Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190570881
Identifier: 190570881
GI number: 190570881
Start: 486388
End: 487365
Strand: Reverse
Name: 190570881
Synonym: WPa_0457
Alternate gene names: NA
Gene position: 487365-486388 (Counterclockwise)
Preceding gene: 190570882
Following gene: 190570880
Centisome position: 32.88
GC content: 33.13
Gene sequence:
>978_bases ATGTTTATTTCCGTAAAAATAGTGAACAATAATACAAAGAACATTAGCCCTGCAAGATACAAAATAGCGCAGAATGTAAG AAGCTGGAGGTTAAAACAAAAATATGCTCTGAAAGACTTAGTAGATAAGACAGGGATAAAATATCATACATTGCTAAGGT ATGAGCAAGGAGCATGTGGCATTCCAATTGAAAAGTTAAAAGTGATAGCAGAGGGATTATCAATCCATGTTAGAAATCTA TTTCCTAGGCGAAAAGCGCTAAGAGAAAGTGGTTGTTTTGACGAAAGTAAGATCGAATGGATGTATAATTTTATAGCAAA AACAAGAGGACGCAAGGCAATTTATGCATTAACTAAATCTATTGGAGCTGAAGAGGAAAATAATGTAAAAGCTGCAAGAA TAAAAATAGCAAAAAATATTTTAAAGGCAGGGTTTACTAATGATATAATTTACCGAGCAGTAGGTTTATCAACTGAAGAA TATTCTGATAAAGAGAGTATACATTATACAAGCCAAAACGGAGGACAAGAGATAAAAAAGTGGAGAATAATAAGAGGATA TACGCAGGAAGAGTTAGCAAAAAAGCTTAATGTGGGACCCTCGCAGATACATCATTATGAACAGGGGAGTGTGAAAATTT TAAGTGAAAGGCTATGGGAAATAGCAGAAAAATTATCGGTGAATGCTGAAGATTTGATAAGGGAAAAAGATTGTTATGAG GATGATGAAGGAGAAAAAGAGCTATTAAGCTTGGCAAGAGAGTTAAAAAAAATTAACAATCAAGAATCACGAGATGAACT GGACATATGGGTAGAATTTTTATCGCAAAGAAAGCAAGTTTACAAAGAAAAGATTTACAAAGCAGAGGCAATAAAAGTTG CGAATAATCTACGTATGTTGGACGTTTCTATTGATGCTATTTCTAAAATAACAGATTTATCTATTGAGGAGCTTGAAAAT TATGCTTTCAAAACTTAG
Upstream 100 bases:
>100_bases GTGTGGAGGTAGTAAAGAAACCTCTCGAAAGCTTTAAACAATCGGAAACTTTTCCTCAATAAAGTTAAGCTATAGCAAAA AATTTTCTAGCAGGGTATAT
Downstream 100 bases:
>100_bases CCTGGGTTAAAAACTGCAGTAGCTTACTGACTCATAAATAATACATTAAAATATCAATAAAATAGTTGTATATTTAATAT ATCTAAATTACTGAATGAAA
Product: Putative transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MFISVKIVNNNTKNISPARYKIAQNVRSWRLKQKYALKDLVDKTGIKYHTLLRYEQGACGIPIEKLKVIAEGLSIHVRNL FPRRKALRESGCFDESKIEWMYNFIAKTRGRKAIYALTKSIGAEEENNVKAARIKIAKNILKAGFTNDIIYRAVGLSTEE YSDKESIHYTSQNGGQEIKKWRIIRGYTQEELAKKLNVGPSQIHHYEQGSVKILSERLWEIAEKLSVNAEDLIREKDCYE DDEGEKELLSLARELKKINNQESRDELDIWVEFLSQRKQVYKEKIYKAEAIKVANNLRMLDVSIDAISKITDLSIEELEN YAFKT
Sequences:
>Translated_325_residues MFISVKIVNNNTKNISPARYKIAQNVRSWRLKQKYALKDLVDKTGIKYHTLLRYEQGACGIPIEKLKVIAEGLSIHVRNL FPRRKALRESGCFDESKIEWMYNFIAKTRGRKAIYALTKSIGAEEENNVKAARIKIAKNILKAGFTNDIIYRAVGLSTEE YSDKESIHYTSQNGGQEIKKWRIIRGYTQEELAKKLNVGPSQIHHYEQGSVKILSERLWEIAEKLSVNAEDLIREKDCYE DDEGEKELLSLARELKKINNQESRDELDIWVEFLSQRKQVYKEKIYKAEAIKVANNLRMLDVSIDAISKITDLSIEELEN YAFKT >Mature_325_residues MFISVKIVNNNTKNISPARYKIAQNVRSWRLKQKYALKDLVDKTGIKYHTLLRYEQGACGIPIEKLKVIAEGLSIHVRNL FPRRKALRESGCFDESKIEWMYNFIAKTRGRKAIYALTKSIGAEEENNVKAARIKIAKNILKAGFTNDIIYRAVGLSTEE YSDKESIHYTSQNGGQEIKKWRIIRGYTQEELAKKLNVGPSQIHHYEQGSVKILSERLWEIAEKLSVNAEDLIREKDCYE DDEGEKELLSLARELKKINNQESRDELDIWVEFLSQRKQVYKEKIYKAEAIKVANNLRMLDVSIDAISKITDLSIEELEN YAFKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37655; Mature: 37655
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFISVKIVNNNTKNISPARYKIAQNVRSWRLKQKYALKDLVDKTGIKYHTLLRYEQGACG CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCC IPIEKLKVIAEGLSIHVRNLFPRRKALRESGCFDESKIEWMYNFIAKTRGRKAIYALTKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH IGAEEENNVKAARIKIAKNILKAGFTNDIIYRAVGLSTEEYSDKESIHYTSQNGGQEIKK HCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHCCCCCCEEECCCCCHHHHHH WRIIRGYTQEELAKKLNVGPSQIHHYEQGSVKILSERLWEIAEKLSVNAEDLIREKDCYE HHHHCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC DDEGEKELLSLARELKKINNQESRDELDIWVEFLSQRKQVYKEKIYKAEAIKVANNLRML CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE DVSIDAISKITDLSIEELENYAFKT EEEHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure MFISVKIVNNNTKNISPARYKIAQNVRSWRLKQKYALKDLVDKTGIKYHTLLRYEQGACG CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCC IPIEKLKVIAEGLSIHVRNLFPRRKALRESGCFDESKIEWMYNFIAKTRGRKAIYALTKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH IGAEEENNVKAARIKIAKNILKAGFTNDIIYRAVGLSTEEYSDKESIHYTSQNGGQEIKK HCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHCCCCCCEEECCCCCHHHHHH WRIIRGYTQEELAKKLNVGPSQIHHYEQGSVKILSERLWEIAEKLSVNAEDLIREKDCYE HHHHCCCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC DDEGEKELLSLARELKKINNQESRDELDIWVEFLSQRKQVYKEKIYKAEAIKVANNLRML CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE DVSIDAISKITDLSIEELENYAFKT EEEHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA