| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
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The map label for this gene is 189499111
Identifier: 189499111
GI number: 189499111
Start: 112153
End: 112728
Strand: Direct
Name: 189499111
Synonym: Cphamn1_0120
Alternate gene names: NA
Gene position: 112153-112728 (Clockwise)
Preceding gene: 189499110
Following gene: 189499112
Centisome position: 4.1
GC content: 39.41
Gene sequence:
>576_bases GTGAAAATAACTTTTGATATACCATGGACGCGCTATGCGCTTATTGCTGAATTAGCTAAACGTCTGGATGGTGTTAATCC TCAGTTTGGCAAAACAGTACTTGAAAAACTGGTTTTTTTCCTCCAAGAAATTTACGGGATCAAATGCGGTTACGATTTTG AGCTTTACTCCTATGGCCCATTTGATTCTCAATTGCTTGGTGACCTTGATCTGGTTGAGCATTGGGGAGGCGTTACTGTT TTAAGGGTTAACAATAGCTTTGGGGGATACAGAATTCAGCCGTCAGAAAAGGTTGATTCTATTGTAGGCAAAGCCAAAGA GTTTATTGAAGACCAGAAAACGGAAAAAGCGCTTGATGATCTTGTTTCAAATTATGGGGCTATGACCGCTAGAGACCTTG AACTTCGGGCAACTACAGTTTATGTCGAGCGCGGCCTTCGTAAAAAAGGTGAGTATAGATCTAAAGAAAAAATCTGTTCG TTAGTTAGCCAAATCAAACCGAAATTTGATTTTCAAGAAATTGAACAGGCGGTTTTGGAGCTAAAAAAAAGGAGCCATAT AGAATTTACTGATTAG
Upstream 100 bases:
>100_bases TTACTACAGTTAATCGTACCCGGATTTATGTGCCTATGGGTAAAAAAGATGAGGCTCGTGAGACGGTGGCAAAAAAAAGA AAAGAACGGGAGGAAAAACG
Downstream 100 bases:
>100_bases TATAAAACGATTTAGCAAGGTTTTATTTAGAGGAAATAACCCTGTGTCGGGTCATATGCCCGGCTTTTTTATCTTGAAAA ATCAGGAAGAAAGGCGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKITFDIPWTRYALIAELAKRLDGVNPQFGKTVLEKLVFFLQEIYGIKCGYDFELYSYGPFDSQLLGDLDLVEHWGGVTV LRVNNSFGGYRIQPSEKVDSIVGKAKEFIEDQKTEKALDDLVSNYGAMTARDLELRATTVYVERGLRKKGEYRSKEKICS LVSQIKPKFDFQEIEQAVLELKKRSHIEFTD
Sequences:
>Translated_191_residues MKITFDIPWTRYALIAELAKRLDGVNPQFGKTVLEKLVFFLQEIYGIKCGYDFELYSYGPFDSQLLGDLDLVEHWGGVTV LRVNNSFGGYRIQPSEKVDSIVGKAKEFIEDQKTEKALDDLVSNYGAMTARDLELRATTVYVERGLRKKGEYRSKEKICS LVSQIKPKFDFQEIEQAVLELKKRSHIEFTD >Mature_191_residues MKITFDIPWTRYALIAELAKRLDGVNPQFGKTVLEKLVFFLQEIYGIKCGYDFELYSYGPFDSQLLGDLDLVEHWGGVTV LRVNNSFGGYRIQPSEKVDSIVGKAKEFIEDQKTEKALDDLVSNYGAMTARDLELRATTVYVERGLRKKGEYRSKEKICS LVSQIKPKFDFQEIEQAVLELKKRSHIEFTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21976; Mature: 21976
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITFDIPWTRYALIAELAKRLDGVNPQFGKTVLEKLVFFLQEIYGIKCGYDFELYSYGP CEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC FDSQLLGDLDLVEHWGGVTVLRVNNSFGGYRIQPSEKVDSIVGKAKEFIEDQKTEKALDD CCHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH LVSNYGAMTARDLELRATTVYVERGLRKKGEYRSKEKICSLVSQIKPKFDFQEIEQAVLE HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH LKKRSHIEFTD HHHHCCCCCCC >Mature Secondary Structure MKITFDIPWTRYALIAELAKRLDGVNPQFGKTVLEKLVFFLQEIYGIKCGYDFELYSYGP CEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC FDSQLLGDLDLVEHWGGVTVLRVNNSFGGYRIQPSEKVDSIVGKAKEFIEDQKTEKALDD CCHHHHHHHHHHHHCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH LVSNYGAMTARDLELRATTVYVERGLRKKGEYRSKEKICSLVSQIKPKFDFQEIEQAVLE HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH LKKRSHIEFTD HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA