Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
---|---|
Accession | NC_010831 |
Length | 2,736,403 |
Click here to switch to the map view.
The map label for this gene is 189499171
Identifier: 189499171
GI number: 189499171
Start: 181291
End: 182052
Strand: Reverse
Name: 189499171
Synonym: Cphamn1_0186
Alternate gene names: NA
Gene position: 182052-181291 (Counterclockwise)
Preceding gene: 189499172
Following gene: 189499170
Centisome position: 6.65
GC content: 40.68
Gene sequence:
>762_bases ATGTATGAAGATGCTCAAGAAATTTTTGGCTATTTACCCATTCGCCGAGATACATCGGAAAACGATTATATAAATCATCT CTGGCAGTCCTTTTTACTACTCGAAAAGGCTGATAGACGTGGGGACAAAGACGAAAATGGCTTCGCCGTTGAAGATAAAA GTCTTTTCATGGGACGATCATTTGCTGTGATGCCGTTTCATTTACTCTTTATGTTGGCGATTCAGTATAAAGTTTTGCGT ATATACAAAGAGCAAAAAGAAAAATATGAGTTGGCACTGACGACCAAAAATCCCCGCAACGGAGAAAAAGATATTTTAGC TCCAGAATCTCCACTTGCCATTGCTTTTTTAGGGGAGAGCGAGATTGTGGATTTTTTGAAGATTGCAGGATTGTCGGCGG ACGACGCGCGTAGTATCAAAAAATCGATTGTTCGTTATCGTAATGACAAAATTGCGCACGCCAAGGGCTACATCGAGCAG GATATAGAAACAAAAATTACAGAATACTTCGGCTGGTTGGAAACACTGCAAACAGTCTATCGCCAGATGAACCAAAATGT TGCCGATCTGTGGCTCTCTGAAGTTGAGATTGGCGATGACATGGAGCAATTTTTGGAAATTCATTTTTTGGATTCGTGTT TTAGTCCACGAGATTTTGGTGATATTATCGGAACTCTACTCGAAGCCGAGCAACTCGATTTTGATCAGTGGTCGCAAGTC GTGAATAAAGGTTTGGAAATGGTGAGATTGATGAAGAAATGA
Upstream 100 bases:
>100_bases TACTTGGCTATCCCTATCAGGTTCAAGGTACAGTGTATTGGATGTTTGAGGGCGAAACACTAGACGAACGCCGTCGCCGT TTAGAATCTGAAGAATAAAT
Downstream 100 bases:
>100_bases AAAAGAGTATAATTGAGAGTGAGAAAGACAAAGAAATTTTGGAGTTGTTAAAATAAAAGGTGGCGCGCCAATGAAATTGG TACAGCCTCAAACCCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MYEDAQEIFGYLPIRRDTSENDYINHLWQSFLLLEKADRRGDKDENGFAVEDKSLFMGRSFAVMPFHLLFMLAIQYKVLR IYKEQKEKYELALTTKNPRNGEKDILAPESPLAIAFLGESEIVDFLKIAGLSADDARSIKKSIVRYRNDKIAHAKGYIEQ DIETKITEYFGWLETLQTVYRQMNQNVADLWLSEVEIGDDMEQFLEIHFLDSCFSPRDFGDIIGTLLEAEQLDFDQWSQV VNKGLEMVRLMKK
Sequences:
>Translated_253_residues MYEDAQEIFGYLPIRRDTSENDYINHLWQSFLLLEKADRRGDKDENGFAVEDKSLFMGRSFAVMPFHLLFMLAIQYKVLR IYKEQKEKYELALTTKNPRNGEKDILAPESPLAIAFLGESEIVDFLKIAGLSADDARSIKKSIVRYRNDKIAHAKGYIEQ DIETKITEYFGWLETLQTVYRQMNQNVADLWLSEVEIGDDMEQFLEIHFLDSCFSPRDFGDIIGTLLEAEQLDFDQWSQV VNKGLEMVRLMKK >Mature_253_residues MYEDAQEIFGYLPIRRDTSENDYINHLWQSFLLLEKADRRGDKDENGFAVEDKSLFMGRSFAVMPFHLLFMLAIQYKVLR IYKEQKEKYELALTTKNPRNGEKDILAPESPLAIAFLGESEIVDFLKIAGLSADDARSIKKSIVRYRNDKIAHAKGYIEQ DIETKITEYFGWLETLQTVYRQMNQNVADLWLSEVEIGDDMEQFLEIHFLDSCFSPRDFGDIIGTLLEAEQLDFDQWSQV VNKGLEMVRLMKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29533; Mature: 29533
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEDAQEIFGYLPIRRDTSENDYINHLWQSFLLLEKADRRGDKDENGFAVEDKSLFMGRS CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHCCC FAVMPFHLLFMLAIQYKVLRIYKEQKEKYELALTTKNPRNGEKDILAPESPLAIAFLGES HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEEEEECCCH EIVDFLKIAGLSADDARSIKKSIVRYRNDKIAHAKGYIEQDIETKITEYFGWLETLQTVY HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQMNQNVADLWLSEVEIGDDMEQFLEIHFLDSCFSPRDFGDIIGTLLEAEQLDFDQWSQV HHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHH VNKGLEMVRLMKK HHHHHHHHHHHCC >Mature Secondary Structure MYEDAQEIFGYLPIRRDTSENDYINHLWQSFLLLEKADRRGDKDENGFAVEDKSLFMGRS CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHCCC FAVMPFHLLFMLAIQYKVLRIYKEQKEKYELALTTKNPRNGEKDILAPESPLAIAFLGES HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEEEEECCCH EIVDFLKIAGLSADDARSIKKSIVRYRNDKIAHAKGYIEQDIETKITEYFGWLETLQTVY HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQMNQNVADLWLSEVEIGDDMEQFLEIHFLDSCFSPRDFGDIIGTLLEAEQLDFDQWSQV HHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHH VNKGLEMVRLMKK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA