Click here to switch to the map view.

The map label for this gene is 189499042

Identifier: 189499042

GI number: 189499042

Start: 45860

End: 46306

Strand: Direct

Name: 189499042

Synonym: Cphamn1_0042

Alternate gene names: NA

Gene position: 45860-46306 (Clockwise)

Preceding gene: 189499041

Following gene: 189499045

Centisome position: 1.68

GC content: 45.86

Gene sequence:

>447_bases
ATGGCTAAAGAGTGGATCCTCAACAGCGCGATGAACCGTTTCCAGTTGAATTTCAAAAGGAATGTCGGCCCAACATCCGA
ATCCATCAGGAAATGTGCACCCAAAACGCTTGATGAGTGGCGGAAGTACTACTTTGCAAACGTCAAGCCTGAAGAGCATA
TCGTTGAACTCGGGAAAAGGCTGTATGTAAAAATCACCGAAGTGATCCAGTCTGAGGTTGCCGAGATAACGGAAGAGGAC
TGCATAAAGTATATGAAGCAGCTTGTCATCGATCGAACGTTCTTGGGCTACGAAACGGAAATTCAGACGGTCTACGGTCA
GTTGGAGGGGCTTCTCGATGTCAAGATACAGCCTGCTCCTGATAAGTGGGACAGGTTGTACAATGTTGATTTTTTTGTCA
AAGTTGGTGATAGCTATATCGGGCTTCAGATCAAGCCAATTTCCTGA

Upstream 100 bases:

>100_bases
TTCGTCAACGCTCATTTGATTCGTAGTGGATTCGTCGGCATTGAAATGGACTTCGACTATAAGTACAAAGGCAAGTTTTT
AACTCTATTGGAAAAAGTCA

Downstream 100 bases:

>100_bases
CTTGTGCCAATTAGTGCCGAAACTCAGAGCTCAAGAAATCGTTGAATCTTGTTGGTAAATTCGCTTGTGCCCATCTGCAT
GACACAAACCTCACCGGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MAKEWILNSAMNRFQLNFKRNVGPTSESIRKCAPKTLDEWRKYYFANVKPEEHIVELGKRLYVKITEVIQSEVAEITEED
CIKYMKQLVIDRTFLGYETEIQTVYGQLEGLLDVKIQPAPDKWDRLYNVDFFVKVGDSYIGLQIKPIS

Sequences:

>Translated_148_residues
MAKEWILNSAMNRFQLNFKRNVGPTSESIRKCAPKTLDEWRKYYFANVKPEEHIVELGKRLYVKITEVIQSEVAEITEED
CIKYMKQLVIDRTFLGYETEIQTVYGQLEGLLDVKIQPAPDKWDRLYNVDFFVKVGDSYIGLQIKPIS
>Mature_147_residues
AKEWILNSAMNRFQLNFKRNVGPTSESIRKCAPKTLDEWRKYYFANVKPEEHIVELGKRLYVKITEVIQSEVAEITEEDC
IKYMKQLVIDRTFLGYETEIQTVYGQLEGLLDVKIQPAPDKWDRLYNVDFFVKVGDSYIGLQIKPIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17357; Mature: 17226

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEWILNSAMNRFQLNFKRNVGPTSESIRKCAPKTLDEWRKYYFANVKPEEHIVELGKR
CCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH
LYVKITEVIQSEVAEITEEDCIKYMKQLVIDRTFLGYETEIQTVYGQLEGLLDVKIQPAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCC
DKWDRLYNVDFFVKVGDSYIGLQIKPIS
CHHHHHCCCEEEEEECCCEEEEEEEECC
>Mature Secondary Structure 
AKEWILNSAMNRFQLNFKRNVGPTSESIRKCAPKTLDEWRKYYFANVKPEEHIVELGKR
CHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHH
LYVKITEVIQSEVAEITEEDCIKYMKQLVIDRTFLGYETEIQTVYGQLEGLLDVKIQPAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCC
DKWDRLYNVDFFVKVGDSYIGLQIKPIS
CHHHHHCCCEEEEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA