Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184642

Identifier: 189184642

GI number: 189184642

Start: 1755631

End: 1756023

Strand: Reverse

Name: 189184642

Synonym: OTT_1735

Alternate gene names: NA

Gene position: 1756023-1755631 (Counterclockwise)

Preceding gene: 189184643

Following gene: 189184641

Centisome position: 87.41

GC content: 27.99

Gene sequence:

>393_bases
ATGCCAGTAACAGTATTTAAATTTACACAATCAGCATTAAATAAAATAAAAGTACCAACGAAAGAAGAAAATATAATCCA
GTTTAGAAATACAAAAGAAAGAAACCTACTTTTGATAATATCATATACTGGATTTAGAAGATTTTATTTAGTAATAAACA
TTGGTGGCATATATTATAAGATAAAAATAGGAACTTCACCAGATCTGACTGTAAAAGAGGCTAGGAAGAAGGTAATGAAG
TTGAAAAAGGATATTGCTAAAGGAATAAATCCAATGGATGAAAGAAGGAAGATAAATAAAGAAAGAAGAGAAAAAAGAGA
GAAGAGGCTTAAATTAAAGAATGAACTAACATTAGGACATGTGCATGAAAAATATACTGAATTCAGTAGCTAG

Upstream 100 bases:

>100_bases
AATAAAAATCATACTACAGACTATAAGTTTAAGCTAATTTTAAAAATTAATAAGTTATTATTTAATTACTTCAATTTTAA
ATTAATGAAGGGTGATAAAT

Downstream 100 bases:

>100_bases
AGGCATAATCTCTGAGAATAAAATTATCGACAATATTATAGCAATCGATAGATATTATCATAAGTTGGAGACTAGATGAG
CATTAGAATCAGAGTTTATG

Product: putative integrase

Products: NA

Alternate protein names: Phage-Related Integrase

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MPVTVFKFTQSALNKIKVPTKEENIIQFRNTKERNLLLIISYTGFRRFYLVINIGGIYYKIKIGTSPDLTVKEARKKVMK
LKKDIAKGINPMDERRKINKERREKREKRLKLKNELTLGHVHEKYTEFSS

Sequences:

>Translated_130_residues
MPVTVFKFTQSALNKIKVPTKEENIIQFRNTKERNLLLIISYTGFRRFYLVINIGGIYYKIKIGTSPDLTVKEARKKVMK
LKKDIAKGINPMDERRKINKERREKREKRLKLKNELTLGHVHEKYTEFSS
>Mature_129_residues
PVTVFKFTQSALNKIKVPTKEENIIQFRNTKERNLLLIISYTGFRRFYLVINIGGIYYKIKIGTSPDLTVKEARKKVMKL
KKDIAKGINPMDERRKINKERREKREKRLKLKNELTLGHVHEKYTEFSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15429; Mature: 15297

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: PS01023 PTR2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVTVFKFTQSALNKIKVPTKEENIIQFRNTKERNLLLIISYTGFRRFYLVINIGGIYYK
CCEEEHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEEEEECCEEEE
IKIGTSPDLTVKEARKKVMKLKKDIAKGINPMDERRKINKERREKREKRLKLKNELTLGH
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VHEKYTEFSS
HHHHHHCCCC
>Mature Secondary Structure 
PVTVFKFTQSALNKIKVPTKEENIIQFRNTKERNLLLIISYTGFRRFYLVINIGGIYYK
CEEEHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEEEEECCEEEE
IKIGTSPDLTVKEARKKVMKLKKDIAKGINPMDERRKINKERREKREKRLKLKNELTLGH
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VHEKYTEFSS
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA