Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
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Accession | NC_010831 |
Length | 2,736,403 |
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The map label for this gene is 189499172
Identifier: 189499172
GI number: 189499172
Start: 182055
End: 182651
Strand: Reverse
Name: 189499172
Synonym: Cphamn1_0187
Alternate gene names: NA
Gene position: 182651-182055 (Counterclockwise)
Preceding gene: 189499173
Following gene: 189499171
Centisome position: 6.67
GC content: 45.73
Gene sequence:
>597_bases ATGAACGAAATCATTTACATCCTCATCAACGAAGCCATGCCTGGATATGTGAAGATCGGGCGAACAACTAACTTGGAACA GCGTATCCGCTCGCTTGATACAACCAGCGTGCCTTTGCCGTTTGAGTGTTTTTATGCTTGCACCGTCAGAGATGCGAATT TTGTAGAGAAGCAGTTGCACGATGCGTTTTTGGATTATCGCGTGCGTTCTAGTCGTGAATTTTTTGAATTGTCGCCAGAC AGAGTGGTGGCAGCTCTCAAATTGGCAGAGATTGAAAATGTGACGCCAAAGCGAGATTATGTAGAGAGCAAAGAAGATCA GCAAGCGCTCAATCAAGCGCGCACACGGCGCGCGGTCTTTAATTTCAGAATGGCGAATATCCCCGTTGGTGCTGAACTCT CCTATGTGCATGATGAGAATATCAAAGCAAAAGTCATTGATAATAAATTGATTGAGCTGAACGGTGAAGTGACGAGTCTC TCCGCTTCGGCGCAAAAACTACTTGGCTATCCCTATCAGGTTCAAGGTACAGTGTATTGGATGTTTGAGGGCGAAACACT AGACGAACGCCGTCGCCGTTTAGAATCTGAAGAATAA
Upstream 100 bases:
>100_bases AGCGTGTGCTTGTGGATGGAAATAAAAAGTTGATTGAAATATACGAACAAAAAACCAAGGATACAATCGCCAAACTTTGG AAAGAATAATCTATAAAATT
Downstream 100 bases:
>100_bases ATATGTATGAAGATGCTCAAGAAATTTTTGGCTATTTACCCATTCGCCGAGATACATCGGAAAACGATTATATAAATCAT CTCTGGCAGTCCTTTTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MNEIIYILINEAMPGYVKIGRTTNLEQRIRSLDTTSVPLPFECFYACTVRDANFVEKQLHDAFLDYRVRSSREFFELSPD RVVAALKLAEIENVTPKRDYVESKEDQQALNQARTRRAVFNFRMANIPVGAELSYVHDENIKAKVIDNKLIELNGEVTSL SASAQKLLGYPYQVQGTVYWMFEGETLDERRRRLESEE
Sequences:
>Translated_198_residues MNEIIYILINEAMPGYVKIGRTTNLEQRIRSLDTTSVPLPFECFYACTVRDANFVEKQLHDAFLDYRVRSSREFFELSPD RVVAALKLAEIENVTPKRDYVESKEDQQALNQARTRRAVFNFRMANIPVGAELSYVHDENIKAKVIDNKLIELNGEVTSL SASAQKLLGYPYQVQGTVYWMFEGETLDERRRRLESEE >Mature_198_residues MNEIIYILINEAMPGYVKIGRTTNLEQRIRSLDTTSVPLPFECFYACTVRDANFVEKQLHDAFLDYRVRSSREFFELSPD RVVAALKLAEIENVTPKRDYVESKEDQQALNQARTRRAVFNFRMANIPVGAELSYVHDENIKAKVIDNKLIELNGEVTSL SASAQKLLGYPYQVQGTVYWMFEGETLDERRRRLESEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22936; Mature: 22936
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEIIYILINEAMPGYVKIGRTTNLEQRIRSLDTTSVPLPFECFYACTVRDANFVEKQLH CCCEEEEEECCCCCCEEEECCCCCHHHHHHHCCCCCCCCCHHHEEEEEECCCHHHHHHHH DAFLDYRVRSSREFFELSPDRVVAALKLAEIENVTPKRDYVESKEDQQALNQARTRRAVF HHHHHHHHCCCCHHEECCHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHH NFRMANIPVGAELSYVHDENIKAKVIDNKLIELNGEVTSLSASAQKLLGYPYQVQGTVYW HEEEECCCCCCEEEEEECCCCEEEEECCEEEEECCCEEEHHHHHHHHHCCCEEECEEEEE MFEGETLDERRRRLESEE EEECCCHHHHHHHCCCCC >Mature Secondary Structure MNEIIYILINEAMPGYVKIGRTTNLEQRIRSLDTTSVPLPFECFYACTVRDANFVEKQLH CCCEEEEEECCCCCCEEEECCCCCHHHHHHHCCCCCCCCCHHHEEEEEECCCHHHHHHHH DAFLDYRVRSSREFFELSPDRVVAALKLAEIENVTPKRDYVESKEDQQALNQARTRRAVF HHHHHHHHCCCCHHEECCHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHH NFRMANIPVGAELSYVHDENIKAKVIDNKLIELNGEVTSLSASAQKLLGYPYQVQGTVYW HEEEECCCCCCEEEEEECCCCEEEEECCEEEEECCCEEEHHHHHHHHHCCCEEECEEEEE MFEGETLDERRRRLESEE EEECCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA