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The map label for this gene is fccB [H]

Identifier: 189499010

GI number: 189499010

Start: 12507

End: 13799

Strand: Direct

Name: fccB [H]

Synonym: Cphamn1_0010

Alternate gene names: 189499010

Gene position: 12507-13799 (Clockwise)

Preceding gene: 189499009

Following gene: 189499011

Centisome position: 0.46

GC content: 49.96

Gene sequence:

>1293_bases
ATGAGTCAGAAATTTACACGTCGAGATTTCAGTAAACTCGTTATGGCCGGAGCAGCCGGTTCTACACTTAGCCTGTTCGG
CGGTGCAAAGCCGCTGTTTGCAAACCAGAAGCACGTGGTTGTTGTTGGCGGAGGATTTGGTGGTGCGTCTGCGGCGAAAT
ATATCAAAAAACTTGATTCATCCATTGCAGTTACCCTGGTTGAGCCCTTGACGACATATTATACCTGTCCTTTCAGTAAC
TGGGTGTTAGGTGGCTTAAAAGAGATGAAAGATATCGCTCAGACCTATGACGTCTTGAAAAACACGCATGGTGTAGAGGT
GATTCATGACACGGCTACGGAAATCGATGCTGCCAATCACTCTGTGACGCTTAAAGGCGGTAAGGTGCTGAAGTATGACC
GCCTCGTGGTCTCTCCAGGTATTGATTTTGATTATGATGCTATTGAAGGGTACTCCGAGGAGGTTGCCAACACGGTGATG
CCTCATGCATACAAGGCGGGACCGCAGACCGAACTCCTGGCCAAGCAGCTGCAGGAGATGAAGGACGGGGATAATGTTAT
TATCTGTCCTCCGGGTAACCCGTTTCGGTGCCCTCCCGGACCGTATGAAAGAGCAAGTCTTGTTGCCAACTATCTGAAAA
AGAACAAGCCGAATTCCAAGGTTATTATTCTTGACACCAAAGAGAAATTTTCCAAACAGGGCCTCTTTACCAAAGGATGG
GAAAGGCTTTACGGTGATCTTATCGAGTGGCGTGCCGGCTCGGCGGGAGGCAAAATTGTTTCAGTTGACCCTGCAAATAT
GACGGTTCAGACTGCTAACGGACCGGTGAAAGGCGGAGTGATCAACGTTATTCCACCTCAGAAAGTAGGGAAAATCGCTC
TTGATGCAGGATTGACCAATGAGAGCGGCTGGTGCCCGGTCAACCCGATTACCTTTGAGTCTACCATCCATCCGGGTATT
CATGTCATCGGTGACGCATCTATTGCCGGAGCGATGCCGAAATCAGGTTTTGCCGCAAGTAGTCAGGGCAAGGTCACTGC
GGCAAGTATTGTCCGGCTGATGCAGGGTATGGTGCCGGCTCCGCCGTCTCTTGTCAATACCTGTTACAGTCTTGTCGGAC
CGGGCTACGGTATTTCTGTTGCTGCTGTCTACAAGCTCACCAGTGATGGTATTGTCAGCATAAAAGGTGCAGGAGGTCTC
ACTCCTATGGACGCTGACGATGATCAGCTGAGTGAAGAAGCGACCTACGCACGTGGCTGGTATAACAACATAGCGCAGGA
TATCTGGGGATAA

Upstream 100 bases:

>100_bases
GACGTCATGCGAAAGGGTATACCGATGAGGAGATCGTACTCATTGCTGAATACTTTGGCAGCCTAAGTCAACAAAATTCT
AAATAAGCGGGGGAATAAAC

Downstream 100 bases:

>100_bases
GCTGTGATGTTTACCTGAATACATGAAGGCCCGGCATTTGCCGGGCTTTTCTGTTACTCGGCCTTCAGCACGGTTGATGG
TCGCCTACGACTCCTTTTGA

Product: Flavocytochrome c sulfide dehydrogenase

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSQKFTRRDFSKLVMAGAAGSTLSLFGGAKPLFANQKHVVVVGGGFGGASAAKYIKKLDSSIAVTLVEPLTTYYTCPFSN
WVLGGLKEMKDIAQTYDVLKNTHGVEVIHDTATEIDAANHSVTLKGGKVLKYDRLVVSPGIDFDYDAIEGYSEEVANTVM
PHAYKAGPQTELLAKQLQEMKDGDNVIICPPGNPFRCPPGPYERASLVANYLKKNKPNSKVIILDTKEKFSKQGLFTKGW
ERLYGDLIEWRAGSAGGKIVSVDPANMTVQTANGPVKGGVINVIPPQKVGKIALDAGLTNESGWCPVNPITFESTIHPGI
HVIGDASIAGAMPKSGFAASSQGKVTAASIVRLMQGMVPAPPSLVNTCYSLVGPGYGISVAAVYKLTSDGIVSIKGAGGL
TPMDADDDQLSEEATYARGWYNNIAQDIWG

Sequences:

>Translated_430_residues
MSQKFTRRDFSKLVMAGAAGSTLSLFGGAKPLFANQKHVVVVGGGFGGASAAKYIKKLDSSIAVTLVEPLTTYYTCPFSN
WVLGGLKEMKDIAQTYDVLKNTHGVEVIHDTATEIDAANHSVTLKGGKVLKYDRLVVSPGIDFDYDAIEGYSEEVANTVM
PHAYKAGPQTELLAKQLQEMKDGDNVIICPPGNPFRCPPGPYERASLVANYLKKNKPNSKVIILDTKEKFSKQGLFTKGW
ERLYGDLIEWRAGSAGGKIVSVDPANMTVQTANGPVKGGVINVIPPQKVGKIALDAGLTNESGWCPVNPITFESTIHPGI
HVIGDASIAGAMPKSGFAASSQGKVTAASIVRLMQGMVPAPPSLVNTCYSLVGPGYGISVAAVYKLTSDGIVSIKGAGGL
TPMDADDDQLSEEATYARGWYNNIAQDIWG
>Mature_429_residues
SQKFTRRDFSKLVMAGAAGSTLSLFGGAKPLFANQKHVVVVGGGFGGASAAKYIKKLDSSIAVTLVEPLTTYYTCPFSNW
VLGGLKEMKDIAQTYDVLKNTHGVEVIHDTATEIDAANHSVTLKGGKVLKYDRLVVSPGIDFDYDAIEGYSEEVANTVMP
HAYKAGPQTELLAKQLQEMKDGDNVIICPPGNPFRCPPGPYERASLVANYLKKNKPNSKVIILDTKEKFSKQGLFTKGWE
RLYGDLIEWRAGSAGGKIVSVDPANMTVQTANGPVKGGVINVIPPQKVGKIALDAGLTNESGWCPVNPITFESTIHPGIH
VIGDASIAGAMPKSGFAASSQGKVTAASIVRLMQGMVPAPPSLVNTCYSLVGPGYGISVAAVYKLTSDGIVSIKGAGGLT
PMDADDDQLSEEATYARGWYNNIAQDIWG

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10864011, Length=403, Percent_Identity=24.8138957816377, Blast_Score=76, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 45661; Mature: 45529

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKFTRRDFSKLVMAGAAGSTLSLFGGAKPLFANQKHVVVVGGGFGGASAAKYIKKLDS
CCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCC
SIAVTLVEPLTTYYTCPFSNWVLGGLKEMKDIAQTYDVLKNTHGVEVIHDTATEIDAANH
CEEEEEEHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCCC
SVTLKGGKVLKYDRLVVSPGIDFDYDAIEGYSEEVANTVMPHAYKAGPQTELLAKQLQEM
EEEECCCEEEEECEEEECCCCCCCHHHHCCHHHHHHHHHCCCHHCCCCHHHHHHHHHHHH
KDGDNVIICPPGNPFRCPPGPYERASLVANYLKKNKPNSKVIILDTKEKFSKQGLFTKGW
HCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCCHHHH
ERLYGDLIEWRAGSAGGKIVSVDPANMTVQTANGPVKGGVINVIPPQKVGKIALDAGLTN
HHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCEEECCCCHHHCCEEEECCCCC
ESGWCPVNPITFESTIHPGIHVIGDASIAGAMPKSGFAASSQGKVTAASIVRLMQGMVPA
CCCCCCCCCEEECCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
PPSLVNTCYSLVGPGYGISVAAVYKLTSDGIVSIKGAGGLTPMDADDDQLSEEATYARGW
CHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
YNNIAQDIWG
HHHHHHHHCC
>Mature Secondary Structure 
SQKFTRRDFSKLVMAGAAGSTLSLFGGAKPLFANQKHVVVVGGGFGGASAAKYIKKLDS
CCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCC
SIAVTLVEPLTTYYTCPFSNWVLGGLKEMKDIAQTYDVLKNTHGVEVIHDTATEIDAANH
CEEEEEEHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCCC
SVTLKGGKVLKYDRLVVSPGIDFDYDAIEGYSEEVANTVMPHAYKAGPQTELLAKQLQEM
EEEECCCEEEEECEEEECCCCCCCHHHHCCHHHHHHHHHCCCHHCCCCHHHHHHHHHHHH
KDGDNVIICPPGNPFRCPPGPYERASLVANYLKKNKPNSKVIILDTKEKFSKQGLFTKGW
HCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHCCCCHHHH
ERLYGDLIEWRAGSAGGKIVSVDPANMTVQTANGPVKGGVINVIPPQKVGKIALDAGLTN
HHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCEEECCCCHHHCCEEEECCCCC
ESGWCPVNPITFESTIHPGIHVIGDASIAGAMPKSGFAASSQGKVTAASIVRLMQGMVPA
CCCCCCCCCEEECCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
PPSLVNTCYSLVGPGYGISVAAVYKLTSDGIVSIKGAGGLTPMDADDDQLSEEATYARGW
CHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
YNNIAQDIWG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]