Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570710
Identifier: 190570710
GI number: 190570710
Start: 267301
End: 268692
Strand: Reverse
Name: 190570710
Synonym: WPa_0262
Alternate gene names: NA
Gene position: 268692-267301 (Counterclockwise)
Preceding gene: 190570718
Following gene: 190570709
Centisome position: 18.12
GC content: 35.7
Gene sequence:
>1392_bases TTGATCAGTATTGTAGAGTTATGTAAAAACTTAGAGCAAAAAGTAGCAAAGCTTGAAGAAAAAAATAAAATCTTAGAAAT AGAGAATGCTGAACTAAGAGAGAGACTTGGCTTGAACTCAAGGAATTCATCTTTACCAAGTTCAAAAGAGCTGTACAAAA TAAAAAAAGACACACCAGAAGATAAGTCAGAGGGTGGCAGGAAGATAGGGGGTCAAGTTGGTCATAAAGGAAATTATCGG ATAAAAATGGAAGCAGATGAAGTAATTAGAGTAAGATTACATGATACTTGTGAATGTGGTGGAGAAATTGCAGTATGCAA CAAACCCTATATTCACCAGAATGTTGATCTCCCAAAAATTAAGCCTTACGTAGTGGAATACCAACTAGAACATGGGCGCT GTCGTAAATGCGGAAAAAGAAGGAGTAGCAAATTACCAGAAGGAGTTACACCTGATACCTTTGGTCCTAGAGCTAAGTCA GTAGTTGCATCACTAAGTGGGTTTTATAAGAATTCAAAGCGAGAAATAGCGAATATTATGAAAGACATCTTTAACATGAG TATAAGTGTTGGTAGTGTGTCCAACAGCGAAGCAAGGGTCTCATCAAAATGTAAAGAAGTCTATGAACAAATAGAGGAAG AAATGAAAGCAAGCGAAATTTTGCATATTGATGAAATCAGTCACTACAACAAAGGCAAGTTGGGATGGTGCTGGATGTTT GCCAACAATAACGCAAGTCTTATGAAGTTAGCAGATACAAGAGGAATGAGGTTTTTAAAGAATAGTGCATTTTGTGATTA CAAAAATCGTGTAATTACCGACAGATATGCAGTTTACAACTACTTCAGTGATGAAAAACGACAAATTTGTTGGGCTCACT TGTTGAGAAATTTCGAGAGGTTATCTCATAGCTGGAATAGTGAAGTAATGAGACTTGGCAATTGTTTAAAAGATGCAGCT AATGGATTATTTGCATTAAAAAATGCTTTGTCAGAAAATGAAATTAGTATTTCAAAGTTCACTAAGCAATCTAAAGAGTT GCGAAGATTTATGCAGTACTGCATGATAAAAATATCTTATATACTTGAAGCAAAAGGAGCTTCACGAACGGTAAAGGGTA TTATAAAATCCGAGCCAATGATGTGGACATTTTTGGATGACCCAAAGAATATTCCATTAACGAATAATCATGTTGAACGA CAAATACGGCGTTATGTTGTCTATCGTAAGAATTCATATTTTGCACAGTCAGAGCGAGGGAATAGATTCCTTGAGCGGAT AATTTCTCTGTATCTCACTTGGAGACAAAAAAAAGTTAAATCCATTTCAAAACCTTTTATCTATTGTCTCTTAAGCCGCA CCTCTGAACGGATACCCGTAATTGGGTTTTAA
Upstream 100 bases:
>100_bases TTGTATCCGTTCAGAGGTATGGTAAGGATAAAAAAGAATTGACATAACATATCAAAGTAATAATAACAGAAAATGTTGAT AGTAAGGTAAGGCTAAATTG
Downstream 100 bases:
>100_bases AGCGATTCTACAACCTCAGGGTACAACATACCACCAAGACCCAAGTTACTCATATAGGGTAGCTTAAAACTCGATTATGA GGTACTTCTAAAGTATCTTT
Product: Putative transposase
Products: NA
Alternate protein names: Transposase IS; Transposase Degenerate; Transposase Is; Transposase And Inactivated Derivative; Transposase Of
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MISIVELCKNLEQKVAKLEEKNKILEIENAELRERLGLNSRNSSLPSSKELYKIKKDTPEDKSEGGRKIGGQVGHKGNYR IKMEADEVIRVRLHDTCECGGEIAVCNKPYIHQNVDLPKIKPYVVEYQLEHGRCRKCGKRRSSKLPEGVTPDTFGPRAKS VVASLSGFYKNSKREIANIMKDIFNMSISVGSVSNSEARVSSKCKEVYEQIEEEMKASEILHIDEISHYNKGKLGWCWMF ANNNASLMKLADTRGMRFLKNSAFCDYKNRVITDRYAVYNYFSDEKRQICWAHLLRNFERLSHSWNSEVMRLGNCLKDAA NGLFALKNALSENEISISKFTKQSKELRRFMQYCMIKISYILEAKGASRTVKGIIKSEPMMWTFLDDPKNIPLTNNHVER QIRRYVVYRKNSYFAQSERGNRFLERIISLYLTWRQKKVKSISKPFIYCLLSRTSERIPVIGF
Sequences:
>Translated_463_residues MISIVELCKNLEQKVAKLEEKNKILEIENAELRERLGLNSRNSSLPSSKELYKIKKDTPEDKSEGGRKIGGQVGHKGNYR IKMEADEVIRVRLHDTCECGGEIAVCNKPYIHQNVDLPKIKPYVVEYQLEHGRCRKCGKRRSSKLPEGVTPDTFGPRAKS VVASLSGFYKNSKREIANIMKDIFNMSISVGSVSNSEARVSSKCKEVYEQIEEEMKASEILHIDEISHYNKGKLGWCWMF ANNNASLMKLADTRGMRFLKNSAFCDYKNRVITDRYAVYNYFSDEKRQICWAHLLRNFERLSHSWNSEVMRLGNCLKDAA NGLFALKNALSENEISISKFTKQSKELRRFMQYCMIKISYILEAKGASRTVKGIIKSEPMMWTFLDDPKNIPLTNNHVER QIRRYVVYRKNSYFAQSERGNRFLERIISLYLTWRQKKVKSISKPFIYCLLSRTSERIPVIGF >Mature_463_residues MISIVELCKNLEQKVAKLEEKNKILEIENAELRERLGLNSRNSSLPSSKELYKIKKDTPEDKSEGGRKIGGQVGHKGNYR IKMEADEVIRVRLHDTCECGGEIAVCNKPYIHQNVDLPKIKPYVVEYQLEHGRCRKCGKRRSSKLPEGVTPDTFGPRAKS VVASLSGFYKNSKREIANIMKDIFNMSISVGSVSNSEARVSSKCKEVYEQIEEEMKASEILHIDEISHYNKGKLGWCWMF ANNNASLMKLADTRGMRFLKNSAFCDYKNRVITDRYAVYNYFSDEKRQICWAHLLRNFERLSHSWNSEVMRLGNCLKDAA NGLFALKNALSENEISISKFTKQSKELRRFMQYCMIKISYILEAKGASRTVKGIIKSEPMMWTFLDDPKNIPLTNNHVER QIRRYVVYRKNSYFAQSERGNRFLERIISLYLTWRQKKVKSISKPFIYCLLSRTSERIPVIGF
Specific function: Unknown
COG id: COG3436
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53649; Mature: 53649
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISIVELCKNLEQKVAKLEEKNKILEIENAELRERLGLNSRNSSLPSSKELYKIKKDTPE CCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCCCCHHHHHEECCCCCC DKSEGGRKIGGQVGHKGNYRIKMEADEVIRVRLHDTCECGGEIAVCNKPYIHQNVDLPKI CHHCCCCCCCCCCCCCCCEEEEECHHHEEEEEECCHHCCCCEEEECCCCCCCCCCCCCCC KPYVVEYQLEHGRCRKCGKRRSSKLPEGVTPDTFGPRAKSVVASLSGFYKNSKREIANIM CCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH KDIFNMSISVGSVSNSEARVSSKCKEVYEQIEEEMKASEILHIDEISHYNKGKLGWCWMF HHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHCCCCCCCEEEEEEE ANNNASLMKLADTRGMRFLKNSAFCDYKNRVITDRYAVYNYFSDEKRQICWAHLLRNFER ECCCCCEEEEHHHHCHHHHHCCCCCCCCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHHHH LSHSWNSEVMRLGNCLKDAANGLFALKNALSENEISISKFTKQSKELRRFMQYCMIKISY HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILEAKGASRTVKGIIKSEPMMWTFLDDPKNIPLTNNHVERQIRRYVVYRKNSYFAQSERG HHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCHHH NRFLERIISLYLTWRQKKVKSISKPFIYCLLSRTSERIPVIGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MISIVELCKNLEQKVAKLEEKNKILEIENAELRERLGLNSRNSSLPSSKELYKIKKDTPE CCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCCCCHHHHHEECCCCCC DKSEGGRKIGGQVGHKGNYRIKMEADEVIRVRLHDTCECGGEIAVCNKPYIHQNVDLPKI CHHCCCCCCCCCCCCCCCEEEEECHHHEEEEEECCHHCCCCEEEECCCCCCCCCCCCCCC KPYVVEYQLEHGRCRKCGKRRSSKLPEGVTPDTFGPRAKSVVASLSGFYKNSKREIANIM CCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH KDIFNMSISVGSVSNSEARVSSKCKEVYEQIEEEMKASEILHIDEISHYNKGKLGWCWMF HHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHCCCCCCCEEEEEEE ANNNASLMKLADTRGMRFLKNSAFCDYKNRVITDRYAVYNYFSDEKRQICWAHLLRNFER ECCCCCEEEEHHHHCHHHHHCCCCCCCCCCEEHHHHHHHHHHCHHHHHHHHHHHHHHHHH LSHSWNSEVMRLGNCLKDAANGLFALKNALSENEISISKFTKQSKELRRFMQYCMIKISY HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILEAKGASRTVKGIIKSEPMMWTFLDDPKNIPLTNNHVERQIRRYVVYRKNSYFAQSERG HHHCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCHHH NRFLERIISLYLTWRQKKVKSISKPFIYCLLSRTSERIPVIGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA