| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
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The map label for this gene is zur [H]
Identifier: 189499178
GI number: 189499178
Start: 192015
End: 192473
Strand: Direct
Name: zur [H]
Synonym: Cphamn1_0194
Alternate gene names: 189499178
Gene position: 192015-192473 (Clockwise)
Preceding gene: 189499177
Following gene: 189499179
Centisome position: 7.02
GC content: 51.2
Gene sequence:
>459_bases GTGGAAGAACATCTTGAAAAACTCAGGGCGTCAGGGCGTAAGGTTACGCCCCGAAGGAAAGCTATTATTCAGCTTTTTTT GCAGGAGCAGGGGGACTTGTCTCCCCAGGATGTGCAGGAGGCGCTCAGCGGCACAACCGGACAGTTCGGTTTGCCGGGAA TATACCGCAACCTTGAGATCCTGACGACATGCGGCATTCTTTTCAGGGTCGTCACCTACGGGGGAGAAAGGCGTTATGCG CTCTGCAAGGCCGGTCATGGAGAAGGACATCATCATCATATTGTCTGTATTGCATGCAGAAAGGTTGGTAAGGTTTCCGA CTGTCTCTACAAGGATGGAATGATGGTCGAAGGATTCAGGCTTGTCAGTCATATTGTACAGTTAAACGGTTTATGCGAAT CATGTGCCAGGGAAAAAAACGACCTGTCGGCTCTGCAGGAGCTACGGCAGCAGGGTTGA
Upstream 100 bases:
>100_bases TTCACTACAGCGGCGTTCCCTTTGCCTTGCATCTACAGCATGCTCAACAATCGCTCAATTCTTCCTATATTACCAAATGG AAATCATTTCTGTTTAGAGA
Downstream 100 bases:
>100_bases TTCTGCTGTTTTCACTTTGTTATTCATCACTTTTCGCTGCCGCCCCCTCAAGCGATGCTGTTACCGGAGCCGCAGAGAAC ATTCGTGTGGTAACGTCCAT
Product: Fur family ferric uptake regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MEEHLEKLRASGRKVTPRRKAIIQLFLQEQGDLSPQDVQEALSGTTGQFGLPGIYRNLEILTTCGILFRVVTYGGERRYA LCKAGHGEGHHHHIVCIACRKVGKVSDCLYKDGMMVEGFRLVSHIVQLNGLCESCAREKNDLSALQELRQQG
Sequences:
>Translated_152_residues MEEHLEKLRASGRKVTPRRKAIIQLFLQEQGDLSPQDVQEALSGTTGQFGLPGIYRNLEILTTCGILFRVVTYGGERRYA LCKAGHGEGHHHHIVCIACRKVGKVSDCLYKDGMMVEGFRLVSHIVQLNGLCESCAREKNDLSALQELRQQG >Mature_152_residues MEEHLEKLRASGRKVTPRRKAIIQLFLQEQGDLSPQDVQEALSGTTGQFGLPGIYRNLEILTTCGILFRVVTYGGERRYA LCKAGHGEGHHHHIVCIACRKVGKVSDCLYKDGMMVEGFRLVSHIVQLNGLCESCAREKNDLSALQELRQQG
Specific function: Required for the zinc-specific repression of two operons implicated in zinc uptake, yciC and ycdHIyceA. Also represses the expression of rpmE2, the gene for ribosomal protein L31B, which is expressed only after the end of exponential growth [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16963; Mature: 16963
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEHLEKLRASGRKVTPRRKAIIQLFLQEQGDLSPQDVQEALSGTTGQFGLPGIYRNLEI CHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHH LTTCGILFRVVTYGGERRYALCKAGHGEGHHHHIVCIACRKVGKVSDCLYKDGMMVEGFR HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEHHHHCHHHHHHHHCCCHHHHHH LVSHIVQLNGLCESCAREKNDLSALQELRQQG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MEEHLEKLRASGRKVTPRRKAIIQLFLQEQGDLSPQDVQEALSGTTGQFGLPGIYRNLEI CHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHH LTTCGILFRVVTYGGERRYALCKAGHGEGHHHHIVCIACRKVGKVSDCLYKDGMMVEGFR HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEHHHHCHHHHHHHHCCCHHHHHH LVSHIVQLNGLCESCAREKNDLSALQELRQQG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9811636 [H]