Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is mutL [H]
Identifier: 190570725
GI number: 190570725
Start: 282022
End: 283830
Strand: Reverse
Name: mutL [H]
Synonym: WPa_0278
Alternate gene names: 190570725
Gene position: 283830-282022 (Counterclockwise)
Preceding gene: 190570726
Following gene: 190570724
Centisome position: 19.15
GC content: 35.82
Gene sequence:
>1809_bases ATGGCAATAATTCTTTTAGATACAAAAACAATAAATCGTATAGCAGCAGGTGAAGTAATCGAAAGGCCAGCAAGTGTAGT AAAGGAATTAGTAGAAAATGCAATAGATGCTGGAAGTTCAGAAATAGAGATCAAAATAGAAAGTGGTGGGCGTAACCTTA TCACTGTGACAGATAATGGAAATGGAATAGAAAAGGAAGATTTGGAACTTGCGTTTATGCGCCACGCTACTTCAAAATTA AGCGATGGTGAATTAATAGAGATCAGACATCTTGGCTTTAGAGGAGAGGCTCTGCCTTCAATTGCAGCAGTAAGCAGAAT GAAATTATCATCCAAGGCAAGTGGAGCAAAGGAAGCATGGTCTATAAGATATGAGGGAGGAGAAAAAGTAAGAGAGATTA CCCCTTGTTCTTTGTTGCAAGGTACATATATTGAAGTTCGTGACTTATTTTTTGCTACACCAAATAGACTAAAGTTTCTA AAAACCGAAAGGGCAGAAACACAAAGTATTGTTGATATTGTGAATAACTTAGCGATGATTAATTATAGTATTGGGTTTAC TCTCACTTCTGGTAATAAAAAGCTCTTAAAATATGTTAAGCAAACTTCGCTGTTCAACAGATTATGTGAAATAGAAAAAG AATTTCAAAGCAATTCACTGGAAGTTAAAGAGGAAGAAGAAGGCATCAAACTTAAGGGACACATCTGTAAACCTAATGTC AATCGTGGCAACTCAACTCAGATTTATACGTTTGTTAATGGAAGGCCAATGAAAGACAATCTACTTGTTGGTGCAATTAG GTATGCGTATCACGATTTTATTCCAAACAATAGGTATCCTTTTGCAGTGTTGCATTTAGAAGTACCATATGACCAAGTAG ATGTAAATGTGCATCCAAATAAATCGGAAGTAAGATTTCAGAATAAAAGGCTAATATATGAAATAGTGAGAAGAGGGATA ATAAAAACACTATCAACGAGATTTGCAGCGGGTGATCAAGGTATTGAAGAGGAGCTAATTTTTAATGATAGTAAAAGCCA AGAGCAGATTGATAGTCAAGAGAAAAAAGATCAAAAAGAGTTTTATGAAAAGAGACCAAGTCTTTTAGAAAATCGTCTAA TGAAAGAGTTCAATGCACCAGATGAAAGAAGGCAAAGCTTACCAGAAACTTTTAAGTATGGAGAATCCCCACCCCAAAAG GGAACGATGGTTTTAGAAAGGAAGCAAATTGATTTAATAGCGGATCATCCTCTAGGATATGCACGCTGTCAGGTCTACAA TACTTACATTATTGCTGAGGCTAAAGGAAAATTAATTATAGTAGACCAGCACGCAGCTCATGAGAGATTGATATACGAGT GCTTAACAAGCATAAAAAGACAAAAATTTCTTCTTCCTGAAACAGTTGAGATTAAAAACCAAGCAGGAATGGAGATGGTT GGAATGTATAAAGATAGGCTCTTTGAAATGGGTTTTGGTATTGAAATAGAATCAGAAGATAAAGTAAGGGTGAAAGAAAT ACCTGCAATTTTAGGAACAATAAATGTGAAAGAGATGGTGATGAATATAGTTGATAGATTAATGGAGATAGGAGATACGC TACCTATAGAAGAAAAAGTGAACAAGATACTAGCTACCATTGCGTGCCATGGGTCAATTAGAGCTGGAAGGGCAATGAAG TTGGAGGAGATGAATGAGTTGATGAGACAAATGGAGGAAACACCTTATGCTGGGCAATGCAATCACGGAAGACCAACGTA TATAGAAATGAAACTAAGTGATATAGAAAAATTGTTTGAAAGGAGATGA
Upstream 100 bases:
>100_bases CTAGAAAGGAATCTAAAAATCTAAAATATAGAGATTGTGAGGTCAAGAAATCACCAAAAAATAGAGGGAACTCTAAGTTT CATAGATTGGGTGGAGTATT
Downstream 100 bases:
>100_bases GTTCAGTTTGTCAAAAAGGTTCCCAATTAAGTATAAGTAACGGCTCTTCTGATTATGAGTATAAAATGTGAAAAAAGAGA ATAAATGCTCTAATTTTTTA
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSSEIEIKIESGGRNLITVTDNGNGIEKEDLELAFMRHATSKL SDGELIEIRHLGFRGEALPSIAAVSRMKLSSKASGAKEAWSIRYEGGEKVREITPCSLLQGTYIEVRDLFFATPNRLKFL KTERAETQSIVDIVNNLAMINYSIGFTLTSGNKKLLKYVKQTSLFNRLCEIEKEFQSNSLEVKEEEEGIKLKGHICKPNV NRGNSTQIYTFVNGRPMKDNLLVGAIRYAYHDFIPNNRYPFAVLHLEVPYDQVDVNVHPNKSEVRFQNKRLIYEIVRRGI IKTLSTRFAAGDQGIEEELIFNDSKSQEQIDSQEKKDQKEFYEKRPSLLENRLMKEFNAPDERRQSLPETFKYGESPPQK GTMVLERKQIDLIADHPLGYARCQVYNTYIIAEAKGKLIIVDQHAAHERLIYECLTSIKRQKFLLPETVEIKNQAGMEMV GMYKDRLFEMGFGIEIESEDKVRVKEIPAILGTINVKEMVMNIVDRLMEIGDTLPIEEKVNKILATIACHGSIRAGRAMK LEEMNELMRQMEETPYAGQCNHGRPTYIEMKLSDIEKLFERR
Sequences:
>Translated_602_residues MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSSEIEIKIESGGRNLITVTDNGNGIEKEDLELAFMRHATSKL SDGELIEIRHLGFRGEALPSIAAVSRMKLSSKASGAKEAWSIRYEGGEKVREITPCSLLQGTYIEVRDLFFATPNRLKFL KTERAETQSIVDIVNNLAMINYSIGFTLTSGNKKLLKYVKQTSLFNRLCEIEKEFQSNSLEVKEEEEGIKLKGHICKPNV NRGNSTQIYTFVNGRPMKDNLLVGAIRYAYHDFIPNNRYPFAVLHLEVPYDQVDVNVHPNKSEVRFQNKRLIYEIVRRGI IKTLSTRFAAGDQGIEEELIFNDSKSQEQIDSQEKKDQKEFYEKRPSLLENRLMKEFNAPDERRQSLPETFKYGESPPQK GTMVLERKQIDLIADHPLGYARCQVYNTYIIAEAKGKLIIVDQHAAHERLIYECLTSIKRQKFLLPETVEIKNQAGMEMV GMYKDRLFEMGFGIEIESEDKVRVKEIPAILGTINVKEMVMNIVDRLMEIGDTLPIEEKVNKILATIACHGSIRAGRAMK LEEMNELMRQMEETPYAGQCNHGRPTYIEMKLSDIEKLFERR >Mature_601_residues AIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSSEIEIKIESGGRNLITVTDNGNGIEKEDLELAFMRHATSKLS DGELIEIRHLGFRGEALPSIAAVSRMKLSSKASGAKEAWSIRYEGGEKVREITPCSLLQGTYIEVRDLFFATPNRLKFLK TERAETQSIVDIVNNLAMINYSIGFTLTSGNKKLLKYVKQTSLFNRLCEIEKEFQSNSLEVKEEEEGIKLKGHICKPNVN RGNSTQIYTFVNGRPMKDNLLVGAIRYAYHDFIPNNRYPFAVLHLEVPYDQVDVNVHPNKSEVRFQNKRLIYEIVRRGII KTLSTRFAAGDQGIEEELIFNDSKSQEQIDSQEKKDQKEFYEKRPSLLENRLMKEFNAPDERRQSLPETFKYGESPPQKG TMVLERKQIDLIADHPLGYARCQVYNTYIIAEAKGKLIIVDQHAAHERLIYECLTSIKRQKFLLPETVEIKNQAGMEMVG MYKDRLFEMGFGIEIESEDKVRVKEIPAILGTINVKEMVMNIVDRLMEIGDTLPIEEKVNKILATIACHGSIRAGRAMKL EEMNELMRQMEETPYAGQCNHGRPTYIEMKLSDIEKLFERR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=322, Percent_Identity=36.9565217391304, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI4505913, Length=353, Percent_Identity=28.0453257790368, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI310128478, Length=353, Percent_Identity=28.0453257790368, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI4505911, Length=330, Percent_Identity=29.0909090909091, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI189458898, Length=333, Percent_Identity=28.8288288288288, Blast_Score=126, Evalue=7e-29, Organism=Homo sapiens, GI189458896, Length=313, Percent_Identity=27.7955271565495, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI310128480, Length=305, Percent_Identity=26.2295081967213, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI263191589, Length=231, Percent_Identity=31.1688311688312, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI91992162, Length=355, Percent_Identity=25.0704225352113, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI91992160, Length=355, Percent_Identity=25.0704225352113, Blast_Score=76, Evalue=8e-14, Organism=Escherichia coli, GI1790612, Length=351, Percent_Identity=40.1709401709402, Blast_Score=248, Evalue=8e-67, Organism=Caenorhabditis elegans, GI71991825, Length=317, Percent_Identity=32.4921135646688, Blast_Score=161, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17562796, Length=347, Percent_Identity=26.2247838616715, Blast_Score=120, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323819, Length=322, Percent_Identity=35.4037267080745, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6324247, Length=412, Percent_Identity=26.4563106796117, Blast_Score=128, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6325093, Length=172, Percent_Identity=27.906976744186, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323063, Length=196, Percent_Identity=27.5510204081633, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI17136968, Length=320, Percent_Identity=33.125, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI17136970, Length=350, Percent_Identity=24.2857142857143, Blast_Score=110, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 68708; Mature: 68577
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSSEIEIKIESGGRNLITVTDNG CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCC NGIEKEDLELAFMRHATSKLSDGELIEIRHLGFRGEALPSIAAVSRMKLSSKASGAKEAW CCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHE SIRYEGGEKVREITPCSLLQGTYIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI EEEECCCCHHHHCCCHHHHCCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEE NYSIGFTLTSGNKKLLKYVKQTSLFNRLCEIEKEFQSNSLEVKEEEEGIKLKGHICKPNV EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCC NRGNSTQIYTFVNGRPMKDNLLVGAIRYAYHDFIPNNRYPFAVLHLEVPYDQVDVNVHPN CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCC KSEVRFQNKRLIYEIVRRGIIKTLSTRFAAGDQGIEEELIFNDSKSQEQIDSQEKKDQKE CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCHHHHHHHHHHHHHH FYEKRPSLLENRLMKEFNAPDERRQSLPETFKYGESPPQKGTMVLERKQIDLIADHPLGY HHHHCHHHHHHHHHHHCCCCHHHHHCCCHHHHCCCCCCCCCCEEEEECCEEEEECCCCCC ARCQVYNTYIIAEAKGKLIIVDQHAAHERLIYECLTSIKRQKFLLPETVEIKNQAGMEMV EEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHH GMYKDRLFEMGFGIEIESEDKVRVKEIPAILGTINVKEMVMNIVDRLMEIGDTLPIEEKV HHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHH NKILATIACHGSIRAGRAMKLEEMNELMRQMEETPYAGQCNHGRPTYIEMKLSDIEKLFE HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHH RR CC >Mature Secondary Structure AIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSSEIEIKIESGGRNLITVTDNG EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCC NGIEKEDLELAFMRHATSKLSDGELIEIRHLGFRGEALPSIAAVSRMKLSSKASGAKEAW CCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHE SIRYEGGEKVREITPCSLLQGTYIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI EEEECCCCHHHHCCCHHHHCCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEE NYSIGFTLTSGNKKLLKYVKQTSLFNRLCEIEKEFQSNSLEVKEEEEGIKLKGHICKPNV EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCC NRGNSTQIYTFVNGRPMKDNLLVGAIRYAYHDFIPNNRYPFAVLHLEVPYDQVDVNVHPN CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCC KSEVRFQNKRLIYEIVRRGIIKTLSTRFAAGDQGIEEELIFNDSKSQEQIDSQEKKDQKE CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCHHHHHHHHHHHHHH FYEKRPSLLENRLMKEFNAPDERRQSLPETFKYGESPPQKGTMVLERKQIDLIADHPLGY HHHHCHHHHHHHHHHHCCCCHHHHHCCCHHHHCCCCCCCCCCEEEEECCEEEEECCCCCC ARCQVYNTYIIAEAKGKLIIVDQHAAHERLIYECLTSIKRQKFLLPETVEIKNQAGMEMV EEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHH GMYKDRLFEMGFGIEIESEDKVRVKEIPAILGTINVKEMVMNIVDRLMEIGDTLPIEEKV HHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHH NKILATIACHGSIRAGRAMKLEEMNELMRQMEETPYAGQCNHGRPTYIEMKLSDIEKLFE HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHH RR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA