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The map label for this gene is ydaM [H]

Identifier: 190571027

GI number: 190571027

Start: 672406

End: 673995

Strand: Reverse

Name: ydaM [H]

Synonym: WPa_0619

Alternate gene names: 190571027

Gene position: 673995-672406 (Counterclockwise)

Preceding gene: 190571028

Following gene: 190571026

Centisome position: 45.46

GC content: 31.13

Gene sequence:

>1590_bases
ATGCCTGTACTTCAAACTGATAATGTAGAAAAAATTAAATTTGATTCTAGTTTATGCAAAGAACAAGAGAAACTTTTCTA
CTATAGGTTTAATATAATTCCTTGGCAAAAATTAAATGATACTACTTTTTTTATGGTTGAAGACATAAGCCAAGATATCA
ACCTTTGGGTCGAATCTCATTACGGTATTGAATATGTATTGATAAAAGTAGATAGCAAACAGATTTTAAATCTTCTTAAC
TCACACTTTGGTATTTCAGAATTCGCAAGTAACTACTTATATTATAAGAATCCTAATTTTTCAGCTAAAAGCATTAGGCT
GAGTTCAATCTTTTTTTCCTCTTTCTTTGTTATGATTTCGACTTTAACACTGACAAAAAAATATGCATATTTTGCTTTGA
TGTTGATATTTATAATCGGATGTTCTAGTTCTTTATTCAAATTTGTAACTAAAATTTTTGGCTTGCGTAAAATTTCTAAC
CAAAAAGCAGATTATGATAAGATGAATGAACCTATATATACTATTTTATTGCCTGCTTTTAAAGAGAATGCGGTTATAAA
GCAATTGATTAAGAGCATTGAAAGTTTGGATTATCCAAAATCAAAATTAGATGTAAAGCTTGTGATAGAGAGCGATGATC
AAGAAATGTTGGCAGCTATAGAAAAATGCACTTTACCACAGTATTTTGAAGTAATAAAAGTGCCTCATTCTCTGCCTAGA
ACAAAAGCTAAGTCATGCAATTATGCTATGAGCTTTGCTAGAGGAAAGTATGTGGTAATATATGATGCAGATGACAAGCC
AGATCCGTTGCAGTTAAAAAAAGCACTAATTGAATTTAATAAGGGCGACGAAAAGTTGGCTTGTGTACAGGCGAAATTAA
ATTACTATAACTTTGGTTGCAATTTTCTTACAAAATTCTTTTCTCTTGAGTATATGAACTGGTTTCAATATTTTTTGCCT
GGATTTCAAAAAATGAACATGCCAATACCTTTGGGTGGTAGCAGTAACCATTTTTCAGTGGAAATTTTAAAGAAAGTGCT
TTTTTGGGATGCTTACAATGTCACTGAAGACGCTGACCTTGGTTTGAGACTTGCGCAAATGGGATATAAAACCAGGATTA
TTGATTCAGAAACATTGGAAGAATCACCAACTACTGTGTTTGCTTGGATCAAACAAAGAGCACGCTGGATTAAAGGTTAT
ATGCAAACTTATATCGTTCATTTAAAAAATATAAAATTACTTTTTAAGCACACTGGGCTTAAGGGAGTTTTGCTATTAAA
CCTTTTTGTTGGTTCCTCAGCTTTTATATTTTTCACGACTCCTTTTTTGTTACTTTCATTGGTGCTGACTCAAATTTTGA
ATGAATTATTCTTATATTATTTTATAATAGTATACGGTATTAACTTGATTTTTTTGATAATAGCTATCAGACAACAAAAA
ATGCCTTTTTATTTTTATATAGTATCAATATTTTTTCCCGTCTATAGTCTACTACATAGCGTTGCAGCTTTTCTCGCTTT
GTGGGAATTTGTTATTCACCCTCAGCAATGGAATAAAACTCAGCATGGATTATGGAAGCAAAACCTGTAG

Upstream 100 bases:

>100_bases
CTGTAAAAAAAATAATGCATGAACGTAAAGATGATAAGCGTAGTAGTGAGGTTATATCTTCGTTTTCACGTGACTTGAGC
AAAAAGTTGCATTAAGTTTA

Downstream 100 bases:

>100_bases
CTATTTGGCTTTTTCTCTGCTCTCTCATGGTGATTTGCATGGTGGGAATTGGTGGATTTACCAGACTTTCAAAAGCAGGA
TTGTCAATCACGGAATGGAA

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MPVLQTDNVEKIKFDSSLCKEQEKLFYYRFNIIPWQKLNDTTFFMVEDISQDINLWVESHYGIEYVLIKVDSKQILNLLN
SHFGISEFASNYLYYKNPNFSAKSIRLSSIFFSSFFVMISTLTLTKKYAYFALMLIFIIGCSSSLFKFVTKIFGLRKISN
QKADYDKMNEPIYTILLPAFKENAVIKQLIKSIESLDYPKSKLDVKLVIESDDQEMLAAIEKCTLPQYFEVIKVPHSLPR
TKAKSCNYAMSFARGKYVVIYDADDKPDPLQLKKALIEFNKGDEKLACVQAKLNYYNFGCNFLTKFFSLEYMNWFQYFLP
GFQKMNMPIPLGGSSNHFSVEILKKVLFWDAYNVTEDADLGLRLAQMGYKTRIIDSETLEESPTTVFAWIKQRARWIKGY
MQTYIVHLKNIKLLFKHTGLKGVLLLNLFVGSSAFIFFTTPFLLLSLVLTQILNELFLYYFIIVYGINLIFLIIAIRQQK
MPFYFYIVSIFFPVYSLLHSVAAFLALWEFVIHPQQWNKTQHGLWKQNL

Sequences:

>Translated_529_residues
MPVLQTDNVEKIKFDSSLCKEQEKLFYYRFNIIPWQKLNDTTFFMVEDISQDINLWVESHYGIEYVLIKVDSKQILNLLN
SHFGISEFASNYLYYKNPNFSAKSIRLSSIFFSSFFVMISTLTLTKKYAYFALMLIFIIGCSSSLFKFVTKIFGLRKISN
QKADYDKMNEPIYTILLPAFKENAVIKQLIKSIESLDYPKSKLDVKLVIESDDQEMLAAIEKCTLPQYFEVIKVPHSLPR
TKAKSCNYAMSFARGKYVVIYDADDKPDPLQLKKALIEFNKGDEKLACVQAKLNYYNFGCNFLTKFFSLEYMNWFQYFLP
GFQKMNMPIPLGGSSNHFSVEILKKVLFWDAYNVTEDADLGLRLAQMGYKTRIIDSETLEESPTTVFAWIKQRARWIKGY
MQTYIVHLKNIKLLFKHTGLKGVLLLNLFVGSSAFIFFTTPFLLLSLVLTQILNELFLYYFIIVYGINLIFLIIAIRQQK
MPFYFYIVSIFFPVYSLLHSVAAFLALWEFVIHPQQWNKTQHGLWKQNL
>Mature_528_residues
PVLQTDNVEKIKFDSSLCKEQEKLFYYRFNIIPWQKLNDTTFFMVEDISQDINLWVESHYGIEYVLIKVDSKQILNLLNS
HFGISEFASNYLYYKNPNFSAKSIRLSSIFFSSFFVMISTLTLTKKYAYFALMLIFIIGCSSSLFKFVTKIFGLRKISNQ
KADYDKMNEPIYTILLPAFKENAVIKQLIKSIESLDYPKSKLDVKLVIESDDQEMLAAIEKCTLPQYFEVIKVPHSLPRT
KAKSCNYAMSFARGKYVVIYDADDKPDPLQLKKALIEFNKGDEKLACVQAKLNYYNFGCNFLTKFFSLEYMNWFQYFLPG
FQKMNMPIPLGGSSNHFSVEILKKVLFWDAYNVTEDADLGLRLAQMGYKTRIIDSETLEESPTTVFAWIKQRARWIKGYM
QTYIVHLKNIKLLFKHTGLKGVLLLNLFVGSSAFIFFTTPFLLLSLVLTQILNELFLYYFIIVYGINLIFLIIAIRQQKM
PFYFYIVSIFFPVYSLLHSVAAFLALWEFVIHPQQWNKTQHGLWKQNL

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 61850; Mature: 61719

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLQTDNVEKIKFDSSLCKEQEKLFYYRFNIIPWQKLNDTTFFMVEDISQDINLWVESH
CCCCCCCCCCEEECCHHHHHHHHHEEEEEEEEEECCCCCCCEEEEEHHHCHHHHEEEEEC
YGIEYVLIKVDSKQILNLLNSHFGISEFASNYLYYKNPNFSAKSIRLSSIFFSSFFVMIS
CCEEEEEEEECHHHHHHHHHHCCCHHHHHCCCEEEECCCCCHHHEEHHHHHHHHHHHHHH
TLTLTKKYAYFALMLIFIIGCSSSLFKFVTKIFGLRKISNQKADYDKMNEPIYTILLPAF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEHHH
KENAVIKQLIKSIESLDYPKSKLDVKLVIESDDQEMLAAIEKCTLPQYFEVIKVPHSLPR
CCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCCC
TKAKSCNYAMSFARGKYVVIYDADDKPDPLQLKKALIEFNKGDEKLACVQAKLNYYNFGC
CHHCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEHHEEHHHHEECCH
NFLTKFFSLEYMNWFQYFLPGFQKMNMPIPLGGSSNHFSVEILKKVLFWDAYNVTEDADL
HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
GLRLAQMGYKTRIIDSETLEESPTTVFAWIKQRARWIKGYMQTYIVHLKNIKLLFKHTGL
CHHHHHCCCCEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
KGVLLLNLFVGSSAFIFFTTPFLLLSLVLTQILNELFLYYFIIVYGINLIFLIIAIRQQK
CHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPFYFYIVSIFFPVYSLLHSVAAFLALWEFVIHPQQWNKTQHGLWKQNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PVLQTDNVEKIKFDSSLCKEQEKLFYYRFNIIPWQKLNDTTFFMVEDISQDINLWVESH
CCCCCCCCCEEECCHHHHHHHHHEEEEEEEEEECCCCCCCEEEEEHHHCHHHHEEEEEC
YGIEYVLIKVDSKQILNLLNSHFGISEFASNYLYYKNPNFSAKSIRLSSIFFSSFFVMIS
CCEEEEEEEECHHHHHHHHHHCCCHHHHHCCCEEEECCCCCHHHEEHHHHHHHHHHHHHH
TLTLTKKYAYFALMLIFIIGCSSSLFKFVTKIFGLRKISNQKADYDKMNEPIYTILLPAF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEHHH
KENAVIKQLIKSIESLDYPKSKLDVKLVIESDDQEMLAAIEKCTLPQYFEVIKVPHSLPR
CCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHCCCCCCC
TKAKSCNYAMSFARGKYVVIYDADDKPDPLQLKKALIEFNKGDEKLACVQAKLNYYNFGC
CHHCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEHHEEHHHHEECCH
NFLTKFFSLEYMNWFQYFLPGFQKMNMPIPLGGSSNHFSVEILKKVLFWDAYNVTEDADL
HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
GLRLAQMGYKTRIIDSETLEESPTTVFAWIKQRARWIKGYMQTYIVHLKNIKLLFKHTGL
CHHHHHCCCCEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
KGVLLLNLFVGSSAFIFFTTPFLLLSLVLTQILNELFLYYFIIVYGINLIFLIIAIRQQK
CHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPFYFYIVSIFFPVYSLLHSVAAFLALWEFVIHPQQWNKTQHGLWKQNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]