| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
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The map label for this gene is 189499112
Identifier: 189499112
GI number: 189499112
Start: 112854
End: 114128
Strand: Direct
Name: 189499112
Synonym: Cphamn1_0121
Alternate gene names: NA
Gene position: 112854-114128 (Clockwise)
Preceding gene: 189499111
Following gene: 189499113
Centisome position: 4.12
GC content: 53.41
Gene sequence:
>1275_bases ATGCCTGAAATCCGTCCTTTCAAAGGTTTGCGGTACGATCCTGAAACCGCAGGTGACATGGGGAGCATCATCTGCCCGCC CTATGATATTATACCTCCGTCGATGCAGCAGGAACTGTACGACAGTTCAGCCTACAATGCGGTTCGGCTTGAGTTGCCGA AGGAAGACGATCCGTATGGTGCCGCTGCGGAACGGCTGGCGCAGTGGATGCGGGAGGGGGCTCTGATGCAGGACGACGAA CCTGCGCTCTATCCCTATTTCCAGACCTATACTGACCCTGAAGGAAATACCTATACCCGGAAAGGCTTTTTCTGCGCCTT GCGTCTGCACGAGTTCAGCGAAAAAAAGGTGCTGCCTCATGAGCGGACACTATCGGGGCCGAAAAAAGATCGCCTGAACC TGTTCAAGCGGACACAGACAAATATCAGCAGTATTTTCGGTTTGTACGCCGATGACCAGATGCAGGCGGACAAGCTTATC GAGGAATATGCAGTATCGCATGAACCGGTAGTCGATGCCGCATTCCAGGGGGTGCGGAACCGGCTCTGGAAGATTACCGA TCCTGATATTACCGGTAAGGTGCAGCAGGTTCTGCTGGAGCGTCAGGTCTATATAGCCGACGGTCATCATCGCTACGAGA CAGGAGTGAACTATCGTAATCTTCGGGCGGAGGAAAATCCTTCGCACACCGGAGAGGAACCATACAATTTCATCCTTGTC TATCTCGCCAACATCTTCGACAGAGGCTTGATCATTTTTCCGCTGCACAGGATGGTACACAGCCTTGATACCTTCAATGC CGATGCGCTCTTCGATGCGCTTGGCGCAAACTTTTCGATAACCCCTCTCAGCGGCAGGGACGAACTGAAGCGCTACCTCG ATGGAGAAACGTCAAACCATGCCTATGGTGTCGTGACTTCTACGGGGGTCTGGGGCATCAGGCTGAAAACTCCTCCGGAA ACCCTGCTCGGTGACGCTGTTCCCGCTCCTCTGCTGCAACTCAGCGTGGTCGTGCTGCACGAACTGATTCTGCAGCGTGT GCTTGGCATTACGCCGGAGGCGATGCGCAGCCAGACCAATCTTGTGTATATCGAGGACGACCGTGAGGTTTTCGAGAACG TTTCCAACGGCAAGATGCAGGTCGGGTTTGTGGTTAAACCGACCACGGTAGAGCAGGTTCGGGATATTTCGCAGGCCGGC GAGGTTATGCCGCAGAAGTCCACGTACTTTTATCCGAAGATTATGACAGGTTTAGTCATGCATAGGCTTAAGTAA
Upstream 100 bases:
>100_bases TTTAGAGGAAATAACCCTGTGTCGGGTCATATGCCCGGCTTTTTTATCTTGAAAAATCAGGAAGAAAGGCGTTCTTCACC CTGTAACCACCAATGCTATT
Downstream 100 bases:
>100_bases AGGCAAAAGGAAAAAGTCAAAGGTCAAAAGGCAAAAGGTAAAAAGGTGCCTTCGGCACGGAAATGTTAAGCCATGAGGGT TGCTATAACCTTGTTACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MPEIRPFKGLRYDPETAGDMGSIICPPYDIIPPSMQQELYDSSAYNAVRLELPKEDDPYGAAAERLAQWMREGALMQDDE PALYPYFQTYTDPEGNTYTRKGFFCALRLHEFSEKKVLPHERTLSGPKKDRLNLFKRTQTNISSIFGLYADDQMQADKLI EEYAVSHEPVVDAAFQGVRNRLWKITDPDITGKVQQVLLERQVYIADGHHRYETGVNYRNLRAEENPSHTGEEPYNFILV YLANIFDRGLIIFPLHRMVHSLDTFNADALFDALGANFSITPLSGRDELKRYLDGETSNHAYGVVTSTGVWGIRLKTPPE TLLGDAVPAPLLQLSVVVLHELILQRVLGITPEAMRSQTNLVYIEDDREVFENVSNGKMQVGFVVKPTTVEQVRDISQAG EVMPQKSTYFYPKIMTGLVMHRLK
Sequences:
>Translated_424_residues MPEIRPFKGLRYDPETAGDMGSIICPPYDIIPPSMQQELYDSSAYNAVRLELPKEDDPYGAAAERLAQWMREGALMQDDE PALYPYFQTYTDPEGNTYTRKGFFCALRLHEFSEKKVLPHERTLSGPKKDRLNLFKRTQTNISSIFGLYADDQMQADKLI EEYAVSHEPVVDAAFQGVRNRLWKITDPDITGKVQQVLLERQVYIADGHHRYETGVNYRNLRAEENPSHTGEEPYNFILV YLANIFDRGLIIFPLHRMVHSLDTFNADALFDALGANFSITPLSGRDELKRYLDGETSNHAYGVVTSTGVWGIRLKTPPE TLLGDAVPAPLLQLSVVVLHELILQRVLGITPEAMRSQTNLVYIEDDREVFENVSNGKMQVGFVVKPTTVEQVRDISQAG EVMPQKSTYFYPKIMTGLVMHRLK >Mature_423_residues PEIRPFKGLRYDPETAGDMGSIICPPYDIIPPSMQQELYDSSAYNAVRLELPKEDDPYGAAAERLAQWMREGALMQDDEP ALYPYFQTYTDPEGNTYTRKGFFCALRLHEFSEKKVLPHERTLSGPKKDRLNLFKRTQTNISSIFGLYADDQMQADKLIE EYAVSHEPVVDAAFQGVRNRLWKITDPDITGKVQQVLLERQVYIADGHHRYETGVNYRNLRAEENPSHTGEEPYNFILVY LANIFDRGLIIFPLHRMVHSLDTFNADALFDALGANFSITPLSGRDELKRYLDGETSNHAYGVVTSTGVWGIRLKTPPET LLGDAVPAPLLQLSVVVLHELILQRVLGITPEAMRSQTNLVYIEDDREVFENVSNGKMQVGFVVKPTTVEQVRDISQAGE VMPQKSTYFYPKIMTGLVMHRLK
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48197; Mature: 48066
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIRPFKGLRYDPETAGDMGSIICPPYDIIPPSMQQELYDSSAYNAVRLELPKEDDPYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCC AAAERLAQWMREGALMQDDEPALYPYFQTYTDPEGNTYTRKGFFCALRLHEFSEKKVLPH HHHHHHHHHHHCCCCCCCCCCCCCCHHHCEECCCCCCEECCCEEEEEEEHHCCCCCCCCC ERTLSGPKKDRLNLFKRTQTNISSIFGLYADDQMQADKLIEEYAVSHEPVVDAAFQGVRN HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH RLWKITDPDITGKVQQVLLERQVYIADGHHRYETGVNYRNLRAEENPSHTGEEPYNFILV HCEECCCCCCHHHHHHHHHHHHEEEECCCCHHHCCCCHHCCCCCCCCCCCCCCCHHHHHH YLANIFDRGLIIFPLHRMVHSLDTFNADALFDALGANFSITPLSGRDELKRYLDGETSNH HHHHHHHCCEEEEHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC AYGVVTSTGVWGIRLKTPPETLLGDAVPAPLLQLSVVVLHELILQRVLGITPEAMRSQTN EEEEEEECCEEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC LVYIEDDREVFENVSNGKMQVGFVVKPTTVEQVRDISQAGEVMPQKSTYFYPKIMTGLVM EEEEECCHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHH HRLK HHCC >Mature Secondary Structure PEIRPFKGLRYDPETAGDMGSIICPPYDIIPPSMQQELYDSSAYNAVRLELPKEDDPYG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCC AAAERLAQWMREGALMQDDEPALYPYFQTYTDPEGNTYTRKGFFCALRLHEFSEKKVLPH HHHHHHHHHHHCCCCCCCCCCCCCCHHHCEECCCCCCEECCCEEEEEEEHHCCCCCCCCC ERTLSGPKKDRLNLFKRTQTNISSIFGLYADDQMQADKLIEEYAVSHEPVVDAAFQGVRN HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH RLWKITDPDITGKVQQVLLERQVYIADGHHRYETGVNYRNLRAEENPSHTGEEPYNFILV HCEECCCCCCHHHHHHHHHHHHEEEECCCCHHHCCCCHHCCCCCCCCCCCCCCCHHHHHH YLANIFDRGLIIFPLHRMVHSLDTFNADALFDALGANFSITPLSGRDELKRYLDGETSNH HHHHHHHCCEEEEHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC AYGVVTSTGVWGIRLKTPPETLLGDAVPAPLLQLSVVVLHELILQRVLGITPEAMRSQTN EEEEEEECCEEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC LVYIEDDREVFENVSNGKMQVGFVVKPTTVEQVRDISQAGEVMPQKSTYFYPKIMTGLVM EEEEECCHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHH HRLK HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA