Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184745
Identifier: 189184745
GI number: 189184745
Start: 1872823
End: 1873737
Strand: Reverse
Name: 189184745
Synonym: OTT_1838
Alternate gene names: NA
Gene position: 1873737-1872823 (Counterclockwise)
Preceding gene: 189184746
Following gene: 189184743
Centisome position: 93.27
GC content: 29.62
Gene sequence:
>915_bases ATGCATTTATCAAGATTTCTAGATCCAAAGAATGATGTAGCATTTAAAAAGATATTTGGATCAGAAAAAAACAAGGACAT ACTAATACATTTTCTGAATGATATATTATTGTTTGAAGGGAATAGAGAAATAACAGAAGTAGAGTTTTTAGGAACGATAT TAGATGCAGACATAGCGTCCAAAAAAGAATCAATAGTAGATGTTTTGTGTAAAGATAAAAACGGAGCGCAATATATAATA GAAATGCAAGTAGATCCTACGCAAGGATTTGAAAAAAGAGCACAGTATTATGCAGCAAAGGCATATGGTAGGCAACCAAA TAGAGGAAAGGAAGGAAAATACTCAGACCTAAAGGAAGTTATATTTATAGCTATAGCAGATTATAAATTGTTTCCAAATA AAGAAGACTATATATCAAGGCATGTAATATTGGATAAAAAGACATATGAGCATGATCTAAAGGACTTTTCATTTACCTTT ATAGAATTACCAAAATTTAAAAAAAATAGAGTGGAAGAATTAAATGATATAACAGAGAAGTGGTGCTATTTTTTTAAACA TGCAAAAGAAACAACATTAGATGGATATAATAAAATAGTAGGTGAAGATTTAATAATAAAAAGAGCGTATGAGGCATTAG ATCAGTTTAATTGGAGTGAAGACGAACTAATAACCTATGAACAAGAGTTAAAGCGTATATGGGATAATAAAGCAGTCGAA GATTATAAACTCGAACGCGCTAAAGCTGAAGGCAAAGCTGAAGGAATAAAGCTCGGTGAGTCTAAAGGTAAAGCTGAAGC AAAAAAAGATTTTGCAATAAAATTATTGAAATCTGAATTATCAGTTGAGACAATTGCTGAATATACGGATTTATCAATAC AAGAAGTATTAAATTTAAAAAATAGTGTAAAATAA
Upstream 100 bases:
>100_bases GGTTAATGTAGTGAATATCAGAAATTAAAATTCAATAAGAGAATGTTCATGTAAGTTATTTTGTTGTATAATTAAAAAAG GTAGAAAAAATGAAAAACAT
Downstream 100 bases:
>100_bases TAATGAATATACAACACAAAATCTTACTTTTGATGTGTTGTATGCTACTTCTATTAGATGTTTTATATCACACTACAAGT TCTATACTATACTGAACATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIVGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGKAEGIKLGESKGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
Sequences:
>Translated_304_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIVGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGKAEGIKLGESKGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK >Mature_304_residues MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIASKKESIVDVLCKDKNGAQYII EMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEVIFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTF IELPKFKKNRVEELNDITEKWCYFFKHAKETTLDGYNKIVGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE DYKLERAKAEGKAEGIKLGESKGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLKNSVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35401; Mature: 35401
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEV HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEK HHHHEECCEECCCCHHHHHHHEEECCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH WCYFFKHAKETTLDGYNKIVGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH DYKLERAKAEGKAEGIKLGESKGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLK HHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH NSVK HCCC >Mature Secondary Structure MHLSRFLDPKNDVAFKKIFGSEKNKDILIHFLNDILLFEGNREITEVEFLGTILDADIAS CCCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH KKESIVDVLCKDKNGAQYIIEMQVDPTQGFEKRAQYYAAKAYGRQPNRGKEGKYSDLKEV HHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH IFIAIADYKLFPNKEDYISRHVILDKKTYEHDLKDFSFTFIELPKFKKNRVEELNDITEK HHHHEECCEECCCCHHHHHHHEEECCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHH WCYFFKHAKETTLDGYNKIVGEDLIIKRAYEALDQFNWSEDELITYEQELKRIWDNKAVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH DYKLERAKAEGKAEGIKLGESKGKAEAKKDFAIKLLKSELSVETIAEYTDLSIQEVLNLK HHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH NSVK HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA