Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184763

Identifier: 189184763

GI number: 189184763

Start: 1887436

End: 1887969

Strand: Reverse

Name: 189184763

Synonym: OTT_1856

Alternate gene names: NA

Gene position: 1887969-1887436 (Counterclockwise)

Preceding gene: 189184764

Following gene: 189184762

Centisome position: 93.98

GC content: 28.65

Gene sequence:

>534_bases
ATGCGCCCTGTAGTATTCGATTTTTTAACTAATAGTTGTAATTTTATTAAAAAAAATAGTAACAATAATGACACAATATT
TTATAACTTTATTGGAAATATCATTCCACCAGAATGGAGAAAGCTAACTGGAGATAATGGAAAAGCATTAAGTAAAACAT
CTAAACAGCTTTTATCATTCATAGTATTTAGACTACATATCTATTACAACAAAGATATAGATGAATTACAGGAAAGTTAT
CAGCTTTATGAGGATAAGCTTAATGTTGGTCAAAGAAGAGTTAGGCAATGCTTAGTAGAATTAAGAGATGCAGGTTTTGT
TGAAGTTGAAAATAGGACAATAATTAAAGACAGCTTTAAGTTGCGTAATGTTCCATGTATAAAACTTCTAAAAAATTTTC
AGCGTTTCACTGAAAAAGAAACAAAAGGAGAAAAAATTATTGATCTAACCCAAAAAATTTTTCGCTCCAACCTGAAAGAA
ATTTCAGGTGAACCTGAAAAAAGTTTCAGGTACATATATAGTCATTTACAATGA

Upstream 100 bases:

>100_bases
TCTACCTATTTTCTACCTTTTGCATAAAAATTTGATGGTAATTTGTAAAAAAAATTATTTTCTAAAACACCTACTATAGC
TGTATTTTTGGAGATGAAAA

Downstream 100 bases:

>100_bases
AGTTTGAGCATAGAAAAAGCGACAATAGCATCATAAGATTTACCAACATGATATTTTATACGCAAACTTCATTGTAAATG
ACTATATAGATATAATAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MRPVVFDFLTNSCNFIKKNSNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVFRLHIYYNKDIDELQESY
QLYEDKLNVGQRRVRQCLVELRDAGFVEVENRTIIKDSFKLRNVPCIKLLKNFQRFTEKETKGEKIIDLTQKIFRSNLKE
ISGEPEKSFRYIYSHLQ

Sequences:

>Translated_177_residues
MRPVVFDFLTNSCNFIKKNSNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVFRLHIYYNKDIDELQESY
QLYEDKLNVGQRRVRQCLVELRDAGFVEVENRTIIKDSFKLRNVPCIKLLKNFQRFTEKETKGEKIIDLTQKIFRSNLKE
ISGEPEKSFRYIYSHLQ
>Mature_177_residues
MRPVVFDFLTNSCNFIKKNSNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSFIVFRLHIYYNKDIDELQESY
QLYEDKLNVGQRRVRQCLVELRDAGFVEVENRTIIKDSFKLRNVPCIKLLKNFQRFTEKETKGEKIIDLTQKIFRSNLKE
ISGEPEKSFRYIYSHLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21027; Mature: 21027

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPVVFDFLTNSCNFIKKNSNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSF
CCCCHHHHHHCCCHHEECCCCCCCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH
IVFRLHIYYNKDIDELQESYQLYEDKLNVGQRRVRQCLVELRDAGFVEVENRTIIKDSFK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCHH
LRNVPCIKLLKNFQRFTEKETKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYSHLQ
HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRPVVFDFLTNSCNFIKKNSNNNDTIFYNFIGNIIPPEWRKLTGDNGKALSKTSKQLLSF
CCCCHHHHHHCCCHHEECCCCCCCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH
IVFRLHIYYNKDIDELQESYQLYEDKLNVGQRRVRQCLVELRDAGFVEVENRTIIKDSFK
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCHH
LRNVPCIKLLKNFQRFTEKETKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYSHLQ
HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA