Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184641
Identifier: 189184641
GI number: 189184641
Start: 1755442
End: 1755555
Strand: Reverse
Name: 189184641
Synonym: OTT_1734
Alternate gene names: NA
Gene position: 1755555-1755442 (Counterclockwise)
Preceding gene: 189184642
Following gene: 189184640
Centisome position: 87.39
GC content: 34.21
Gene sequence:
>114_bases ATGAGCATTAGAATCAGAGTTTATGTTATTGCAGCATTATTTTCGCTACAAGCTCCAGTATCACTAGCTTGGAATTTGGA ATATCGAAGACGTATTTTAAGGAATGAGTGTTAA
Upstream 100 bases:
>100_bases AAAATATACTGAATTCAGTAGCTAGAGGCATAATCTCTGAGAATAAAATTATCGACAATATTATAGCAATCGATAGATAT TATCATAAGTTGGAGACTAG
Downstream 100 bases:
>100_bases TGTCACTAGATCTGGATCATATCAGGATCAAGCGGCTGGATATTATGCAGCTGGTGGATTATCTGCTCGAACAAGCCAAA CATCATTTCAGCCATTTGCT
Product: putative conjugative transfer protein TraH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 37; Mature: 36
Protein sequence:
>37_residues MSIRIRVYVIAALFSLQAPVSLAWNLEYRRRILRNEC
Sequences:
>Translated_37_residues MSIRIRVYVIAALFSLQAPVSLAWNLEYRRRILRNEC >Mature_36_residues SIRIRVYVIAALFSLQAPVSLAWNLEYRRRILRNEC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4422; Mature: 4291
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRIRVYVIAALFSLQAPVSLAWNLEYRRRILRNEC CCEEEEHHHHHHHHHCCCCCEEEECHHHHHHHHHCCC >Mature Secondary Structure SIRIRVYVIAALFSLQAPVSLAWNLEYRRRILRNEC CEEEEHHHHHHHHHCCCCCEEEECHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA