| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is rpoC [H]
Identifier: 189184700
GI number: 189184700
Start: 1819467
End: 1823657
Strand: Reverse
Name: rpoC [H]
Synonym: OTT_1793
Alternate gene names: 189184700
Gene position: 1823657-1819467 (Counterclockwise)
Preceding gene: 189184701
Following gene: 189184699
Centisome position: 90.77
GC content: 34.5
Gene sequence:
>4191_bases ATGGTCGATATTACTAATTTTTTTAAAAAGACTAACAAAGCTGATAGTTCACAAGCATTTAATCGGGTTAGGATTAATAT TGCAAGTCCTGAGCAGATACGTTCATGGTCTTATGGAGAAGTAACAAAACCAGAAACAATTAATTATCGTACATTTAAAC CTGAAAAAGATGGTTTGTTTTGTGCAAAAATATTTGGGCCAGTTAAAGATTATGAATGTTTATGTGGCAAGTACAAACGG ATGAAATATCGAGGTATTGTTTGTGAGAAATGCGGGGTAGAGGTTACGACTTCAAAAGTTAGACGAGAGAGAATGGGGCA TATCGAATTAGCTAGCCCAATTGCTCATATTTGGTTTGTGCGGTCATTACCTTCGCGTATAAGTATTTTATTAGATATGA ATCTTAAAGATTTAGAGAGGGTAATATATTTTGAAGCTTATATAGTTATGGATCCTGGGTTGTCGCCTTTGCATAAAGGT GATTTATTAACTGAGGAAATGCTTCAGCAAGCACAGAATGAATATGGTGAAGATAATTTTATAGTTGGTATAGGGGCTGA AGCTATACGTACTTTGTTAGCTGAATTGGATTTGAAAAGTTTACGGAATGCATTGCAAGAAGAAGTTAATAATGTTATTA ATTCTGACTTTAAAAGAAAAAAAATTCTTAGACGATTAAAGCTTATTGAAGATTTTATAGGTTCTGGTAATAAACCAGAG TGGATGATAGTTACTGTATTGCCTATTATTCCACCTGAACTTAGGCCGCTTGTGATGCTAGATGCTGGGCGATTTGCATC TTCAGATTTAAATGAGCTTTATAGAAGATTGATTAACCGTAATAATCGATTAAAATATTTGAAAAAAGAAGAAGATGGAG TTCCTGGTATTGTTTTGCGTAATGAGCAAAGAATGGTTCAGTTATCAGCGGATACTTTATTTGATAATGGGAAACGTGGT AAAGCTGTTAAAAATAGTAATAAGCGTCCTTTTAAGTCTTTAAGTGATATGCTTAAAGGTAAGCAAGGGCGGTTTAGACA AAATTTACTTGGTAAAAGAGTAGATTATTCTGGGCGTTCTGTGATAGTAGTTGGTCCAGAATTAAAATTACATCAATGCG GTTTGCCTAAACAAATGGCTCTGGAGCTCTTTAAGCCATTTGTTTATGCTGAGCTTGAGCGTTGTGGTATTGCTACTACT ATTAAAGCAGCTAAGCGAATAGTTGAGTTAGGAACTCCAGATGTCTGGAATGCATTAGCAAAGGTAATTAAACACCACCC GGTACTGTTAAATCGCGCACCTACGTTGCATTGCTTGAGTATACAAGCATTTGAACCTGTATTAATTGAAGATAAAGCAA TACAGTTACATCCTTTAGTTTGTACAGCCTTTAACGCTGATTTTGATGGTGACCAGATGGCAGTGCATGTTCCTCTTTCT ACTGAAGCACAGTTAGAAGCTAGAGTATTGATGATGTCAACCAATAATATTCTTAGTCCAGCTAATGGAAGGCCGATTAT TGTTCCTGATAAAGATATAGTGCTAGGCCTTTATTATTTAACTTTATCTATTGATGGTGAAGTTGGAGAAGGCAGATTAT TTGGTAGCATGGCAGAAATACATCATGCTCTGTTTAATAAAGTTGTGAGTTTACATAGTAAGATAAAATTTAGAAAATAT ATTATTAATGCTGATGGAGATAAGGTTATGGCTTTAGTTAATACTACTCCAGGCAGATTAATTTTAGGCGAGTTATTACC TGATGGTGATAGTATAAGTTTTGATGTAGTTAATAAAGTAATGACTAAAAAAGGTATCTCAGCCATTGTTGATATGGTAT ATCGTTACTATGGTCAAAAAGCTACTGTTGTTTTTGCTGACAAGCTTATGAAATTGGGATTTAAGTATGCTTGTATGTCA GGTATTTCATTTGGTATGGATGACATGATAGTTCCTGAGACTAAATCTAAACATGTCAATGATACTTTACTTGAGGTTCA GGAATTTGAGAGGCAATACTCTGAAGGATTAATTACTTCTGGTGAAAAATATAATAAAGTGATTGATGCATGGTCAAGAT ATACTGACAGAGTTGCGAATGATATGATGAAAGGCATTGCTGCCGGAGACCAAACTTCTGTTGGATTAACTAATCAGGAA AGATTAAATTCAATTTTTATGATGGCAGACTCTGAAGCTAGATCTTCTGTTACTCAAATTAAACAGTTAATAGGGAGTAA AGGATTAATAGCTAAGGCGTCAGGAGAAATTATTGATAGACCTATCTTGTCTAATTTTTGTGAAGGATTGACAGTTTTTG AATGTTTTATTGGAATTCCAGGAACACGTAAAGGTTTAGCTGATACTGCTGTAAAGACAAAAGTTTCAGGCCATTTATCT CGTAAGTTAAGCGAATCTGCCCATGGTTATTTTGTTAAAAGAGAGGACTGCGGTACTACAAATGGACTTATCATTACTGC TGTTGTTGAAGGAGGAGTAATTGTAGTTACTTTAGCAGAGCAAGTTTTAGGTAGAGTAGCAGTTAGTAATGTTTATTGTC CAGTTACAAAGGTGTTGATATTACAACAAGGAGAGATGATAGATGAGTATAAGGTTGAGTTAATTAATACAGCAGGAATT AACTCTATTAAGGTGCGTTCTGTTCTTACTTGCGAACTGCAAGAAGGAGTATGCGCTAAATGTTATGGTCGTGATTTGTC TACTGGTAAGTTAGTTGCTATAGGAACAGCAGTAGGTATTGTTGCGGCTCAATCTATTGGTGAGCCTGGAACTCAGTTAA CTATGAGAACGTTCCATATTGGTGGTGCAGCTACTAGAGGAGTTGAAGCTTCATCTTTTGAAGCAATAGTTGATGGTAGA GTTAAGATTATAAATCCAAATTTTGTAGTAAACTCTAATAACAAGTCTGTTATTATGAGTAGATCATGTGAGGTAATATT GGCTGATAATGTAGGTCAAGAAATAACAAGATATAAAGCTCAATATGGTTCTATACTACTCGTGACTGATGGACAAGAAG TTACTAAAGGTACAGCTTTAGTTGTGTGGGACCCATATGCAATGCCTATTGTTACTGAAAAATCTGGTTATGTTATGTTT AAAGATATGATTGATGGAGTTTCAGTTAAGGATATAATAGATGAGTCTACTGGTATTGTTAATAGAGTAATTATTGAGCC TAAACAAGGTAGAGGTGAGGTTGTTTTAAGACCTAGAATTTGCTTATTAGATCAGAATAAGCAGCCTCTTACCTTATCAA ATGGATTAGAAGCTGAATACTTCTTGCCAGTGAATTCAATATTGAGTGTTGAAGAAGGAGTGAATGTGAGTGCTGGAGAT ATTTTAGCTCGTATTCCTCGAGAGTTTGCTGGTACTAAAGATATTACTGGTGGTTTACCAAGAGTAATAGAATTATTTGA GGCTCGTAAACCTAAAAATCATGCTGTTATAGCTGAGATAGATGGTTGTGTGAAATTTGGCAAGGATTATAAGTCTAAGC GTCGCTTAATACTGCAGCCTAATGATGAGAGTCATGAGCCTATTGAATATATTCTACCTAAAGGTAGGCATGTGACAGTA AATGAAGGTGATGTTGTTAAAAAAGGAGATATGTTGATTGAAGGAAGCCCAGTATTACAAGATATTTTAAAAGTTATGGG TGTTGAAGCATTAGGATTATATATAATCAATGAAATTCAAGCGGTTTATAGACTTCAAGGAGTTAAAATTGATAACAAGC ATATTGAAGTTATTATTACCAGAATGTTGCAAAAAGTTGAAATTACTGACTCAGGAGATAGTAATTTTGTTATTGAAGAA AAAGTAAATAAACGAGCAGTAATTAATACTAATAAAAAATTAAAAGCAAAAGGATTAAGGGAAGCTCAATATCGTCCAAT ATTACAGGGTATTACTAAAGCATCATTACAAACTGAATCGTTTATATCTGCTGCTTCATTTCAGGAAACTACAAGAGTTC TTACTGAAGCTGCTATTGCTGGTAAAGTAGATAAGCTTGAAGGATTGAAGGAAAATGTCATTGTAGGACAAACAATACCA GCTGGTACAGGGTTTTATATTAATGAAATTAAAAAGATAGCACGCCAACGTGATAAAGAAATTATTGCAGCTAGGGATGC AGAATTACAGGAAAATAATACTGAAGCATAA
Upstream 100 bases:
>100_bases AATATTTGTTATTGAGTTATTTACTTAAAGCTCTATAAAAATTCATTAGTTCAATGAATTAAAAAAAAGTTTAAGGTTAT TTTTTGGGGAAAGTATTGTT
Downstream 100 bases:
>100_bases ATTTAACTTAAGTCTAAAACTAAATATTTTTTCTATTGTTGAAAGTAAGCTAAATGTAGCTGAGATTGCTTATTCGATCT ATTGTTAAATATATAATTTG
Product: DNA-directed RNA polymerase beta prime chain
Products: NA
Alternate protein names: RNAP subunit beta'; RNA polymerase subunit beta'; Transcriptase subunit beta' [H]
Number of amino acids: Translated: 1396; Mature: 1396
Protein sequence:
>1396_residues MVDITNFFKKTNKADSSQAFNRVRINIASPEQIRSWSYGEVTKPETINYRTFKPEKDGLFCAKIFGPVKDYECLCGKYKR MKYRGIVCEKCGVEVTTSKVRRERMGHIELASPIAHIWFVRSLPSRISILLDMNLKDLERVIYFEAYIVMDPGLSPLHKG DLLTEEMLQQAQNEYGEDNFIVGIGAEAIRTLLAELDLKSLRNALQEEVNNVINSDFKRKKILRRLKLIEDFIGSGNKPE WMIVTVLPIIPPELRPLVMLDAGRFASSDLNELYRRLINRNNRLKYLKKEEDGVPGIVLRNEQRMVQLSADTLFDNGKRG KAVKNSNKRPFKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKQMALELFKPFVYAELERCGIATT IKAAKRIVELGTPDVWNALAKVIKHHPVLLNRAPTLHCLSIQAFEPVLIEDKAIQLHPLVCTAFNADFDGDQMAVHVPLS TEAQLEARVLMMSTNNILSPANGRPIIVPDKDIVLGLYYLTLSIDGEVGEGRLFGSMAEIHHALFNKVVSLHSKIKFRKY IINADGDKVMALVNTTPGRLILGELLPDGDSISFDVVNKVMTKKGISAIVDMVYRYYGQKATVVFADKLMKLGFKYACMS GISFGMDDMIVPETKSKHVNDTLLEVQEFERQYSEGLITSGEKYNKVIDAWSRYTDRVANDMMKGIAAGDQTSVGLTNQE RLNSIFMMADSEARSSVTQIKQLIGSKGLIAKASGEIIDRPILSNFCEGLTVFECFIGIPGTRKGLADTAVKTKVSGHLS RKLSESAHGYFVKREDCGTTNGLIITAVVEGGVIVVTLAEQVLGRVAVSNVYCPVTKVLILQQGEMIDEYKVELINTAGI NSIKVRSVLTCELQEGVCAKCYGRDLSTGKLVAIGTAVGIVAAQSIGEPGTQLTMRTFHIGGAATRGVEASSFEAIVDGR VKIINPNFVVNSNNKSVIMSRSCEVILADNVGQEITRYKAQYGSILLVTDGQEVTKGTALVVWDPYAMPIVTEKSGYVMF KDMIDGVSVKDIIDESTGIVNRVIIEPKQGRGEVVLRPRICLLDQNKQPLTLSNGLEAEYFLPVNSILSVEEGVNVSAGD ILARIPREFAGTKDITGGLPRVIELFEARKPKNHAVIAEIDGCVKFGKDYKSKRRLILQPNDESHEPIEYILPKGRHVTV NEGDVVKKGDMLIEGSPVLQDILKVMGVEALGLYIINEIQAVYRLQGVKIDNKHIEVIITRMLQKVEITDSGDSNFVIEE KVNKRAVINTNKKLKAKGLREAQYRPILQGITKASLQTESFISAASFQETTRVLTEAAIAGKVDKLEGLKENVIVGQTIP AGTGFYINEIKKIARQRDKEIIAARDAELQENNTEA
Sequences:
>Translated_1396_residues MVDITNFFKKTNKADSSQAFNRVRINIASPEQIRSWSYGEVTKPETINYRTFKPEKDGLFCAKIFGPVKDYECLCGKYKR MKYRGIVCEKCGVEVTTSKVRRERMGHIELASPIAHIWFVRSLPSRISILLDMNLKDLERVIYFEAYIVMDPGLSPLHKG DLLTEEMLQQAQNEYGEDNFIVGIGAEAIRTLLAELDLKSLRNALQEEVNNVINSDFKRKKILRRLKLIEDFIGSGNKPE WMIVTVLPIIPPELRPLVMLDAGRFASSDLNELYRRLINRNNRLKYLKKEEDGVPGIVLRNEQRMVQLSADTLFDNGKRG KAVKNSNKRPFKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKQMALELFKPFVYAELERCGIATT IKAAKRIVELGTPDVWNALAKVIKHHPVLLNRAPTLHCLSIQAFEPVLIEDKAIQLHPLVCTAFNADFDGDQMAVHVPLS TEAQLEARVLMMSTNNILSPANGRPIIVPDKDIVLGLYYLTLSIDGEVGEGRLFGSMAEIHHALFNKVVSLHSKIKFRKY IINADGDKVMALVNTTPGRLILGELLPDGDSISFDVVNKVMTKKGISAIVDMVYRYYGQKATVVFADKLMKLGFKYACMS GISFGMDDMIVPETKSKHVNDTLLEVQEFERQYSEGLITSGEKYNKVIDAWSRYTDRVANDMMKGIAAGDQTSVGLTNQE RLNSIFMMADSEARSSVTQIKQLIGSKGLIAKASGEIIDRPILSNFCEGLTVFECFIGIPGTRKGLADTAVKTKVSGHLS RKLSESAHGYFVKREDCGTTNGLIITAVVEGGVIVVTLAEQVLGRVAVSNVYCPVTKVLILQQGEMIDEYKVELINTAGI NSIKVRSVLTCELQEGVCAKCYGRDLSTGKLVAIGTAVGIVAAQSIGEPGTQLTMRTFHIGGAATRGVEASSFEAIVDGR VKIINPNFVVNSNNKSVIMSRSCEVILADNVGQEITRYKAQYGSILLVTDGQEVTKGTALVVWDPYAMPIVTEKSGYVMF KDMIDGVSVKDIIDESTGIVNRVIIEPKQGRGEVVLRPRICLLDQNKQPLTLSNGLEAEYFLPVNSILSVEEGVNVSAGD ILARIPREFAGTKDITGGLPRVIELFEARKPKNHAVIAEIDGCVKFGKDYKSKRRLILQPNDESHEPIEYILPKGRHVTV NEGDVVKKGDMLIEGSPVLQDILKVMGVEALGLYIINEIQAVYRLQGVKIDNKHIEVIITRMLQKVEITDSGDSNFVIEE KVNKRAVINTNKKLKAKGLREAQYRPILQGITKASLQTESFISAASFQETTRVLTEAAIAGKVDKLEGLKENVIVGQTIP AGTGFYINEIKKIARQRDKEIIAARDAELQENNTEA >Mature_1396_residues MVDITNFFKKTNKADSSQAFNRVRINIASPEQIRSWSYGEVTKPETINYRTFKPEKDGLFCAKIFGPVKDYECLCGKYKR MKYRGIVCEKCGVEVTTSKVRRERMGHIELASPIAHIWFVRSLPSRISILLDMNLKDLERVIYFEAYIVMDPGLSPLHKG DLLTEEMLQQAQNEYGEDNFIVGIGAEAIRTLLAELDLKSLRNALQEEVNNVINSDFKRKKILRRLKLIEDFIGSGNKPE WMIVTVLPIIPPELRPLVMLDAGRFASSDLNELYRRLINRNNRLKYLKKEEDGVPGIVLRNEQRMVQLSADTLFDNGKRG KAVKNSNKRPFKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKQMALELFKPFVYAELERCGIATT IKAAKRIVELGTPDVWNALAKVIKHHPVLLNRAPTLHCLSIQAFEPVLIEDKAIQLHPLVCTAFNADFDGDQMAVHVPLS TEAQLEARVLMMSTNNILSPANGRPIIVPDKDIVLGLYYLTLSIDGEVGEGRLFGSMAEIHHALFNKVVSLHSKIKFRKY IINADGDKVMALVNTTPGRLILGELLPDGDSISFDVVNKVMTKKGISAIVDMVYRYYGQKATVVFADKLMKLGFKYACMS GISFGMDDMIVPETKSKHVNDTLLEVQEFERQYSEGLITSGEKYNKVIDAWSRYTDRVANDMMKGIAAGDQTSVGLTNQE RLNSIFMMADSEARSSVTQIKQLIGSKGLIAKASGEIIDRPILSNFCEGLTVFECFIGIPGTRKGLADTAVKTKVSGHLS RKLSESAHGYFVKREDCGTTNGLIITAVVEGGVIVVTLAEQVLGRVAVSNVYCPVTKVLILQQGEMIDEYKVELINTAGI NSIKVRSVLTCELQEGVCAKCYGRDLSTGKLVAIGTAVGIVAAQSIGEPGTQLTMRTFHIGGAATRGVEASSFEAIVDGR VKIINPNFVVNSNNKSVIMSRSCEVILADNVGQEITRYKAQYGSILLVTDGQEVTKGTALVVWDPYAMPIVTEKSGYVMF KDMIDGVSVKDIIDESTGIVNRVIIEPKQGRGEVVLRPRICLLDQNKQPLTLSNGLEAEYFLPVNSILSVEEGVNVSAGD ILARIPREFAGTKDITGGLPRVIELFEARKPKNHAVIAEIDGCVKFGKDYKSKRRLILQPNDESHEPIEYILPKGRHVTV NEGDVVKKGDMLIEGSPVLQDILKVMGVEALGLYIINEIQAVYRLQGVKIDNKHIEVIITRMLQKVEITDSGDSNFVIEE KVNKRAVINTNKKLKAKGLREAQYRPILQGITKASLQTESFISAASFQETTRVLTEAAIAGKVDKLEGLKENVIVGQTIP AGTGFYINEIKKIARQRDKEIIAARDAELQENNTEA
Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates [H]
COG id: COG0086
COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RNA polymerase beta' chain family [H]
Homologues:
Organism=Homo sapiens, GI4505939, Length=841, Percent_Identity=24.3757431629013, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI39725938, Length=645, Percent_Identity=26.046511627907, Blast_Score=149, Evalue=2e-35, Organism=Homo sapiens, GI103471997, Length=596, Percent_Identity=25.8389261744966, Blast_Score=104, Evalue=7e-22, Organism=Escherichia coli, GI2367335, Length=1379, Percent_Identity=55.1849166062364, Blast_Score=1511, Evalue=0.0, Organism=Caenorhabditis elegans, GI25145495, Length=704, Percent_Identity=25.9943181818182, Blast_Score=164, Evalue=3e-40, Organism=Caenorhabditis elegans, GI71987878, Length=632, Percent_Identity=24.0506329113924, Blast_Score=154, Evalue=5e-37, Organism=Saccharomyces cerevisiae, GI6320061, Length=948, Percent_Identity=24.1561181434599, Blast_Score=170, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6324690, Length=695, Percent_Identity=25.3237410071942, Blast_Score=138, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6324917, Length=618, Percent_Identity=25.0809061488673, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI17530899, Length=830, Percent_Identity=23.7349397590361, Blast_Score=157, Evalue=5e-38, Organism=Drosophila melanogaster, GI281360912, Length=849, Percent_Identity=23.6749116607774, Blast_Score=141, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000722 - InterPro: IPR006592 - InterPro: IPR007080 - InterPro: IPR007066 - InterPro: IPR007083 - InterPro: IPR007081 - InterPro: IPR012754 [H]
Pfam domain/function: PF04997 RNA_pol_Rpb1_1; PF00623 RNA_pol_Rpb1_2; PF04983 RNA_pol_Rpb1_3; PF05000 RNA_pol_Rpb1_4; PF04998 RNA_pol_Rpb1_5 [H]
EC number: =2.7.7.6 [H]
Molecular weight: Translated: 154839; Mature: 154839
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDITNFFKKTNKADSSQAFNRVRINIASPEQIRSWSYGEVTKPETINYRTFKPEKDGLF CCCHHHHHHHCCCCCCHHCCCEEEEEECCHHHHCCCCCCCCCCCCCCCEEECCCCCCCEE CAKIFGPVKDYECLCGKYKRMKYRGIVCEKCGVEVTTSKVRRERMGHIELASPIAHIWFV EEHHHCCCCHHHHHHHHHHHHHHCCEEEHHCCCEEHHHHHHHHHCCCEEHHHHHHHHHHH RSLPSRISILLDMNLKDLERVIYFEAYIVMDPGLSPLHKGDLLTEEMLQQAQNEYGEDNF HHCCCCEEEEEECCHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCE IVGIGAEAIRTLLAELDLKSLRNALQEEVNNVINSDFKRKKILRRLKLIEDFIGSGNKPE EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC WMIVTVLPIIPPELRPLVMLDAGRFASSDLNELYRRLINRNNRLKYLKKEEDGVPGIVLR EEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEE NEQRMVQLSADTLFDNGKRGKAVKNSNKRPFKSLSDMLKGKQGRFRQNLLGKRVDYSGRS CCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCE VIVVGPELKLHQCGLPKQMALELFKPFVYAELERCGIATTIKAAKRIVELGTPDVWNALA EEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHH KVIKHHPVLLNRAPTLHCLSIQAFEPVLIEDKAIQLHPLVCTAFNADFDGDQMAVHVPLS HHHHCCCEEEECCCCEEEEEEECCCCEEEECCCEEEEEEEEEEECCCCCCCEEEEEECCC TEAQLEARVLMMSTNNILSPANGRPIIVPDKDIVLGLYYLTLSIDGEVGEGRLFGSMAEI CCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCHHHHHHHHH HHALFNKVVSLHSKIKFRKYIINADGDKVMALVNTTPGRLILGELLPDGDSISFDVVNKV HHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCEEEHHHCCCCCCCHHHHHHHH MTKKGISAIVDMVYRYYGQKATVVFADKLMKLGFKYACMSGISFGMDDMIVPETKSKHVN HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCH DTLLEVQEFERQYSEGLITSGEKYNKVIDAWSRYTDRVANDMMKGIAAGDQTSVGLTNQE HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH RLNSIFMMADSEARSSVTQIKQLIGSKGLIAKASGEIIDRPILSNFCEGLTVFECFIGIP HHCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHCHHHHHHHHCHHHHHHHHHCCC GTRKGLADTAVKTKVSGHLSRKLSESAHGYFVKREDCGTTNGLIITAVVEGGVIVVTLAE CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEEHH QVLGRVAVSNVYCPVTKVLILQQGEMIDEYKVELINTAGINSIKVRSVLTCELQEGVCAK HHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHEEEEECCCCCCEEEEEEEEEECCCCCCHH CYGRDLSTGKLVAIGTAVGIVAAQSIGEPGTQLTMRTFHIGGAATRGVEASSFEAIVDGR HCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCHHEECCE VKIINPNFVVNSNNKSVIMSRSCEVILADNVGQEITRYKAQYGSILLVTDGQEVTKGTAL EEEECCEEEEECCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCEEEEECCCHHCCCCEE VVWDPYAMPIVTEKSGYVMFKDMIDGVSVKDIIDESTGIVNRVIIEPKQGRGEVVLRPRI EEECCCCCEEEECCCCCEEEHHHHCCCCHHHHHCCCCCCEEEEEECCCCCCCCEEECCEE CLLDQNKQPLTLSNGLEAEYFLPVNSILSVEEGVNVSAGDILARIPREFAGTKDITGGLP EEECCCCCCEEECCCCCEEEEECHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCCCCCCHH RVIELFEARKPKNHAVIAEIDGCVKFGKDYKSKRRLILQPNDESHEPIEYILPKGRHVTV HHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHCCCCCEEEE NEGDVVKKGDMLIEGSPVLQDILKVMGVEALGLYIINEIQAVYRLQGVKIDNKHIEVIIT CCCCEEECCCEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHH RMLQKVEITDSGDSNFVIEEKVNKRAVINTNKKLKAKGLREAQYRPILQGITKASLQTES HHHHHEEEECCCCCCEEEECCCCCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH FISAASFQETTRVLTEAAIAGKVDKLEGLKENVIVGQTIPAGTGFYINEIKKIARQRDKE HHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHCEEEECCCCCCCCHHHHHHHHHHHHHCHH IIAARDAELQENNTEA EEECCCCCCCCCCCCC >Mature Secondary Structure MVDITNFFKKTNKADSSQAFNRVRINIASPEQIRSWSYGEVTKPETINYRTFKPEKDGLF CCCHHHHHHHCCCCCCHHCCCEEEEEECCHHHHCCCCCCCCCCCCCCCEEECCCCCCCEE CAKIFGPVKDYECLCGKYKRMKYRGIVCEKCGVEVTTSKVRRERMGHIELASPIAHIWFV EEHHHCCCCHHHHHHHHHHHHHHCCEEEHHCCCEEHHHHHHHHHCCCEEHHHHHHHHHHH RSLPSRISILLDMNLKDLERVIYFEAYIVMDPGLSPLHKGDLLTEEMLQQAQNEYGEDNF HHCCCCEEEEEECCHHHHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCE IVGIGAEAIRTLLAELDLKSLRNALQEEVNNVINSDFKRKKILRRLKLIEDFIGSGNKPE EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC WMIVTVLPIIPPELRPLVMLDAGRFASSDLNELYRRLINRNNRLKYLKKEEDGVPGIVLR EEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEE NEQRMVQLSADTLFDNGKRGKAVKNSNKRPFKSLSDMLKGKQGRFRQNLLGKRVDYSGRS CCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCE VIVVGPELKLHQCGLPKQMALELFKPFVYAELERCGIATTIKAAKRIVELGTPDVWNALA EEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHH KVIKHHPVLLNRAPTLHCLSIQAFEPVLIEDKAIQLHPLVCTAFNADFDGDQMAVHVPLS HHHHCCCEEEECCCCEEEEEEECCCCEEEECCCEEEEEEEEEEECCCCCCCEEEEEECCC TEAQLEARVLMMSTNNILSPANGRPIIVPDKDIVLGLYYLTLSIDGEVGEGRLFGSMAEI CCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCHHHHHHHHH HHALFNKVVSLHSKIKFRKYIINADGDKVMALVNTTPGRLILGELLPDGDSISFDVVNKV HHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCEEEHHHCCCCCCCHHHHHHHH MTKKGISAIVDMVYRYYGQKATVVFADKLMKLGFKYACMSGISFGMDDMIVPETKSKHVN HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCH DTLLEVQEFERQYSEGLITSGEKYNKVIDAWSRYTDRVANDMMKGIAAGDQTSVGLTNQE HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH RLNSIFMMADSEARSSVTQIKQLIGSKGLIAKASGEIIDRPILSNFCEGLTVFECFIGIP HHCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHCHHHHHHHHCHHHHHHHHHCCC GTRKGLADTAVKTKVSGHLSRKLSESAHGYFVKREDCGTTNGLIITAVVEGGVIVVTLAE CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEEHH QVLGRVAVSNVYCPVTKVLILQQGEMIDEYKVELINTAGINSIKVRSVLTCELQEGVCAK HHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHEEEEECCCCCCEEEEEEEEEECCCCCCHH CYGRDLSTGKLVAIGTAVGIVAAQSIGEPGTQLTMRTFHIGGAATRGVEASSFEAIVDGR HCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCHHEECCE VKIINPNFVVNSNNKSVIMSRSCEVILADNVGQEITRYKAQYGSILLVTDGQEVTKGTAL EEEECCEEEEECCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCEEEEECCCHHCCCCEE VVWDPYAMPIVTEKSGYVMFKDMIDGVSVKDIIDESTGIVNRVIIEPKQGRGEVVLRPRI EEECCCCCEEEECCCCCEEEHHHHCCCCHHHHHCCCCCCEEEEEECCCCCCCCEEECCEE CLLDQNKQPLTLSNGLEAEYFLPVNSILSVEEGVNVSAGDILARIPREFAGTKDITGGLP EEECCCCCCEEECCCCCEEEEECHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCCCCCCHH RVIELFEARKPKNHAVIAEIDGCVKFGKDYKSKRRLILQPNDESHEPIEYILPKGRHVTV HHHHHHHCCCCCCCEEEEEEHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHCCCCCEEEE NEGDVVKKGDMLIEGSPVLQDILKVMGVEALGLYIINEIQAVYRLQGVKIDNKHIEVIIT CCCCEEECCCEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHH RMLQKVEITDSGDSNFVIEEKVNKRAVINTNKKLKAKGLREAQYRPILQGITKASLQTES HHHHHEEEECCCCCCEEEECCCCCCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH FISAASFQETTRVLTEAAIAGKVDKLEGLKENVIVGQTIPAGTGFYINEIKKIARQRDKE HHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHCEEEECCCCCCCCHHHHHHHHHHHHHCHH IIAARDAELQENNTEA EEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA