Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184762
Identifier: 189184762
GI number: 189184762
Start: 1886203
End: 1887249
Strand: Reverse
Name: 189184762
Synonym: OTT_1855
Alternate gene names: NA
Gene position: 1887249-1886203 (Counterclockwise)
Preceding gene: 189184763
Following gene: 189184761
Centisome position: 93.94
GC content: 31.04
Gene sequence:
>1047_bases TTGAAGTTTAAATATACGGAATCTGATGATTTTATAGAAATTGAGTTAGTAGGAAATGAAAAAGAAAATCAACAGCAACA ACAGAATTTGAATTCCTATGAGCTTAGTGATTTTAGCAATAAAAAGCTATCAAACAAGGATTATGAGCAAAATAGTGAGT TAGTAACTCCAGTTATTACTAAGGATTTAGAGGTTGAAAAGAATAAATGCTGTCCCAAAAGAAAAAGACTAGCAGATTAT TATCCACTAACACCAGAAGATGCAGTTATACTGCAACGTATGTCTAGTAGAAGCTTCAACATATACTTCATAAATCAATT ACTGTTGAAGTTATCAAGTAAATATCCAAATCGTCATTTTGTAAATAAGATAGCAGTGCTAAACTATATGGCAAAAGCGT TAGCAAATGAATTACTAACTACTGAGCAGGCTAATAGTGGAAATTTTAGATTTAATGATGTAGGAAGATTTAAAGAACAG TATCTAGCAAATATTGAATCTGGTACAGATCGTAGTATGAAGGCTCAGTTGAAGCGTAAAATAGCTGGAGTCTTTGAAGC AGATACTGCTTATCAAATTTTAACATCTTGTGATTTTGTAGCAGCGGTTAAAAACAAATATTACATCAAGTTGCTTAAAA ATATCACACTAACAGAATGTGACGAATCAAAGATATTACAAGCTGTACAAGATGTATATGGATACGAAATTCAAGAATTG CAAGTTACACCATTTGAGCAACTCAAAACTGTTTCACAGAAACAAATCAATGAAGAAGAGTATCTCTTGAATCTCAGTAA ACAACTGGGCTCTAACTCGACTTGGTACAAAGTACGAGAATCTTTGATTAAAAGATATGGTCAAGCTATCGATAAATCAT GGTTTAGTCCATTGAAAGTTGTAAATGAAGATAATGTTAATAAAAAAATATTCATTAAAGCAAAAACAGAATTTGCAGAT GATTACATTAGAAACAACTGTATGCAAGGTCTTGAATATGCTTTTAAAGCTCAAGGATTTTCTTTTGAGTTAGTTAAGTT CGAATAA
Upstream 100 bases:
>100_bases TAGATATAATAATAATAAAAAAAATAATAATAGATCTAGATCTACTGAAGATAAGTTAATAGAGAATGATCAAAATAAAA ATGAAGATCAACAGCAAAAT
Downstream 100 bases:
>100_bases TTTTAATAAAATTTAAAGGGTGATATGGAAAAAGATCTTGCAAAGATTGCTCCAAGTAATATTCAGGCAGAGCAAATGAT ACTTGGGGCAATTCTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKFKYTESDDFIEIELVGNEKENQQQQQNLNSYELSDFSNKKLSNKDYEQNSELVTPVITKDLEVEKNKCCPKRKRLADY YPLTPEDAVILQRMSSRSFNIYFINQLLLKLSSKYPNRHFVNKIAVLNYMAKALANELLTTEQANSGNFRFNDVGRFKEQ YLANIESGTDRSMKAQLKRKIAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDESKILQAVQDVYGYEIQEL QVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKRYGQAIDKSWFSPLKVVNEDNVNKKIFIKAKTEFAD DYIRNNCMQGLEYAFKAQGFSFELVKFE
Sequences:
>Translated_348_residues MKFKYTESDDFIEIELVGNEKENQQQQQNLNSYELSDFSNKKLSNKDYEQNSELVTPVITKDLEVEKNKCCPKRKRLADY YPLTPEDAVILQRMSSRSFNIYFINQLLLKLSSKYPNRHFVNKIAVLNYMAKALANELLTTEQANSGNFRFNDVGRFKEQ YLANIESGTDRSMKAQLKRKIAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDESKILQAVQDVYGYEIQEL QVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKRYGQAIDKSWFSPLKVVNEDNVNKKIFIKAKTEFAD DYIRNNCMQGLEYAFKAQGFSFELVKFE >Mature_348_residues MKFKYTESDDFIEIELVGNEKENQQQQQNLNSYELSDFSNKKLSNKDYEQNSELVTPVITKDLEVEKNKCCPKRKRLADY YPLTPEDAVILQRMSSRSFNIYFINQLLLKLSSKYPNRHFVNKIAVLNYMAKALANELLTTEQANSGNFRFNDVGRFKEQ YLANIESGTDRSMKAQLKRKIAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDESKILQAVQDVYGYEIQEL QVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKRYGQAIDKSWFSPLKVVNEDNVNKKIFIKAKTEFAD DYIRNNCMQGLEYAFKAQGFSFELVKFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40557; Mature: 40557
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKYTESDDFIEIELVGNEKENQQQQQNLNSYELSDFSNKKLSNKDYEQNSELVTPVIT CCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEECHHHH KDLEVEKNKCCPKRKRLADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSSKYPNRHF CCCCCCHHCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCHHH VNKIAVLNYMAKALANELLTTEQANSGNFRFNDVGRFKEQYLANIESGTDRSMKAQLKRK HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHH IAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDESKILQAVQDVYGYEIQEL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEE QVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKRYGQAIDKSWFSPLKV ECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH VNEDNVNKKIFIKAKTEFADDYIRNNCMQGLEYAFKAQGFSFELVKFE HCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC >Mature Secondary Structure MKFKYTESDDFIEIELVGNEKENQQQQQNLNSYELSDFSNKKLSNKDYEQNSELVTPVIT CCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEECHHHH KDLEVEKNKCCPKRKRLADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSSKYPNRHF CCCCCCHHCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCHHH VNKIAVLNYMAKALANELLTTEQANSGNFRFNDVGRFKEQYLANIESGTDRSMKAQLKRK HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHH IAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDESKILQAVQDVYGYEIQEL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEE QVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKRYGQAIDKSWFSPLKV ECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH VNEDNVNKKIFIKAKTEFADDYIRNNCMQGLEYAFKAQGFSFELVKFE HCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA