| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is 190570626
Identifier: 190570626
GI number: 190570626
Start: 176646
End: 177029
Strand: Reverse
Name: 190570626
Synonym: WPa_0168
Alternate gene names: NA
Gene position: 177029-176646 (Counterclockwise)
Preceding gene: 190570627
Following gene: 190570624
Centisome position: 11.94
GC content: 32.81
Gene sequence:
>384_bases ATGTCACAAAAAATGAGAGTCAGTAACTGCCATGAATATAACAAATTTCTCCAAGAGAGGGGAAATATTTTTCATTTTAT TAATGAAGCAATTGAGAATTGGTACGAAAAAGGTCCAAAAATGGCTGGTGGCAACTATATTTATAGCGATAAAGTTGTGA TTTTAGTGCATATAGTCGCTAATCTCTTTAGAATTGGCTTAAGACAAACGGTAGGGTTTATAGAAGGGTATTTGCAGCAA ATAGGAAAAAATTTGCAGATTATCAGCTATTCACAAGCTTCAAGGAGGTTTAGAAAACTCAATATTAAGATCAGTGACTG TAGAGTTAACAAAAATGATACGGAAGGTATTGAAATTGCCATAGATAGTACAAGTATCAGATAA
Upstream 100 bases:
>100_bases CGCCGGTCTACTCTCCTTGTTGCATCACTCAAGTAAAAAGAGCTAGCAGTTACTGACAAAATTCACTATAAGACAAGCAT TTAACCTACGAAAGAAAAAT
Downstream 100 bases:
>100_bases TACCCCTGGTCACAGTAAGGAAAATAGCGAAGTATCGCAGTTATAAACAGGTAAGAAAGCTGCATGTAATGCTGGAGATA GGTAGCAAAAAAGTCATAGC
Product: Putative transposase (fragment)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSQKMRVSNCHEYNKFLQERGNIFHFINEAIENWYEKGPKMAGGNYIYSDKVVILVHIVANLFRIGLRQTVGFIEGYLQQ IGKNLQIISYSQASRRFRKLNIKISDCRVNKNDTEGIEIAIDSTSIR
Sequences:
>Translated_127_residues MSQKMRVSNCHEYNKFLQERGNIFHFINEAIENWYEKGPKMAGGNYIYSDKVVILVHIVANLFRIGLRQTVGFIEGYLQQ IGKNLQIISYSQASRRFRKLNIKISDCRVNKNDTEGIEIAIDSTSIR >Mature_126_residues SQKMRVSNCHEYNKFLQERGNIFHFINEAIENWYEKGPKMAGGNYIYSDKVVILVHIVANLFRIGLRQTVGFIEGYLQQI GKNLQIISYSQASRRFRKLNIKISDCRVNKNDTEGIEIAIDSTSIR
Specific function: Required for transposition of transposon Tn903 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 14745; Mature: 14614
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKMRVSNCHEYNKFLQERGNIFHFINEAIENWYEKGPKMAGGNYIYSDKVVILVHIVA CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHH NLFRIGLRQTVGFIEGYLQQIGKNLQIISYSQASRRFRKLNIKISDCRVNKNDTEGIEIA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCEEEEEECCCCCCCCEEEE IDSTSIR EECCCCC >Mature Secondary Structure SQKMRVSNCHEYNKFLQERGNIFHFINEAIENWYEKGPKMAGGNYIYSDKVVILVHIVA CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHH NLFRIGLRQTVGFIEGYLQQIGKNLQIISYSQASRRFRKLNIKISDCRVNKNDTEGIEIA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCEEEEEECCCCCCCCEEEE IDSTSIR EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6270337; 6261245; 6271455 [H]