Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184746
Identifier: 189184746
GI number: 189184746
Start: 1873948
End: 1874454
Strand: Reverse
Name: 189184746
Synonym: OTT_1839
Alternate gene names: NA
Gene position: 1874454-1873948 (Counterclockwise)
Preceding gene: 189184747
Following gene: 189184745
Centisome position: 93.3
GC content: 29.19
Gene sequence:
>507_bases GTGTTAAGGAATGAATTTATCGAGAAGGTAAAGCAAATTTCTAAAGAAAATCTAGTATTTATTGATGAGTCAGGAATAGA GGATAATGCTTGTAGAGAATATGGATGGAGTATAAAAGGTACTAGATGTTATGGCAATAAAGCTTATCAACATAAATCCA GGGTCAGTATAATAGCGGGGCTTTGTAATAATCAAATTATAGCACCAGTAATATTTGAAGGAAATTGTAATAAAGCAATA TTTACAACTTATGTAGAAACTATATTAATCAAAGAATTGCGTCCTGGACAAATAGTAATTATGGATAATATCAACTTTCA TAAGAATACTATAATTAAAGTATTAATAGAATCGGTTGGCTGCAGTATTCTATTCTTACCTACATATAGTCCAGATTTAA ATTCTATAGAACATTATTGGTTTAAGATTAAGAACGAAATAAGAAAAGTTACTGCTCAATTCAAAGATATTAGCATTGCT GTAGCATACGTAATGCAGTTTATCTGA
Upstream 100 bases:
>100_bases TATACTAGGTAATAGATTACAAAGAACTAGAATAAATTATTATAGAAAACTACTAGGATACACTTATAAAAAAACTCATT TTCATTCCAAAAGGGATATT
Downstream 100 bases:
>100_bases TTGTACCTATTTCCTACGTTATTGCTATACCTTAAATTACGAGAAATTGCCATAGAGCTAAATAAATACTGTGAGCTTTA TGCTACCTAATAAGTTAAAG
Product: transposase
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; ISRin2 Transposase OrfB; Transposase Family Protein; Degenerate Transposase; ISSoc4 Transposase OrfAB; Transposase And Inactivated Derivative; Transposase IS; ISHde1 Transposase OrfB; Transposase Fragment
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSIIAGLCNNQIIAPVIFEGNCNKAI FTTYVETILIKELRPGQIVIMDNINFHKNTIIKVLIESVGCSILFLPTYSPDLNSIEHYWFKIKNEIRKVTAQFKDISIA VAYVMQFI
Sequences:
>Translated_168_residues MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSIIAGLCNNQIIAPVIFEGNCNKAI FTTYVETILIKELRPGQIVIMDNINFHKNTIIKVLIESVGCSILFLPTYSPDLNSIEHYWFKIKNEIRKVTAQFKDISIA VAYVMQFI >Mature_168_residues MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSIIAGLCNNQIIAPVIFEGNCNKAI FTTYVETILIKELRPGQIVIMDNINFHKNTIIKVLIESVGCSILFLPTYSPDLNSIEHYWFKIKNEIRKVTAQFKDISIA VAYVMQFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19330; Mature: 19330
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSIIAG CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH LCNNQIIAPVIFEGNCNKAIFTTYVETILIKELRPGQIVIMDNINFHKNTIIKVLIESVG HCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHC CSILFLPTYSPDLNSIEHYWFKIKNEIRKVTAQFKDISIAVAYVMQFI CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLRNEFIEKVKQISKENLVFIDESGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSIIAG CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH LCNNQIIAPVIFEGNCNKAIFTTYVETILIKELRPGQIVIMDNINFHKNTIIKVLIESVG HCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHC CSILFLPTYSPDLNSIEHYWFKIKNEIRKVTAQFKDISIAVAYVMQFI CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA