Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is yahD [C]
Identifier: 190570839
GI number: 190570839
Start: 447124
End: 447834
Strand: Reverse
Name: yahD [C]
Synonym: WPa_0414
Alternate gene names: 190570839
Gene position: 447834-447124 (Counterclockwise)
Preceding gene: 190570840
Following gene: 190570838
Centisome position: 30.21
GC content: 36.71
Gene sequence:
>711_bases ATGAAGTTTAGCAAAGAATCTTTTAGTAAGTTTTGTAAAGAAGTATCAAGTAAGGATATTAATAAAAGAAATGAAGAAGG AGAGACGATATTACACCAAGCAGTAGAAATCTCCAATTACAAAACAGTGAGGTTCTTAATAAAGAAAGGAGCAGAGGTAA ATGCAAGAGATAAAAATGGTTATACACCTCTGCACTGTGCAGTATTTGCGAAAAGCTTAGAAAATGTAAAAGTGCTGCTA AGAGAAGGAGCGGAAGTAAATGCTACTCAATATGTCACTGGATGTACGCCACTCCACTCTGCGTGCAAAATAGGAGGAGC AGGAGTTGAAATAATAAAAGAGCTAGTGAAGGCCGGAGCTGAAGTTAATCAACTGAATAAGTATGGTGCAACACCAATGT ATTACATCTGGGAAAGTGAAAAGTATTGCCTATGTGATAGCAAAGAGAGTGAAAAGGCAAGTAAATTTTTGAGAGAAAAA GGAGGAATAACAAAAAGTAGAGAACTGACGTGCTATGGAATAGAGGGGCTAGTGGGAGAAATAGCAGACATGTTGAATGG AAGCTACATGCCGGAGCTAAAAATAATAGAGATAGGAGAAATAAGAAAGAGAGACAAATCACTAATAAAGGAAGAATGTG AAAATTTAGCAAGCAAAATAATGAGCCAAGTAAATGAGATGATAGATGAGGTGGTGAAAAGGAAGGCTTAG
Upstream 100 bases:
>100_bases GGACTTGCTTTCTCATGCTAAAAAGGACATGACTTGAATAGCGGCAGGTAAATATAAGAAATTTGTCTGGCGCTAGAAAA GCTAATTTTGTGAGGTAAGT
Downstream 100 bases:
>100_bases GTTTAAAGAAAGGTAGGGGTAGATTATGATAAAGCTTGGTAAGAAAGAGAAATCTCTATTAGAGAGCTCATTTAAAAAGA AAGAGACGAAAAGGGAACTA
Product: ankyrin repeat domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MKFSKESFSKFCKEVSSKDINKRNEEGETILHQAVEISNYKTVRFLIKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLL REGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLNKYGATPMYYIWESEKYCLCDSKESEKASKFLREK GGITKSRELTCYGIEGLVGEIADMLNGSYMPELKIIEIGEIRKRDKSLIKEECENLASKIMSQVNEMIDEVVKRKA
Sequences:
>Translated_236_residues MKFSKESFSKFCKEVSSKDINKRNEEGETILHQAVEISNYKTVRFLIKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLL REGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLNKYGATPMYYIWESEKYCLCDSKESEKASKFLREK GGITKSRELTCYGIEGLVGEIADMLNGSYMPELKIIEIGEIRKRDKSLIKEECENLASKIMSQVNEMIDEVVKRKA >Mature_236_residues MKFSKESFSKFCKEVSSKDINKRNEEGETILHQAVEISNYKTVRFLIKKGAEVNARDKNGYTPLHCAVFAKSLENVKVLL REGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGAEVNQLNKYGATPMYYIWESEKYCLCDSKESEKASKFLREK GGITKSRELTCYGIEGLVGEIADMLNGSYMPELKIIEIGEIRKRDKSLIKEECENLASKIMSQVNEMIDEVVKRKA
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 18 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI134948558, Length=114, Percent_Identity=42.1052631578947, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI134948605, Length=114, Percent_Identity=42.1052631578947, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI304361760, Length=127, Percent_Identity=37.007874015748, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI304361757, Length=127, Percent_Identity=37.007874015748, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI68131557, Length=127, Percent_Identity=37.007874015748, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI24233530, Length=127, Percent_Identity=39.3700787401575, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI157743284, Length=115, Percent_Identity=40, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI157266328, Length=134, Percent_Identity=38.8059701492537, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI256574792, Length=157, Percent_Identity=34.3949044585987, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI164664508, Length=137, Percent_Identity=35.7664233576642, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI89363047, Length=116, Percent_Identity=39.6551724137931, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI87239981, Length=137, Percent_Identity=36.4963503649635, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI187608777, Length=115, Percent_Identity=38.2608695652174, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI28605137, Length=113, Percent_Identity=38.0530973451327, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI4506217, Length=113, Percent_Identity=38.0530973451327, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI41350198, Length=106, Percent_Identity=39.622641509434, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI56676397, Length=114, Percent_Identity=40.3508771929825, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI52486251, Length=135, Percent_Identity=35.5555555555556, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI52486194, Length=135, Percent_Identity=35.5555555555556, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI30425444, Length=126, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI70780355, Length=152, Percent_Identity=32.2368421052632, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI18252778, Length=116, Percent_Identity=32.7586206896552, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI70780353, Length=152, Percent_Identity=32.2368421052632, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI70780359, Length=152, Percent_Identity=32.2368421052632, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI70780357, Length=113, Percent_Identity=37.1681415929204, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI215598574, Length=113, Percent_Identity=37.1681415929204, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI13376842, Length=130, Percent_Identity=35.3846153846154, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI188595682, Length=115, Percent_Identity=36.5217391304348, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI52426737, Length=115, Percent_Identity=36.5217391304348, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI16975496, Length=116, Percent_Identity=37.9310344827586, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI215820635, Length=111, Percent_Identity=36.9369369369369, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI63003907, Length=111, Percent_Identity=36.9369369369369, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI32967601, Length=144, Percent_Identity=32.6388888888889, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI115533713, Length=181, Percent_Identity=32.5966850828729, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17561074, Length=80, Percent_Identity=42.5, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983513, Length=117, Percent_Identity=34.1880341880342, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71983519, Length=117, Percent_Identity=34.1880341880342, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24654624, Length=134, Percent_Identity=35.8208955223881, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI161082089, Length=160, Percent_Identity=31.875, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI281359521, Length=120, Percent_Identity=35.8333333333333, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI281359519, Length=120, Percent_Identity=35.8333333333333, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI28558752, Length=120, Percent_Identity=35.8333333333333, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI28558750, Length=120, Percent_Identity=35.8333333333333, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI28558756, Length=120, Percent_Identity=35.8333333333333, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI28558754, Length=120, Percent_Identity=35.8333333333333, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI161082085, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI161082099, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI45553307, Length=111, Percent_Identity=36.9369369369369, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24644921, Length=111, Percent_Identity=36.9369369369369, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24644919, Length=111, Percent_Identity=36.9369369369369, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI161082110, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI21356741, Length=142, Percent_Identity=32.3943661971831, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI161082106, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI161082096, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI161082081, Length=160, Percent_Identity=31.875, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24581260, Length=115, Percent_Identity=37.3913043478261, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24581258, Length=115, Percent_Identity=37.3913043478261, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI161077991, Length=121, Percent_Identity=38.8429752066116, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI161077993, Length=105, Percent_Identity=41.9047619047619, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24643883, Length=121, Percent_Identity=38.8429752066116, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI17998549, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI221472807, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552223, Length=112, Percent_Identity=36.6071428571429, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28571867, Length=125, Percent_Identity=36, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI28571865, Length=125, Percent_Identity=36, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 - InterPro: IPR007685 [H]
Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]
EC number: NA
Molecular weight: Translated: 26452; Mature: 26452
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSKESFSKFCKEVSSKDINKRNEEGETILHQAVEISNYKTVRFLIKKGAEVNARDKNG CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC YTPLHCAVFAKSLENVKVLLREGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGA CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHCCCCHHHHHHHHHHCCC EVNQLNKYGATPMYYIWESEKYCLCDSKESEKASKFLREKGGITKSRELTCYGIEGLVGE HHHHHHHHCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHHH IADMLNGSYMPELKIIEIGEIRKRDKSLIKEECENLASKIMSQVNEMIDEVVKRKA HHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFSKESFSKFCKEVSSKDINKRNEEGETILHQAVEISNYKTVRFLIKKGAEVNARDKNG CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC YTPLHCAVFAKSLENVKVLLREGAEVNATQYVTGCTPLHSACKIGGAGVEIIKELVKAGA CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCHHHHHHHCCCCHHHHHHHHHHCCC EVNQLNKYGATPMYYIWESEKYCLCDSKESEKASKFLREKGGITKSRELTCYGIEGLVGE HHHHHHHHCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHHH IADMLNGSYMPELKIIEIGEIRKRDKSLIKEECENLASKIMSQVNEMIDEVVKRKA HHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA