Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570882
Identifier: 190570882
GI number: 190570882
Start: 487429
End: 488670
Strand: Reverse
Name: 190570882
Synonym: WPa_0458
Alternate gene names: NA
Gene position: 488670-487429 (Counterclockwise)
Preceding gene: 190570883
Following gene: 190570881
Centisome position: 32.96
GC content: 35.1
Gene sequence:
>1242_bases ATGACTACTAAAAAAACAGTATCATTTGATGATACAGATGGAAATACTTATGAGTTAATCATTGATTCTAAAAAGTTACC AAAAGGACTATATAGTGCTATTAGGCGTACTAGCAAAAAAAATCAGCAGCTTATACTTGTAGACGAGACTGATCCGAAAA TATTTGATGATAAAAGTAGGTTTGAGAATCCTGAAGGTGTGCCTTCCCCTAGCGATGTTTCTGGAAAATCAATCAATCTT GGAGAAGGACGCGAGGTTTATAACAAAAAATCTTCAAATCGTCAAAATCCGTTTATTCCAGCCTTAAGCAAGATAGAGCC AAGTGCAAGTGAAAATGCAGAATTAAGATGGTTTAAAAGTAGAGTAGTAAAGGCAAAAAGCGTAGACGAACTGAACAAAA CTATAGATCAAGCACTAAGTACTGGAATAAGGATAAATGCGTATAGCGAAGGACAGAAGAGTTTTGCTGATACGGTGATA TCGAAAATGCCTTTGATCAAATGCAAAGAAAATGAGAAGGAAGACATAATATGTGAATTGATGCTAAATGGAGCAATATT CAGTTACGATCTATTGCAGGATAAGGGAATAAGTGAAATGCATAACAAACTGTATCAAGAGATTCGTCCACAGATAGATG AGTGGCTTAAAGAATTGAGAGAAATCGGTGAAAGTGCTATTGAAAATGAAGGAATCATAGAAGACGTGGAAATGGATAAT CAGACGTTTTTTATGAAATTTTCTGAGAATAGTAAGGTAAATATTGCAAGAGTATTGGAAGGTACAAAAAATTTAGGATT AACCACAGGAGAGGTAAAATTAGGAGGTGATGTTATAGAAATAGGAGATAGTAAGGTTGAAGTTAGAAGTGAAAAAGAAG GTGAGAGGAATTACGTTGATGTGTCTGACAATAGTGCTTTTGAGATAACATTTCCTACAAGTATTGGTAGCCTAAAAATT GTAATATACCATAATGCAGAAAATGACCATGAGATAGAGGTCAGAGTAGCAGATAAAGAAATGTGGTCTGAATTACAAAA GAAAGGGGAAAATATAGGAAAAGGGTGTTTTTTTGGAGGAATGACGGTCACAGAAGCGGTAGAAAAAGGAAGTTTCCCTA GGAGTGGTAAGTGGAGTAAAGAAAAGGTAAAAGAAGAAATAAAGGCGATTAGTAATAATGAAGCATTATCATGGGTTGAT AGGGTGTGTGGAGGTAGTAAAGAAACCTCTCGAAAGCTTTAA
Upstream 100 bases:
>100_bases TGCAGAATATACAAGATCTTTTTATAATTTGTGTATTCAGTTAATCATAAAGCAATAAATTGCTCTGTAGACTTGAATAA CATGCTTAATAGGAGGCTAT
Downstream 100 bases:
>100_bases ACAATCGGAAACTTTTCCTCAATAAAGTTAAGCTATAGCAAAAAATTTTCTAGCAGGGTATATATGTTTATTTCCGTAAA AATAGTGAACAATAATACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MTTKKTVSFDDTDGNTYELIIDSKKLPKGLYSAIRRTSKKNQQLILVDETDPKIFDDKSRFENPEGVPSPSDVSGKSINL GEGREVYNKKSSNRQNPFIPALSKIEPSASENAELRWFKSRVVKAKSVDELNKTIDQALSTGIRINAYSEGQKSFADTVI SKMPLIKCKENEKEDIICELMLNGAIFSYDLLQDKGISEMHNKLYQEIRPQIDEWLKELREIGESAIENEGIIEDVEMDN QTFFMKFSENSKVNIARVLEGTKNLGLTTGEVKLGGDVIEIGDSKVEVRSEKEGERNYVDVSDNSAFEITFPTSIGSLKI VIYHNAENDHEIEVRVADKEMWSELQKKGENIGKGCFFGGMTVTEAVEKGSFPRSGKWSKEKVKEEIKAISNNEALSWVD RVCGGSKETSRKL
Sequences:
>Translated_413_residues MTTKKTVSFDDTDGNTYELIIDSKKLPKGLYSAIRRTSKKNQQLILVDETDPKIFDDKSRFENPEGVPSPSDVSGKSINL GEGREVYNKKSSNRQNPFIPALSKIEPSASENAELRWFKSRVVKAKSVDELNKTIDQALSTGIRINAYSEGQKSFADTVI SKMPLIKCKENEKEDIICELMLNGAIFSYDLLQDKGISEMHNKLYQEIRPQIDEWLKELREIGESAIENEGIIEDVEMDN QTFFMKFSENSKVNIARVLEGTKNLGLTTGEVKLGGDVIEIGDSKVEVRSEKEGERNYVDVSDNSAFEITFPTSIGSLKI VIYHNAENDHEIEVRVADKEMWSELQKKGENIGKGCFFGGMTVTEAVEKGSFPRSGKWSKEKVKEEIKAISNNEALSWVD RVCGGSKETSRKL >Mature_412_residues TTKKTVSFDDTDGNTYELIIDSKKLPKGLYSAIRRTSKKNQQLILVDETDPKIFDDKSRFENPEGVPSPSDVSGKSINLG EGREVYNKKSSNRQNPFIPALSKIEPSASENAELRWFKSRVVKAKSVDELNKTIDQALSTGIRINAYSEGQKSFADTVIS KMPLIKCKENEKEDIICELMLNGAIFSYDLLQDKGISEMHNKLYQEIRPQIDEWLKELREIGESAIENEGIIEDVEMDNQ TFFMKFSENSKVNIARVLEGTKNLGLTTGEVKLGGDVIEIGDSKVEVRSEKEGERNYVDVSDNSAFEITFPTSIGSLKIV IYHNAENDHEIEVRVADKEMWSELQKKGENIGKGCFFGGMTVTEAVEKGSFPRSGKWSKEKVKEEIKAISNNEALSWVDR VCGGSKETSRKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46423; Mature: 46292
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKKTVSFDDTDGNTYELIIDSKKLPKGLYSAIRRTSKKNQQLILVDETDPKIFDDKSR CCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEECCHHH FENPEGVPSPSDVSGKSINLGEGREVYNKKSSNRQNPFIPALSKIEPSASENAELRWFKS CCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH RVVKAKSVDELNKTIDQALSTGIRINAYSEGQKSFADTVISKMPLIKCKENEKEDIICEL HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHH MLNGAIFSYDLLQDKGISEMHNKLYQEIRPQIDEWLKELREIGESAIENEGIIEDVEMDN HHCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC QTFFMKFSENSKVNIARVLEGTKNLGLTTGEVKLGGDVIEIGDSKVEVRSEKEGERNYVD CEEEEEECCCCCEEHHHHHCCHHCCCCEECCEEECCCEEEECCCEEEECCCCCCCCCEEE VSDNSAFEITFPTSIGSLKIVIYHNAENDHEIEVRVADKEMWSELQKKGENIGKGCFFGG ECCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEECC MTVTEAVEKGSFPRSGKWSKEKVKEEIKAISNNEALSWVDRVCGGSKETSRKL CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure TTKKTVSFDDTDGNTYELIIDSKKLPKGLYSAIRRTSKKNQQLILVDETDPKIFDDKSR CCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEECCHHH FENPEGVPSPSDVSGKSINLGEGREVYNKKSSNRQNPFIPALSKIEPSASENAELRWFKS CCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHH RVVKAKSVDELNKTIDQALSTGIRINAYSEGQKSFADTVISKMPLIKCKENEKEDIICEL HHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHH MLNGAIFSYDLLQDKGISEMHNKLYQEIRPQIDEWLKELREIGESAIENEGIIEDVEMDN HHCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC QTFFMKFSENSKVNIARVLEGTKNLGLTTGEVKLGGDVIEIGDSKVEVRSEKEGERNYVD CEEEEEECCCCCEEHHHHHCCHHCCCCEECCEEECCCEEEECCCEEEECCCCCCCCCEEE VSDNSAFEITFPTSIGSLKIVIYHNAENDHEIEVRVADKEMWSELQKKGENIGKGCFFGG ECCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEECC MTVTEAVEKGSFPRSGKWSKEKVKEEIKAISNNEALSWVDRVCGGSKETSRKL CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA