFLVITLVTTLTIVFFTLVPML
IDFSYQGLSYTRYLLIEFVLFTIVSWLYFTLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFDQLNLIYGSLGGV
VVSLLFFYVLSLIFIYGAKFNFQLKYFNGSC

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 30798; Mature: 30798

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]