Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
---|---|
Accession | NC_010831 |
Length | 2,736,403 |
Click here to switch to the map view.
The map label for this gene is 189499170
Identifier: 189499170
GI number: 189499170
Start: 180035
End: 180559
Strand: Reverse
Name: 189499170
Synonym: Cphamn1_0185
Alternate gene names: NA
Gene position: 180559-180035 (Counterclockwise)
Preceding gene: 189499171
Following gene: 189499169
Centisome position: 6.6
GC content: 47.81
Gene sequence:
>525_bases ATGGTTACAGAGAAGGGAGTGATCGGGATCAGGATTGCAGGCTTAAGCGAAGGGCTGCACGAGTATGATTTCGCCTGCAA AGCATCGGATTTCAAAAATCCTGAACTTGCCGAGCCGGCCTTTTGTAACGAGATCCGGGTGCGAATTGCAGCAGTCAGGA CCGAAAGGGAAATGACTGTCGATATCGAAACGAAAACCGTTGCGGAATTCAGTTGCGACAGATGCCTCGAGCCGCTGAAA AAAGAACTGACAGGAAAGTACCGGATTTTGTTTGCTTTCAGTGACACCGGCGCACTTTCTGAAAAGAGTGATGAGAACTA TCGTGCGCTCGACAGAAATGCCGTCACTGTAGACCTGACTGAAGATGTGCGTGAAACATTGCTTCTGTCAAAACCTATGA AGGTTGTCTGCGCTGACAAGTCCGCTTGTACCCTGTATCAGGAAAACTCGCCTCTGAATGCAGACCATGAAAGTGAGACA GCAAGTCCATGGAAAGAATCACTTGAAAAATTGAAGGGCAAGTAA
Upstream 100 bases:
>100_bases GTGAAAATCGAAAAAAAAGCAAGAAGACTCCCGTTTTTTTCTTTTTACAGGTAAGATTTTGTAAATTCTTGTTCTTTTAT GTATAAAGGGCTCAGTGAAA
Downstream 100 bases:
>100_bases TAAAAAGAAGTTTATAATCAATATCTACTGTTATGGCCACACCTAAAGCGAAAGTATCAAAGTCAAGAAGGGATAAAAGA CGTGCACAGTTCACTGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MVTEKGVIGIRIAGLSEGLHEYDFACKASDFKNPELAEPAFCNEIRVRIAAVRTEREMTVDIETKTVAEFSCDRCLEPLK KELTGKYRILFAFSDTGALSEKSDENYRALDRNAVTVDLTEDVRETLLLSKPMKVVCADKSACTLYQENSPLNADHESET ASPWKESLEKLKGK
Sequences:
>Translated_174_residues MVTEKGVIGIRIAGLSEGLHEYDFACKASDFKNPELAEPAFCNEIRVRIAAVRTEREMTVDIETKTVAEFSCDRCLEPLK KELTGKYRILFAFSDTGALSEKSDENYRALDRNAVTVDLTEDVRETLLLSKPMKVVCADKSACTLYQENSPLNADHESET ASPWKESLEKLKGK >Mature_174_residues MVTEKGVIGIRIAGLSEGLHEYDFACKASDFKNPELAEPAFCNEIRVRIAAVRTEREMTVDIETKTVAEFSCDRCLEPLK KELTGKYRILFAFSDTGALSEKSDENYRALDRNAVTVDLTEDVRETLLLSKPMKVVCADKSACTLYQENSPLNADHESET ASPWKESLEKLKGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19485; Mature: 19485
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTEKGVIGIRIAGLSEGLHEYDFACKASDFKNPELAEPAFCNEIRVRIAAVRTEREMTV CCCCCCEEEEEEECCCCCHHHHCCEECCCCCCCCCCCCCHHHHHHHEEEEEEECCCEEEE DIETKTVAEFSCDRCLEPLKKELTGKYRILFAFSDTGALSEKSDENYRALDRNAVTVDLT EECHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCEEEEEH EDVRETLLLSKPMKVVCADKSACTLYQENSPLNADHESETASPWKESLEKLKGK HHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MVTEKGVIGIRIAGLSEGLHEYDFACKASDFKNPELAEPAFCNEIRVRIAAVRTEREMTV CCCCCCEEEEEEECCCCCHHHHCCEECCCCCCCCCCCCCHHHHHHHEEEEEEECCCEEEE DIETKTVAEFSCDRCLEPLKKELTGKYRILFAFSDTGALSEKSDENYRALDRNAVTVDLT EECHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEECCCCCEEEEEH EDVRETLLLSKPMKVVCADKSACTLYQENSPLNADHESETASPWKESLEKLKGK HHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA