Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
---|---|
Accession | NC_010793 |
Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is 189184687
Identifier: 189184687
GI number: 189184687
Start: 1806032
End: 1806463
Strand: Reverse
Name: 189184687
Synonym: OTT_1780
Alternate gene names: NA
Gene position: 1806463-1806032 (Counterclockwise)
Preceding gene: 189184690
Following gene: 189184683
Centisome position: 89.92
GC content: 28.47
Gene sequence:
>432_bases ATGAAAACATATTTATTGGATATACAAGATAATCGGTTATTAAATAAACGTTCTTTAATTGAGTCTGTTTTTTTTAATGT ACTAAAAAAACATATCCATTTAGAGCATACTAGACACCGCTCTCCTCTTAATTTCTTTGTTCATATAATTGCTTCTCTTG CTAGTTATTCTATCTCTAAACTTAATCCCCATCTTATCTCTTCTTTTCCTGACTCCTTATCCTCAATTGACGTTTATAAC TCAAGTAATATAGATAATAATTTTTACAATCCTTGCATGAAGATACATAAAAATATATCGCTATTGTTAATAACTCAGCT AAGGACAACTTCCCATCTCTGTTCCTTTGATTACTACTTGGTATTAATCTCTTTCTCTCACACTCTTGATATATCTTGCA AAAATTGTCTATTAAATAGTATACTGTTATAA
Upstream 100 bases:
>100_bases AAATCTGTATATATTACTTAGTGTGTTTTCTTGTCTACCACTATTTGAGTTTTAGTGGCTGACCAATGGTCTACGTTTAT TTACTAATCTTCGTAAAGAT
Downstream 100 bases:
>100_bases TACATTTTTTCATGTTGGGTTATTCCTTGTTTATTTAAATTTTTTTATAACTCAACATTCTCTCTTTGTATACCTTTTAT TCTCTACATTTCATATTTCC
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKTYLLDIQDNRLLNKRSLIESVFFNVLKKHIHLEHTRHRSPLNFFVHIIASLASYSISKLNPHLISSFPDSLSSIDVYN SSNIDNNFYNPCMKIHKNISLLLITQLRTTSHLCSFDYYLVLISFSHTLDISCKNCLLNSILL
Sequences:
>Translated_143_residues MKTYLLDIQDNRLLNKRSLIESVFFNVLKKHIHLEHTRHRSPLNFFVHIIASLASYSISKLNPHLISSFPDSLSSIDVYN SSNIDNNFYNPCMKIHKNISLLLITQLRTTSHLCSFDYYLVLISFSHTLDISCKNCLLNSILL >Mature_143_residues MKTYLLDIQDNRLLNKRSLIESVFFNVLKKHIHLEHTRHRSPLNFFVHIIASLASYSISKLNPHLISSFPDSLSSIDVYN SSNIDNNFYNPCMKIHKNISLLLITQLRTTSHLCSFDYYLVLISFSHTLDISCKNCLLNSILL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16568; Mature: 16568
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYLLDIQDNRLLNKRSLIESVFFNVLKKHIHLEHTRHRSPLNFFVHIIASLASYSISK CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LNPHLISSFPDSLSSIDVYNSSNIDNNFYNPCMKIHKNISLLLITQLRTTSHLCSFDYYL CCHHHHHHCCCCHHHEECCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHH VLISFSHTLDISCKNCLLNSILL EEEECCCEECCHHHHHHHHHHCC >Mature Secondary Structure MKTYLLDIQDNRLLNKRSLIESVFFNVLKKHIHLEHTRHRSPLNFFVHIIASLASYSISK CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LNPHLISSFPDSLSSIDVYNSSNIDNNFYNPCMKIHKNISLLLITQLRTTSHLCSFDYYL CCHHHHHHCCCCHHHEECCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHH VLISFSHTLDISCKNCLLNSILL EEEECCCEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA