Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190570966
Identifier: 190570966
GI number: 190570966
Start: 591783
End: 593204
Strand: Direct
Name: 190570966
Synonym: WPa_0552
Alternate gene names: NA
Gene position: 591783-593204 (Clockwise)
Preceding gene: 190570959
Following gene: 190570967
Centisome position: 39.92
GC content: 32.49
Gene sequence:
>1422_bases ATGTTAGCCATCATAGAAAGATACAATAAATCTAAAGAGAGTACTCACTTCACTAAACTTAAGGCTGGCGGAAGATTTGC CATTTATGCGCTTGGTATATACTTAGCAGCTACAGTTACTATTGGCTGTTTGGGGTTAATAATAGGATCTACTTTCTTAA CTTTACCACTTGCTATGCTAATTTTTCATCCTGTAGCTTGGATCTTAATGGGAATAGTGCTTACAGCAACATACAAGATG GTTATTGAACCTTTATTTTACTTGGTAAAAGATTATGTTGATGGAAAAGGAATTATAAAGGAAGAAAAGAGTGAAGAAAA AGGAGTTGAGTTACGAGAACAGAATCCAAAAGAGCCAAAGTTAACAAGTATGGATAGTCTGGTAATGTTGGATAATACTG TTAAAAATGGAGAATTAATAAAAAGTCAATCATTGGACAGTGGACTAGATGTTATATCAAGAAAAACAGATGATTCGGAT AAGAGGGTACGTAGAAATTCCTATTCTCCATCTACAGATAGTGGTGTGAGTATGGGCTCAATAGAAAGTGAGCAACCTAA ACAAACAAAAATTGTTCGATATAATACTACAGGTGATGGAAACTGCTTTTTTCATGCAGTGTTTGGTGATAGCAGCTCCG GTCAATATAAGGCTGAAAGAGCACAAGATATGAGAATGGAATGGAACAAATTTTTAAGTCAATTTAAATCTTTAGGTGAT TCAAGTATGCCAACTCCTTTAAAGGAGCAGCTAGAAAAGGTTTTTAATATGTTTTTAAATAAGCCAGGCGATTTAACTGG TAAGTCTGATAAAATAAGGAAGTTGGTTGAACAAATGAATAAGGAAATTAAAAATGCTGAAGATAATGTAGAAAAGTTAG TGAGTAAAGCTGTTAGTAAACTTAATATATCACGCGATCAAGCTATACATAATTTAAAAGAATATGCAGAAGCTCTTTAT GGCCTTGGTGAAAATGAATACAATACCCAGTATAATAGTGAATTTATTACACAATCATTCCTTAACAAACCTGAACTCTA TCAAGCTTATCTTGAAGCAATAAAAAGTCAAAGTTATTTTATTTTTATTGAAGAAATTAGTATATTAGCTTCTTTAGCTA ATATTGAAATTAATGTTTACTATAAAGATAACAACAGCGAGGAGCAAAAAAAGTTTGAGCCAAATCTACAAATGATAAAT GATGATCAACTAAATCAGATATTTAATCGTGAGAGTTATAAATTAAATGACGAGTTGTGGGGTGATAAAAAACAAGAAAC GATATACTTAACGCCTGGTCATTATGAGAGGTGCGAGGTGGTAGAGGTAGAGCCTTCTCTTATAGAGAAAGTAAATTCAT TTGTGCAAGATGTTATAATAGCAGCTTGTAATAGTGTTAAAAATGCATTTTCTAGCGACTAG
Upstream 100 bases:
>100_bases TCTACTTCAAAAGCTTTGAATGCTCAATATTTTTACATATAAATGCTAATATTGATTTTACCTTCATAATTTGCTAGAAT TGATAAACGTGAAATATAAT
Downstream 100 bases:
>100_bases AAAGCCTATGTCCCTACAAATAGGAAGTTTGACGATTGATTCTCCAGTTATTTTAGCGCCAATGTCTGGAGTGACTGACT ATCCATTTAGGAGTATTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MLAIIERYNKSKESTHFTKLKAGGRFAIYALGIYLAATVTIGCLGLIIGSTFLTLPLAMLIFHPVAWILMGIVLTATYKM VIEPLFYLVKDYVDGKGIIKEEKSEEKGVELREQNPKEPKLTSMDSLVMLDNTVKNGELIKSQSLDSGLDVISRKTDDSD KRVRRNSYSPSTDSGVSMGSIESEQPKQTKIVRYNTTGDGNCFFHAVFGDSSSGQYKAERAQDMRMEWNKFLSQFKSLGD SSMPTPLKEQLEKVFNMFLNKPGDLTGKSDKIRKLVEQMNKEIKNAEDNVEKLVSKAVSKLNISRDQAIHNLKEYAEALY GLGENEYNTQYNSEFITQSFLNKPELYQAYLEAIKSQSYFIFIEEISILASLANIEINVYYKDNNSEEQKKFEPNLQMIN DDQLNQIFNRESYKLNDELWGDKKQETIYLTPGHYERCEVVEVEPSLIEKVNSFVQDVIIAACNSVKNAFSSD
Sequences:
>Translated_473_residues MLAIIERYNKSKESTHFTKLKAGGRFAIYALGIYLAATVTIGCLGLIIGSTFLTLPLAMLIFHPVAWILMGIVLTATYKM VIEPLFYLVKDYVDGKGIIKEEKSEEKGVELREQNPKEPKLTSMDSLVMLDNTVKNGELIKSQSLDSGLDVISRKTDDSD KRVRRNSYSPSTDSGVSMGSIESEQPKQTKIVRYNTTGDGNCFFHAVFGDSSSGQYKAERAQDMRMEWNKFLSQFKSLGD SSMPTPLKEQLEKVFNMFLNKPGDLTGKSDKIRKLVEQMNKEIKNAEDNVEKLVSKAVSKLNISRDQAIHNLKEYAEALY GLGENEYNTQYNSEFITQSFLNKPELYQAYLEAIKSQSYFIFIEEISILASLANIEINVYYKDNNSEEQKKFEPNLQMIN DDQLNQIFNRESYKLNDELWGDKKQETIYLTPGHYERCEVVEVEPSLIEKVNSFVQDVIIAACNSVKNAFSSD >Mature_473_residues MLAIIERYNKSKESTHFTKLKAGGRFAIYALGIYLAATVTIGCLGLIIGSTFLTLPLAMLIFHPVAWILMGIVLTATYKM VIEPLFYLVKDYVDGKGIIKEEKSEEKGVELREQNPKEPKLTSMDSLVMLDNTVKNGELIKSQSLDSGLDVISRKTDDSD KRVRRNSYSPSTDSGVSMGSIESEQPKQTKIVRYNTTGDGNCFFHAVFGDSSSGQYKAERAQDMRMEWNKFLSQFKSLGD SSMPTPLKEQLEKVFNMFLNKPGDLTGKSDKIRKLVEQMNKEIKNAEDNVEKLVSKAVSKLNISRDQAIHNLKEYAEALY GLGENEYNTQYNSEFITQSFLNKPELYQAYLEAIKSQSYFIFIEEISILASLANIEINVYYKDNNSEEQKKFEPNLQMIN DDQLNQIFNRESYKLNDELWGDKKQETIYLTPGHYERCEVVEVEPSLIEKVNSFVQDVIIAACNSVKNAFSSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53738; Mature: 53738
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIIERYNKSKESTHFTKLKAGGRFAIYALGIYLAATVTIGCLGLIIGSTFLTLPLAML CCHHHHHHCCCCCCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFHPVAWILMGIVLTATYKMVIEPLFYLVKDYVDGKGIIKEEKSEEKGVELREQNPKEPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHCCCCCCCC LTSMDSLVMLDNTVKNGELIKSQSLDSGLDVISRKTDDSDKRVRRNSYSPSTDSGVSMGS CCCCCCEEEECCCCCCCCHHHHCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCC IESEQPKQTKIVRYNTTGDGNCFFHAVFGDSSSGQYKAERAQDMRMEWNKFLSQFKSLGD CCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC SSMPTPLKEQLEKVFNMFLNKPGDLTGKSDKIRKLVEQMNKEIKNAEDNVEKLVSKAVSK CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LNISRDQAIHNLKEYAEALYGLGENEYNTQYNSEFITQSFLNKPELYQAYLEAIKSQSYF HCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEE IFIEEISILASLANIEINVYYKDNNSEEQKKFEPNLQMINDDQLNQIFNRESYKLNDELW EEHHHHHHHHHHHCEEEEEEECCCCCHHHHHCCCCCEEECHHHHHHHHCCCCCEECHHHC GDKKQETIYLTPGHYERCEVVEVEPSLIEKVNSFVQDVIIAACNSVKNAFSSD CCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLAIIERYNKSKESTHFTKLKAGGRFAIYALGIYLAATVTIGCLGLIIGSTFLTLPLAML CCHHHHHHCCCCCCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFHPVAWILMGIVLTATYKMVIEPLFYLVKDYVDGKGIIKEEKSEEKGVELREQNPKEPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHCCCCCCCC LTSMDSLVMLDNTVKNGELIKSQSLDSGLDVISRKTDDSDKRVRRNSYSPSTDSGVSMGS CCCCCCEEEECCCCCCCCHHHHCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCC IESEQPKQTKIVRYNTTGDGNCFFHAVFGDSSSGQYKAERAQDMRMEWNKFLSQFKSLGD CCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC SSMPTPLKEQLEKVFNMFLNKPGDLTGKSDKIRKLVEQMNKEIKNAEDNVEKLVSKAVSK CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LNISRDQAIHNLKEYAEALYGLGENEYNTQYNSEFITQSFLNKPELYQAYLEAIKSQSYF HCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEE IFIEEISILASLANIEINVYYKDNNSEEQKKFEPNLQMINDDQLNQIFNRESYKLNDELW EEHHHHHHHHHHHCEEEEEEECCCCCHHHHHCCCCCEEECHHHHHHHHCCCCCEECHHHC GDKKQETIYLTPGHYERCEVVEVEPSLIEKVNSFVQDVIIAACNSVKNAFSSD CCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA