Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570838
Identifier: 190570838
GI number: 190570838
Start: 446649
End: 447098
Strand: Reverse
Name: 190570838
Synonym: WPa_0413
Alternate gene names: NA
Gene position: 447098-446649 (Counterclockwise)
Preceding gene: 190570839
Following gene: 190570837
Centisome position: 30.16
GC content: 37.56
Gene sequence:
>450_bases ATGATAAAGCTTGGTAAGAAAGAGAAATCTCTATTAGAGAGCTCATTTAAAAAGAAAGAGACGAAAAGGGAACTACATTA TGCAGTAGACGCAAAAACAGTGAGATTATTAGTCGAAAAAGGAGCGAATGTGAATGCTAAAGATGTAGAAGGATACACAG CACTGCACCTAGCGGTAACGGAGAAACGTCTAGAAATCGTGAGGGAATTGATAAAATCAGGAGGGAATGTAAATGCGGAA GAATATGGAAATAAATGCACACCGCTGCACCTTGCATGCATGATAGGCGAAAAAGAGATAGTGAAAGAATTAGTGAAGGC TGGAGGAGAAATAGAACAAGCGGATAAATTTGGAATGACAGCAATGGATTATGCGAAAAACAGTAAGGAGATCACTGAAA TATTGAAGAAAGAAATAGACAGAATTGAAAAGCTATTTATGAAGGGCTAA
Upstream 100 bases:
>100_bases TGTGAAAATTTAGCAAGCAAAATAATGAGCCAAGTAAATGAGATGATAGATGAGGTGGTGAAAAGGAAGGCTTAGGTTTA AAGAAAGGTAGGGGTAGATT
Downstream 100 bases:
>100_bases AAATATGGAGAAAGAAATAGAAAAGAAAGTAATGAATTTAGAGAAAAAACCTTTGGGTGAAATGAGAAAAATATGGAAGA AGGTATATGGGGAAGAGGCA
Product: Ankyrin repeat domain protein
Products: NA
Alternate protein names: Ankyrin; Ankyrin Repeat-Containing Protein; Ankyrin Domain Protein; Serine/Threonine Protein Kinase; MHC_I C-Terminus Family Protein; Pfs Nacht And Ankyrin Domain Protein
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MIKLGKKEKSLLESSFKKKETKRELHYAVDAKTVRLLVEKGANVNAKDVEGYTALHLAVTEKRLEIVRELIKSGGNVNAE EYGNKCTPLHLACMIGEKEIVKELVKAGGEIEQADKFGMTAMDYAKNSKEITEILKKEIDRIEKLFMKG
Sequences:
>Translated_149_residues MIKLGKKEKSLLESSFKKKETKRELHYAVDAKTVRLLVEKGANVNAKDVEGYTALHLAVTEKRLEIVRELIKSGGNVNAE EYGNKCTPLHLACMIGEKEIVKELVKAGGEIEQADKFGMTAMDYAKNSKEITEILKKEIDRIEKLFMKG >Mature_149_residues MIKLGKKEKSLLESSFKKKETKRELHYAVDAKTVRLLVEKGANVNAKDVEGYTALHLAVTEKRLEIVRELIKSGGNVNAE EYGNKCTPLHLACMIGEKEIVKELVKAGGEIEQADKFGMTAMDYAKNSKEITEILKKEIDRIEKLFMKG
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI304361760, Length=119, Percent_Identity=36.1344537815126, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI304361757, Length=119, Percent_Identity=36.1344537815126, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI68131557, Length=119, Percent_Identity=36.1344537815126, Blast_Score=74, Evalue=4e-14, Organism=Homo sapiens, GI52486251, Length=97, Percent_Identity=40.2061855670103, Blast_Score=73, Evalue=8e-14, Organism=Homo sapiens, GI52486194, Length=97, Percent_Identity=40.2061855670103, Blast_Score=73, Evalue=8e-14, Organism=Homo sapiens, GI157743284, Length=114, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI24233530, Length=119, Percent_Identity=35.2941176470588, Blast_Score=70, Evalue=6e-13, Organism=Homo sapiens, GI28605137, Length=121, Percent_Identity=35.5371900826446, Blast_Score=69, Evalue=1e-12, Organism=Homo sapiens, GI4506217, Length=121, Percent_Identity=35.5371900826446, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI89363047, Length=96, Percent_Identity=38.5416666666667, Blast_Score=67, Evalue=5e-12, Organism=Homo sapiens, GI13129098, Length=103, Percent_Identity=40.7766990291262, Blast_Score=67, Evalue=5e-12, Organism=Homo sapiens, GI56550047, Length=105, Percent_Identity=39.0476190476191, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI59850762, Length=105, Percent_Identity=39.0476190476191, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI56676397, Length=134, Percent_Identity=32.089552238806, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24667933, Length=110, Percent_Identity=38.1818181818182, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI281359521, Length=124, Percent_Identity=33.8709677419355, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI281359519, Length=124, Percent_Identity=33.8709677419355, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI28558752, Length=124, Percent_Identity=33.8709677419355, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI28558750, Length=124, Percent_Identity=33.8709677419355, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI28558756, Length=124, Percent_Identity=33.8709677419355, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI28558754, Length=124, Percent_Identity=33.8709677419355, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16755; Mature: 16755
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLGKKEKSLLESSFKKKETKRELHYAVDAKTVRLLVEKGANVNAKDVEGYTALHLAVT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHH EKRLEIVRELIKSGGNVNAEEYGNKCTPLHLACMIGEKEIVKELVKAGGEIEQADKFGMT HHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCH AMDYAKNSKEITEILKKEIDRIEKLFMKG HHHHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKLGKKEKSLLESSFKKKETKRELHYAVDAKTVRLLVEKGANVNAKDVEGYTALHLAVT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHH EKRLEIVRELIKSGGNVNAEEYGNKCTPLHLACMIGEKEIVKELVKAGGEIEQADKFGMT HHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCH AMDYAKNSKEITEILKKEIDRIEKLFMKG HHHHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA