Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570914
Identifier: 190570914
GI number: 190570914
Start: 531027
End: 532403
Strand: Direct
Name: 190570914
Synonym: WPa_0494
Alternate gene names: NA
Gene position: 531027-532403 (Clockwise)
Preceding gene: 190570912
Following gene: 190570915
Centisome position: 35.82
GC content: 34.2
Gene sequence:
>1377_bases ATGACAAAAGAATCATTAGCAAAAACTGATATAGTGAAAGTTGAAGATCAGAAAGCACCAAAGAGCTTTTTTAAGATACT AGGTGAAGTAGCAAACGCTGTAAGATCATGGGTTGGCAATATTAACCCTGATTTAAGTAGTAGTCGCGATGTCGATAGTT TAGTCTTGAAGATGAACGAATGCTTAAACCCAAAGGGGGGTGAAGTCTCAGCACGTAAGAACACCGTATCTCTTGGTAAT TTGTACTTGAGTTTATCAGAGGCAGGTCAAATAAAATTTTTACAAACCCTGGCAGAAAAGTTCAATCCGGATAAAACGAA AATAGATGAAGAAATAAAAGTATATAAGAAAAATCAAGATTCTGAGTCGAGCTATAAGTTTGAACAAGACTTAATAAAAG TCCTTGAATCACCACGCTCTAAAATATTGAAGCAGTTTATCTCCTTACCAGAAGGTCTTAAGTTTATTGTTGATATGCGT TCTGATGTGCTTAAGCTAAAGAACCAATATGAAAATCTAAACCCACTAGAAAATGAATTAAAAAATATACTCTGTACTTT GGTTGATGTTGATCTACTTGATCTTCATCAAATCACCTGGGATTCACCTGCATCATTGTTGGAAAAACTTATAAAATATG AAGCTGTACATAAAATTTCCTCTTGGGGTGACTTAAAAAACAGACTAGATTCTGATCGTCTCTGTTTTGCTTTCTTTCAT TACAAAATACCAAACGAACCTCTAATTTTTGTAGAGGTTGCATTGATGAATGAGATTTCAGATAGTATTCAACACCTTTT GGATGAGTCAGTGCCCTCAAGTGACCCAAGCAGTGCAAGTACTGCTATATTCTATTCAATATCAAACACTCAAACTGGTT TATCTGGAATTAGCCTCGGTAACTTTTTAATAAAGAGAGTCGTAGAAAAACTATCGCAAGAATTTAAAAGCGTAAAAGTG TATGCAACTCTTTCTCCAGTTCCTGGATTTACAAAATGGCTAAAAAATCAAGACGTAGCTTTATTAGGTAAGCTTAATAT AAAACAATCAGGTACAGAAATTTTAGAAAGCATAAAAACTAACATTGAATGCGAAAAACAGCCCCTACTGAAACTTTGTG CACATTATTTGCTAAAGGTTAAAAGCAGTGGTGGAGGTGCTTATGATCCAGTAGCACACTTTCATTTAAGCAATGGTGCA TCAATCAAACAAATCAACTGGATGGCTGATACTTCTGAAAAAGGCATTAGTCAGTCAGCCGGAATAATGGTGAATTATCT GTATGAGCTGCCTAAAATAGATAACAATCATGAAAATTATATGATTAATAAAGTGATTTCTCATTCAAAAAAAGTGTCAG CTATGTTAAAGGAATAA
Upstream 100 bases:
>100_bases TTTAAATAGATTATAAAATAGTTGTACCATGAAAGTATATGCCTTCTTTGTAGACTAAGATTTTTCTTTAAATTAAGATA GATACACGATAAAAGGAAAT
Downstream 100 bases:
>100_bases TAGGAAGTGCGCAAGCATATAGAAAGTGCTAACATTCCCTAATGTTTATGTATATAATATTGAATAGTTTTATGAGGTAA AATGTATGAATAGTGATGAA
Product: malonyl-CoA decarboxylase, putative
Products: NA
Alternate protein names: Malonyl-CoA Decarboxylase Superfamily; Malonyl-CoA Decarboxylase Superfamily Protein; Malonyl-CoA Decarboxylase Protein; MCD Malonyl-CoA Decarboxylase MCD; Malonyl-CoA Decarboxylase Family Protein; Decarboxylase
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MTKESLAKTDIVKVEDQKAPKSFFKILGEVANAVRSWVGNINPDLSSSRDVDSLVLKMNECLNPKGGEVSARKNTVSLGN LYLSLSEAGQIKFLQTLAEKFNPDKTKIDEEIKVYKKNQDSESSYKFEQDLIKVLESPRSKILKQFISLPEGLKFIVDMR SDVLKLKNQYENLNPLENELKNILCTLVDVDLLDLHQITWDSPASLLEKLIKYEAVHKISSWGDLKNRLDSDRLCFAFFH YKIPNEPLIFVEVALMNEISDSIQHLLDESVPSSDPSSASTAIFYSISNTQTGLSGISLGNFLIKRVVEKLSQEFKSVKV YATLSPVPGFTKWLKNQDVALLGKLNIKQSGTEILESIKTNIECEKQPLLKLCAHYLLKVKSSGGGAYDPVAHFHLSNGA SIKQINWMADTSEKGISQSAGIMVNYLYELPKIDNNHENYMINKVISHSKKVSAMLKE
Sequences:
>Translated_458_residues MTKESLAKTDIVKVEDQKAPKSFFKILGEVANAVRSWVGNINPDLSSSRDVDSLVLKMNECLNPKGGEVSARKNTVSLGN LYLSLSEAGQIKFLQTLAEKFNPDKTKIDEEIKVYKKNQDSESSYKFEQDLIKVLESPRSKILKQFISLPEGLKFIVDMR SDVLKLKNQYENLNPLENELKNILCTLVDVDLLDLHQITWDSPASLLEKLIKYEAVHKISSWGDLKNRLDSDRLCFAFFH YKIPNEPLIFVEVALMNEISDSIQHLLDESVPSSDPSSASTAIFYSISNTQTGLSGISLGNFLIKRVVEKLSQEFKSVKV YATLSPVPGFTKWLKNQDVALLGKLNIKQSGTEILESIKTNIECEKQPLLKLCAHYLLKVKSSGGGAYDPVAHFHLSNGA SIKQINWMADTSEKGISQSAGIMVNYLYELPKIDNNHENYMINKVISHSKKVSAMLKE >Mature_457_residues TKESLAKTDIVKVEDQKAPKSFFKILGEVANAVRSWVGNINPDLSSSRDVDSLVLKMNECLNPKGGEVSARKNTVSLGNL YLSLSEAGQIKFLQTLAEKFNPDKTKIDEEIKVYKKNQDSESSYKFEQDLIKVLESPRSKILKQFISLPEGLKFIVDMRS DVLKLKNQYENLNPLENELKNILCTLVDVDLLDLHQITWDSPASLLEKLIKYEAVHKISSWGDLKNRLDSDRLCFAFFHY KIPNEPLIFVEVALMNEISDSIQHLLDESVPSSDPSSASTAIFYSISNTQTGLSGISLGNFLIKRVVEKLSQEFKSVKVY ATLSPVPGFTKWLKNQDVALLGKLNIKQSGTEILESIKTNIECEKQPLLKLCAHYLLKVKSSGGGAYDPVAHFHLSNGAS IKQINWMADTSEKGISQSAGIMVNYLYELPKIDNNHENYMINKVISHSKKVSAMLKE
Specific function: Unknown
COG id: COG1593
COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI110349750, Length=422, Percent_Identity=35.0710900473934, Blast_Score=240, Evalue=2e-63, Organism=Caenorhabditis elegans, GI71985309, Length=387, Percent_Identity=33.5917312661499, Blast_Score=223, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51395; Mature: 51263
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKESLAKTDIVKVEDQKAPKSFFKILGEVANAVRSWVGNINPDLSSSRDVDSLVLKMNE CCHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH CLNPKGGEVSARKNTVSLGNLYLSLSEAGQIKFLQTLAEKFNPDKTKIDEEIKVYKKNQD HCCCCCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC SESSYKFEQDLIKVLESPRSKILKQFISLPEGLKFIVDMRSDVLKLKNQYENLNPLENEL CCHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KNILCTLVDVDLLDLHQITWDSPASLLEKLIKYEAVHKISSWGDLKNRLDSDRLCFAFFH HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE YKIPNEPLIFVEVALMNEISDSIQHLLDESVPSSDPSSASTAIFYSISNTQTGLSGISLG EECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHH NFLIKRVVEKLSQEFKSVKVYATLSPVPGFTKWLKNQDVALLGKLNIKQSGTEILESIKT HHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHC NIECEKQPLLKLCAHYLLKVKSSGGGAYDPVAHFHLSNGASIKQINWMADTSEKGISQSA CCCCCCCHHHHHHHHHHHEEECCCCCCCCCHHEEEECCCCCEEEEEEECCCCHHCCCHHC GIMVNYLYELPKIDNNHENYMINKVISHSKKVSAMLKE CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKESLAKTDIVKVEDQKAPKSFFKILGEVANAVRSWVGNINPDLSSSRDVDSLVLKMNE CHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH CLNPKGGEVSARKNTVSLGNLYLSLSEAGQIKFLQTLAEKFNPDKTKIDEEIKVYKKNQD HCCCCCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC SESSYKFEQDLIKVLESPRSKILKQFISLPEGLKFIVDMRSDVLKLKNQYENLNPLENEL CCHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH KNILCTLVDVDLLDLHQITWDSPASLLEKLIKYEAVHKISSWGDLKNRLDSDRLCFAFFH HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE YKIPNEPLIFVEVALMNEISDSIQHLLDESVPSSDPSSASTAIFYSISNTQTGLSGISLG EECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHH NFLIKRVVEKLSQEFKSVKVYATLSPVPGFTKWLKNQDVALLGKLNIKQSGTEILESIKT HHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHC NIECEKQPLLKLCAHYLLKVKSSGGGAYDPVAHFHLSNGASIKQINWMADTSEKGISQSA CCCCCCCHHHHHHHHHHHEEECCCCCCCCCHHEEEECCCCCEEEEEEECCCCHHCCCHHC GIMVNYLYELPKIDNNHENYMINKVISHSKKVSAMLKE CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA