Definition | Burkholderia multivorans ATCC 17616 chromosome 2, complete genome. |
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Accession | NC_010805 |
Length | 2,473,162 |
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The map label for this gene is yjiN [H]
Identifier: 189352342
GI number: 189352342
Start: 391870
End: 393156
Strand: Direct
Name: yjiN [H]
Synonym: BMULJ_03561
Alternate gene names: 189352342
Gene position: 391870-393156 (Clockwise)
Preceding gene: 189352341
Following gene: 189352345
Centisome position: 15.84
GC content: 66.2
Gene sequence:
>1287_bases ATGACGTCAGACAAAGCCCTTGAACTGAAACGCAGCAAGCGCCGCGCGCTGTGGCTGCTGCTTGCCGCCGTCGCGGTGTT CGTCACGACGATCTTTCTGCCGCGCGGCCCGTGGATCGACGGCGTGAAGGCCGTCGCCGAAGCCGCGATGGTCGGCGCGC TTGCCGACTGGTTCGCGGTCGTCGCGCTATTCCGGCGCGTGCCGATCCCGTTCGTGTCGCGCCACACCGAAATCATTCCG CAGAACAAGGACAAGATTGCCGACAATCTCGCGGTGTTCGTCCGCGAGAAGTTTCTCGGCCCCGACGCGCTCGCCGCGCA GATCCGCCAGCACGATCCCGCGCAACGGCTCGGCGCGTGGCTCGGCGAGCCGGCGAATACCGAGGCGCTCGGCGGCTACG CGACGAAGCTCATGAGCTTCGCGCTCGACATGACCGACGACGCGCGCATCCAGTCGTTCGTGCACGACGCGTTCCGCGCG GCGATCGACCGGATCGACCTGTCGCAGTCGGCCGGCGCGATCCTCGATACGCTGACGAAGGACGGCCGCCATCAGGCGCT GCTCGACGATGCGATCGCGCAGATCGTCGCGGTGCTCGGCAAGGACGAGAACCGCGACGTGATCGCGGGCTTCATCGTCG AATGGCTGAAGACGCAATATCCGAAGGTCGAGAAGATCATGCCGACGCACTGGCTCGGCGAGAACGGCGCCGAGCTTGTC GCGAATGCGGTGAGCCGCGTGCTCGAAGCGGTCGCGGCCGACCCCGAGCATGAGCTGCGTCAGCGCTTCGACCGCATCGT GCACACGCTGACGGAGCGTCTGAAGCACGATCGCGCGTTCATCGACAAGGGCGAAGAAATCAAGCGCTACATCCGCGACG GCGATGCGTTCAACGCCTATCTGAAGGATCTCTGGGTGCAGTTGCGTGCATGGCTGAAGGCCGATCTCGCGCGCCCCGAT TCGGCGCTGCATCGGCAGGCCGCGACACTGGGCGGCTGGCTCGGCGCGCGGCTCGCGGAAAGCTCGGCGCTGCGCGCGTC GCTGAACGAGCATATCGAGCGTGCGGTGCACGAGATGGCGCCCGACTTCGCCGATTTCCTGATGCGGCATATCCGCGATA CGGTGCGCAACTGGGATGCGCGCGAGATGTCGCGGCAGATCGAACTGAATATCGGCAAGGATCTGCAGTACATCCGCATC AACGGCACGCTGGTCGGCGGGCTGATCGGGCTCGGGCTGTATCTGGTGTCGCTCGTGCCGCGCTGGGCCGGCGGCTGGCT GCACTGA
Upstream 100 bases:
>100_bases GCACGCGCGCATGCGTGGCGGCATGGGCGCGTGCGGTGCATTTGGCGGCAACGGCCGACTCGGTGCATATTGGCGGCATC GCGTGCATTGCCCGTTGCCC
Downstream 100 bases:
>100_bases CGCGGCCGCGCGCCGCGCCGCGCCGCGCGGGTACGCGCATCAAGCGTGCGCTTTCGCGCCGTGCAGTTGCAGGCCGAGCG CCTTGATCACTTTCAGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTSDKALELKRSKRRALWLLLAAVAVFVTTIFLPRGPWIDGVKAVAEAAMVGALADWFAVVALFRRVPIPFVSRHTEIIP QNKDKIADNLAVFVREKFLGPDALAAQIRQHDPAQRLGAWLGEPANTEALGGYATKLMSFALDMTDDARIQSFVHDAFRA AIDRIDLSQSAGAILDTLTKDGRHQALLDDAIAQIVAVLGKDENRDVIAGFIVEWLKTQYPKVEKIMPTHWLGENGAELV ANAVSRVLEAVAADPEHELRQRFDRIVHTLTERLKHDRAFIDKGEEIKRYIRDGDAFNAYLKDLWVQLRAWLKADLARPD SALHRQAATLGGWLGARLAESSALRASLNEHIERAVHEMAPDFADFLMRHIRDTVRNWDAREMSRQIELNIGKDLQYIRI NGTLVGGLIGLGLYLVSLVPRWAGGWLH
Sequences:
>Translated_428_residues MTSDKALELKRSKRRALWLLLAAVAVFVTTIFLPRGPWIDGVKAVAEAAMVGALADWFAVVALFRRVPIPFVSRHTEIIP QNKDKIADNLAVFVREKFLGPDALAAQIRQHDPAQRLGAWLGEPANTEALGGYATKLMSFALDMTDDARIQSFVHDAFRA AIDRIDLSQSAGAILDTLTKDGRHQALLDDAIAQIVAVLGKDENRDVIAGFIVEWLKTQYPKVEKIMPTHWLGENGAELV ANAVSRVLEAVAADPEHELRQRFDRIVHTLTERLKHDRAFIDKGEEIKRYIRDGDAFNAYLKDLWVQLRAWLKADLARPD SALHRQAATLGGWLGARLAESSALRASLNEHIERAVHEMAPDFADFLMRHIRDTVRNWDAREMSRQIELNIGKDLQYIRI NGTLVGGLIGLGLYLVSLVPRWAGGWLH >Mature_427_residues TSDKALELKRSKRRALWLLLAAVAVFVTTIFLPRGPWIDGVKAVAEAAMVGALADWFAVVALFRRVPIPFVSRHTEIIPQ NKDKIADNLAVFVREKFLGPDALAAQIRQHDPAQRLGAWLGEPANTEALGGYATKLMSFALDMTDDARIQSFVHDAFRAA IDRIDLSQSAGAILDTLTKDGRHQALLDDAIAQIVAVLGKDENRDVIAGFIVEWLKTQYPKVEKIMPTHWLGENGAELVA NAVSRVLEAVAADPEHELRQRFDRIVHTLTERLKHDRAFIDKGEEIKRYIRDGDAFNAYLKDLWVQLRAWLKADLARPDS ALHRQAATLGGWLGARLAESSALRASLNEHIERAVHEMAPDFADFLMRHIRDTVRNWDAREMSRQIELNIGKDLQYIRIN GTLVGGLIGLGLYLVSLVPRWAGGWLH
Specific function: Unknown
COG id: COG2733
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790793, Length=417, Percent_Identity=53.7170263788969, Blast_Score=447, Evalue=1e-127,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007383 [H]
Pfam domain/function: PF04286 DUF445 [H]
EC number: NA
Molecular weight: Translated: 47926; Mature: 47795
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDKALELKRSKRRALWLLLAAVAVFVTTIFLPRGPWIDGVKAVAEAAMVGALADWFAV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VALFRRVPIPFVSRHTEIIPQNKDKIADNLAVFVREKFLGPDALAAQIRQHDPAQRLGAW HHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH LGEPANTEALGGYATKLMSFALDMTDDARIQSFVHDAFRAAIDRIDLSQSAGAILDTLTK HCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC DGRHQALLDDAIAQIVAVLGKDENRDVIAGFIVEWLKTQYPKVEKIMPTHWLGENGAELV CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHH ANAVSRVLEAVAADPEHELRQRFDRIVHTLTERLKHDRAFIDKGEEIKRYIRDGDAFNAY HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH LKDLWVQLRAWLKADLARPDSALHRQAATLGGWLGARLAESSALRASLNEHIERAVHEMA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PDFADFLMRHIRDTVRNWDAREMSRQIELNIGKDLQYIRINGTLVGGLIGLGLYLVSLVP CHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH RWAGGWLH HHCCCCCC >Mature Secondary Structure TSDKALELKRSKRRALWLLLAAVAVFVTTIFLPRGPWIDGVKAVAEAAMVGALADWFAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VALFRRVPIPFVSRHTEIIPQNKDKIADNLAVFVREKFLGPDALAAQIRQHDPAQRLGAW HHHHHHCCCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH LGEPANTEALGGYATKLMSFALDMTDDARIQSFVHDAFRAAIDRIDLSQSAGAILDTLTK HCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC DGRHQALLDDAIAQIVAVLGKDENRDVIAGFIVEWLKTQYPKVEKIMPTHWLGENGAELV CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHH ANAVSRVLEAVAADPEHELRQRFDRIVHTLTERLKHDRAFIDKGEEIKRYIRDGDAFNAY HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH LKDLWVQLRAWLKADLARPDSALHRQAATLGGWLGARLAESSALRASLNEHIERAVHEMA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PDFADFLMRHIRDTVRNWDAREMSRQIELNIGKDLQYIRINGTLVGGLIGLGLYLVSLVP CHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH RWAGGWLH HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]