Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184745

Identifier: 189184745

GI number: 189184745

Start: 1872823

End: 1873737

Strand: Reverse

Name: 189184745

Synonym: OTT_1838

Alternate gene names: NA

Gene position: 1873737-1872823 (Counterclockwise)

Preceding gene: 189184746

Following gene: 189184743

Centisome position: 93.27

GC content: 29.62

Gene sequence:

>915_bases
ATGCATTTATCAAGATTTCTAGATCCAAAGAATGATGTAGCATTTAAAAAGATATTTGGATCAGAAAAAAACAAGGACAT
ACTAATACATTTTCTGAATGATATATTATTGTTTGAAGGGAATAGAGAAATAACAGAAGTAGAGTTTTTAGGAACGATAT
TAGATGCAGACATAGCGTCCAAAAAAGAATCAATAGTAGATGTTTTGTGTAAAGATAAAAACGGAGCGCAATATATAATA
GAAATGCAAGTAGATCCTACGCAAGGATTTGAAAAAAGAGCACAGTATTATGCAGCAAAGGCATATGGTAGGCAACCAAA
TAGAGGAAAGGAAGGAAAATACTCAGACCTAAAGGAAGTTATATTTATAGCTATAGCAGATTATAAATTGTTTCCAAATA
AAGAAGACTATATATCAAGGCATGTAATATTGGATAAAAAGACATATGAGCATGATCTAAAGGACTTTTCATTTACCTTT
ATAGAATTACCAAAATTTAAAAAAAATAGAGTGGAAGAATTAAATGATATAACAGAGAAGTGGTGCTATTTTTTTAAACA
TGCAAAAGAAACAACATTAGATGGATATAATAAAATAGTAGGTGAAGATTTAATAATAAAAAGAGCGTATGAGGCATTAG
ATCAGTTTAATTGGAGTGAAGACGAACTAATAACCTATGAACAAGAGTTAAAGCGTATATGGGATAATAAAGCAGTCGAA
GATTATAAACTCGAACGCGCTAAAGCTGAAGGCAAAGCTGAAGGAATAAAGCTCGGTGAGTCTAAAGGTAAAGCTGAAGC
AAAAAAAGATTTTGCAATAAAATTATTGAAATCTGAATTATCAGTTGAGACAATTGCTGAATATACGGATTTATCAATAC
AAGAAGTATTAAATTTAAAAAATAGTGTAAAATAA

Upstream 100 bases:

>100_bases
GGTTAATGTAGTGAATATCAGAAATTAAAATTCAATAAGAGAATGTTCATGTAAGTTATTTTGTTGTATAATTAAAAAAG
GTAGAAAAAATGAAAAACAT

Downstream 100 bases:

>100_bases
TAATGAATATACAACACAAAATCTTACTTTTGATGTGTTGTATGCTACTTCTATTAGATGTTTTATATCACACTACAAGT
TCTATACTATACTGAACATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII
EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF
IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIVGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
DYKLERAKAEGKAEGIKLGESKGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK

Sequences:

>Translated_304_residues
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII
EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF
IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIVGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
DYKLERAKAEGKAEGIKLGESKGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
>Mature_304_residues
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII
EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF
IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIVGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
DYKLERAKAEGKAEGIKLGESKGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35401; Mature: 35401

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS
CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEV
HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEK
HHHHEECCEECCCCHHHHHHHEEECCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH
WCYFFKHAKETTLDGYNKIVGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH
DYKLERAKAEGKAEGIKLGESKGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLK
HHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NSVK
HCCC
>Mature Secondary Structure
MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS
CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH
KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEV
HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEK
HHHHEECCEECCCCHHHHHHHEEECCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH
WCYFFKHAKETTLDGYNKIVGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH
DYKLERAKAEGKAEGIKLGESKGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLK
HHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
NSVK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA