Definition | Burkholderia multivorans ATCC 17616 chromosome 2, complete genome. |
---|---|
Accession | NC_010805 |
Length | 2,473,162 |
Click here to switch to the map view.
The map label for this gene is braD [H]
Identifier: 189352198
GI number: 189352198
Start: 235902
End: 237713
Strand: Direct
Name: braD [H]
Synonym: BMULJ_03416
Alternate gene names: 189352198
Gene position: 235902-237713 (Clockwise)
Preceding gene: 189352197
Following gene: 189352199
Centisome position: 9.54
GC content: 70.14
Gene sequence:
>1812_bases ATGGCATCCTGGCTCGACTACACGCTCAACGGCCTCATCGTCGGCAATATCTACGCGCTGCTCGCCGTCGGGCTCGCGTT GATCTTCGGCGTGTCGCATCTGATCAACTTCGCGCACGGCTCGGTCTATATGGTCGGCGCGTTCATCGGCTGGCTGTGCC TGACGCGCTTCGGGCTGCCGCTGCCGGTCGCGCTCGCGGCGGTGCTGCTAGGCTGCGGCGCGCTCGGCGTCGCGATCGAA CGGATCGGGCTGCGGCCGTTGCGTCATGCGGCGCGCATCGCGCCGCTGCTCGCGACGATCGGCATCAGCTTCATCCTCGA CCAGCTCGCGCAGCTCGCGTTCGGCGCGGACCCGCGCGCGGTGCCGACGCCGCTGCCCGACTGGCATCTGCGACTCGGCG GCGCCACGCTCGGGTCGCTCGACCTGCTGATCGCCGGCATCGGCATCGCGGCGGCCGCACTGCTGTACGGCTTCCTGCGC TTTACGCGGCTCGGCTGGGCCGTGCGCGCGACGGCGCAGGATCGCGACGCGGCGCTGCAGATGGGCGTCGACGTCGATCG AGTAAACCAGACGGTGTTCGCGATCGCATGCGCGCTCGGCGGCGTGAGCGGGCTGCTGGTCGGCATGTATTACAACAGCA TCGATCCGGCGATGGGCTTCCAGGCGACGCTAAAGGGCGTCGTCGCGCTGCTGATCGGCGGGCTCGGCAACGTGCCGGGC GCGATCGCGGGGAGCCTGCTGCTCGGGCTCGTCGAAAGCTACGGCGTCGCGCTGTTCGGCACGAGCTATCGCGACCTGTT CGCGTTCGGGCTGCTGATCGTGTTTCTCGTCTGGCGGCCGAACGGCTTGTTCAGCGCGAACCGCGCGCTGCCGCCCGAGC CGATGACGGGCACCTTCCTCGCGGCCGCGAAGGCGCTGCGCGTGCCGCGCCCGGCGATCGTCGCGCTGGTCGCGCTCGCG GTCGTGCTGCCCTGGCTCGGCGCATCGCCTTACGTGCTGCAGACGCTGACCAACGCGTGGCTGTACGGCCTGCTCGCGCT GAGCCTCACGCTCGTCGCCGGCACGGTCGGGCAGATCTCGCTCGGCCATGCGGCGCTGCTCGTGATCGGCGCGTATGCGT CGGCGCTGCTGTCGTCGGATCTCGGCTGGTCGCCGGCCGTGACGATTCCGTGCGCGGGCGCGATCACGGCCGTGCTCGGG ACGCTGCTCGTCTATCCGGCGTTCCGGCTGCGCGGTCACTACGTGTCGATCGCGACGCTCGGCATCGGCGAAGTGGTGAG CCTCGTGATCCTGAACTGGGACGGTCTCACGCGCGGCCCGCTCGGCATCACGGGCATCGCACCGCTGCCGTGGGCGTCGA CCGCACAGGCCGCGTACTGGTTCACGTTGACGGTGCTCGTCGCGTTCGCACTCGTGCAGGTGCGGCTGCTGCGTTCGCAC CTGGGCCGCACGCTGCGCGCGGTGCGCGAGGACGACGTCGCCGCGCGCGCGCACGGGATCGCACCGAACCGCTACAAGGC GATCGCGTTCGCGGTTGGCGGTGTCGCGGCGGGCGTGAGCGGCGGTATTGCGGCACACCTGTACAGCTACATCAATCACC AGACCTTCGATTCGCAGGTGTCGATCCTCGCGCTGACGATGGTGATCCTCGGCGGGCTCGGCAACGTGCTCGGCGGCATC GCGGGCGCGCTCGCGCTGATCGGCCTGCCCGAACTGTTCCGCTGGGCGGCCGACTACCGGATGCTGATCTACGGTCTCGT GCTGCTGCTGCTCGTCCGGTTCCGGCCGCAGGGCTTGCTCGGCACCGTGTGA
Upstream 100 bases:
>100_bases CGCGCACCGTGTATCTCGTCGTGAAGCAGGGCCGGTGGGCGCTGTGGGACGGCGCCCGGCCGCAGCTCGCGGCACGCTGA ACCGTACCGGACGCATCGCA
Downstream 100 bases:
>100_bases GGAGGAATGCGATGACCACCACCCAACCGCCCTTGCTCGACGTGCAAGGGTTGACGCGCCGCTTCGATGGCGTCACGGCG CTCGACGGTGCGAGCCTGAC
Product: branched-chain amino acid ABC-type transport system permease component
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MASWLDYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVALAAVLLGCGALGVAIE RIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPLPDWHLRLGGATLGSLDLLIAGIGIAAAALLYGFLR FTRLGWAVRATAQDRDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAMGFQATLKGVVALLIGGLGNVPG AIAGSLLLGLVESYGVALFGTSYRDLFAFGLLIVFLVWRPNGLFSANRALPPEPMTGTFLAAAKALRVPRPAIVALVALA VVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSDLGWSPAVTIPCAGAITAVLG TLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGITGIAPLPWASTAQAAYWFTLTVLVAFALVQVRLLRSH LGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILALTMVILGGLGNVLGGI AGALALIGLPELFRWAADYRMLIYGLVLLLLVRFRPQGLLGTV
Sequences:
>Translated_603_residues MASWLDYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVALAAVLLGCGALGVAIE RIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPLPDWHLRLGGATLGSLDLLIAGIGIAAAALLYGFLR FTRLGWAVRATAQDRDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAMGFQATLKGVVALLIGGLGNVPG AIAGSLLLGLVESYGVALFGTSYRDLFAFGLLIVFLVWRPNGLFSANRALPPEPMTGTFLAAAKALRVPRPAIVALVALA VVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSDLGWSPAVTIPCAGAITAVLG TLLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGITGIAPLPWASTAQAAYWFTLTVLVAFALVQVRLLRSH LGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILALTMVILGGLGNVLGGI AGALALIGLPELFRWAADYRMLIYGLVLLLLVRFRPQGLLGTV >Mature_602_residues ASWLDYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLPLPVALAAVLLGCGALGVAIER IGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRAVPTPLPDWHLRLGGATLGSLDLLIAGIGIAAAALLYGFLRF TRLGWAVRATAQDRDAALQMGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAMGFQATLKGVVALLIGGLGNVPGA IAGSLLLGLVESYGVALFGTSYRDLFAFGLLIVFLVWRPNGLFSANRALPPEPMTGTFLAAAKALRVPRPAIVALVALAV VLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQISLGHAALLVIGAYASALLSSDLGWSPAVTIPCAGAITAVLGT LLVYPAFRLRGHYVSIATLGIGEVVSLVILNWDGLTRGPLGITGIAPLPWASTAQAAYWFTLTVLVAFALVQVRLLRSHL GRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQVSILALTMVILGGLGNVLGGIA GALALIGLPELFRWAADYRMLIYGLVLLLLVRFRPQGLLGTV
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=292, Percent_Identity=33.2191780821918, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI1789865, Length=287, Percent_Identity=34.8432055749129, Blast_Score=144, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 62876; Mature: 62745
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASWLDYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLP CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC LPVALAAVLLGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRA HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VPTPLPDWHLRLGGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQDRDAALQ CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHH MGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAMGFQATLKGVVALLIGGLGNVPG HCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCH AIAGSLLLGLVESYGVALFGTSYRDLFAFGLLIVFLVWRPNGLFSANRALPPEPMTGTFL HHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH AAAKALRVPRPAIVALVALAVVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQIS HHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LGHAALLVIGAYASALLSSDLGWSPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATL HHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHH GIGEVVSLVILNWDGLTRGPLGITGIAPLPWASTAQAAYWFTLTVLVAFALVQVRLLRSH HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHH SILALTMVILGGLGNVLGGIAGALALIGLPELFRWAADYRMLIYGLVLLLLVRFRPQGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GTV CCC >Mature Secondary Structure ASWLDYTLNGLIVGNIYALLAVGLALIFGVSHLINFAHGSVYMVGAFIGWLCLTRFGLP CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC LPVALAAVLLGCGALGVAIERIGLRPLRHAARIAPLLATIGISFILDQLAQLAFGADPRA HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VPTPLPDWHLRLGGATLGSLDLLIAGIGIAAAALLYGFLRFTRLGWAVRATAQDRDAALQ CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHH MGVDVDRVNQTVFAIACALGGVSGLLVGMYYNSIDPAMGFQATLKGVVALLIGGLGNVPG HCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCH AIAGSLLLGLVESYGVALFGTSYRDLFAFGLLIVFLVWRPNGLFSANRALPPEPMTGTFL HHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH AAAKALRVPRPAIVALVALAVVLPWLGASPYVLQTLTNAWLYGLLALSLTLVAGTVGQIS HHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LGHAALLVIGAYASALLSSDLGWSPAVTIPCAGAITAVLGTLLVYPAFRLRGHYVSIATL HHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHH GIGEVVSLVILNWDGLTRGPLGITGIAPLPWASTAQAAYWFTLTVLVAFALVQVRLLRSH HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGRTLRAVREDDVAARAHGIAPNRYKAIAFAVGGVAAGVSGGIAAHLYSYINHQTFDSQV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHH SILALTMVILGGLGNVLGGIAGALALIGLPELFRWAADYRMLIYGLVLLLLVRFRPQGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GTV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]