Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is pld [H]
Identifier: 190570718
GI number: 190570718
Start: 275469
End: 275975
Strand: Reverse
Name: pld [H]
Synonym: WPa_0271
Alternate gene names: 190570718
Gene position: 275975-275469 (Counterclockwise)
Preceding gene: 190570720
Following gene: 190570710
Centisome position: 18.62
GC content: 33.14
Gene sequence:
>507_bases TTGATTTTATTAACTTGCTCACTTTTATCAGGGTGTGTTACCTGTCCAAAAACTACAGTCTGTTTTACACCTAGGGAAAA TTGTGCCGAACAAATAACCAATGCTATAGATCAAGCTCAAAAATCCATATTAATTCAGGCATACACGTTTACTTCAAAGC CAATTGCACAATCTTTAATTAGAGCAAAAAAACGTGGTGTTGATATTAAGGTCATTCTAGATGAATCACAGATCAGCTCA AAATACAGTGTCATCAATGAATTGTTTTATCAAAAGATACCGGTATACATAGACTATAAACCTGCAATTTCACACAGCAA AATTATGATCATTGATAATCAAAAAATCATAACTGGATCTTTTAATTTTTCCGATGCGGCACAGAAAAAAAATGCTGAGA ATCTACTGGTTATAACAGGAAGCCCTTCATTAGTTGAACAATACGTTGAAAATTGGAAAGATCGTCAATTGCAATCTAGG CCTTATACGCCATTAATAGAAAATTGA
Upstream 100 bases:
>100_bases GTTCTTCTTGTTCTTTTTTCTATTTCTGCTAATATTATGGCTGGTATGATGCCTCTTATGCCTCCGCCGTCAACTGAAAG GATGTATTTTGCCATATTTA
Downstream 100 bases:
>100_bases TTACTCACATTTTAAGTTGCTAGCTTTAAAATCATCCAACTCTTCAGAAAGATTTTTTACCCTTTCCTCAAGTACTAACA CTTTTTCCATTAAACCATAT
Product: Putative endonuclease
Products: NA
Alternate protein names: PLD; Choline phosphatase [H]
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MILLTCSLLSGCVTCPKTTVCFTPRENCAEQITNAIDQAQKSILIQAYTFTSKPIAQSLIRAKKRGVDIKVILDESQISS KYSVINELFYQKIPVYIDYKPAISHSKIMIIDNQKIITGSFNFSDAAQKKNAENLLVITGSPSLVEQYVENWKDRQLQSR PYTPLIEN
Sequences:
>Translated_168_residues MILLTCSLLSGCVTCPKTTVCFTPRENCAEQITNAIDQAQKSILIQAYTFTSKPIAQSLIRAKKRGVDIKVILDESQISS KYSVINELFYQKIPVYIDYKPAISHSKIMIIDNQKIITGSFNFSDAAQKKNAENLLVITGSPSLVEQYVENWKDRQLQSR PYTPLIEN >Mature_168_residues MILLTCSLLSGCVTCPKTTVCFTPRENCAEQITNAIDQAQKSILIQAYTFTSKPIAQSLIRAKKRGVDIKVILDESQISS KYSVINELFYQKIPVYIDYKPAISHSKIMIIDNQKIITGSFNFSDAAQKKNAENLLVITGSPSLVEQYVENWKDRQLQSR PYTPLIEN
Specific function: Could be a virulence factor [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PLD phosphodiesterase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001736 [H]
Pfam domain/function: NA
EC number: =3.1.4.4 [H]
Molecular weight: Translated: 18937; Mature: 18937
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLTCSLLSGCVTCPKTTVCFTPRENCAEQITNAIDQAQKSILIQAYTFTSKPIAQSLI CEEEEEEHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHH RAKKRGVDIKVILDESQISSKYSVINELFYQKIPVYIDYKPAISHSKIMIIDNQKIITGS HHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCEEEEEC FNFSDAAQKKNAENLLVITGSPSLVEQYVENWKDRQLQSRPYTPLIEN CCCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MILLTCSLLSGCVTCPKTTVCFTPRENCAEQITNAIDQAQKSILIQAYTFTSKPIAQSLI CEEEEEEHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHH RAKKRGVDIKVILDESQISSKYSVINELFYQKIPVYIDYKPAISHSKIMIIDNQKIITGS HHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCEEEEEC FNFSDAAQKKNAENLLVITGSPSLVEQYVENWKDRQLQSRPYTPLIEN CCCCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]