Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184642
Identifier: 189184642
GI number: 189184642
Start: 1755631
End: 1756023
Strand: Reverse
Name: 189184642
Synonym: OTT_1735
Alternate gene names: NA
Gene position: 1756023-1755631 (Counterclockwise)
Preceding gene: 189184643
Following gene: 189184641
Centisome position: 87.41
GC content: 27.99
Gene sequence:
>393_bases ATGCCAGTAACAGTATTTAAATTTACACAATCAGCATTAAATAAAATAAAAGTACCAACGAAAGAAGAAAATATAATCCA GTTTAGAAATACAAAAGAAAGAAACCTACTTTTGATAATATCATATACTGGATTTAGAAGATTTTATTTAGTAATAAACA TTGGTGGCATATATTATAAGATAAAAATAGGAACTTCACCAGATCTGACTGTAAAAGAGGCTAGGAAGAAGGTAATGAAG TTGAAAAAGGATATTGCTAAAGGAATAAATCCAATGGATGAAAGAAGGAAGATAAATAAAGAAAGAAGAGAAAAAAGAGA GAAGAGGCTTAAATTAAAGAATGAACTAACATTAGGACATGTGCATGAAAAATATACTGAATTCAGTAGCTAG
Upstream 100 bases:
>100_bases AATAAAAATCATACTACAGACTATAAGTTTAAGCTAATTTTAAAAATTAATAAGTTATTATTTAATTACTTCAATTTTAA ATTAATGAAGGGTGATAAAT
Downstream 100 bases:
>100_bases AGGCATAATCTCTGAGAATAAAATTATCGACAATATTATAGCAATCGATAGATATTATCATAAGTTGGAGACTAGATGAG CATTAGAATCAGAGTTTATG
Product: putative integrase
Products: NA
Alternate protein names: Phage-Related Integrase
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MPVTVFKFTQSALNKIKVPTKEENIIQFRNTKERNLLLIISYTGFRRFYLVINIGGIYYKIKIGTSPDLTVKEARKKVMK LKKDIAKGINPMDERRKINKERREKREKRLKLKNELTLGHVHEKYTEFSS
Sequences:
>Translated_130_residues MPVTVFKFTQSALNKIKVPTKEENIIQFRNTKERNLLLIISYTGFRRFYLVINIGGIYYKIKIGTSPDLTVKEARKKVMK LKKDIAKGINPMDERRKINKERREKREKRLKLKNELTLGHVHEKYTEFSS >Mature_129_residues PVTVFKFTQSALNKIKVPTKEENIIQFRNTKERNLLLIISYTGFRRFYLVINIGGIYYKIKIGTSPDLTVKEARKKVMKL KKDIAKGINPMDERRKINKERREKREKRLKLKNELTLGHVHEKYTEFSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15429; Mature: 15297
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: PS01023 PTR2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTVFKFTQSALNKIKVPTKEENIIQFRNTKERNLLLIISYTGFRRFYLVINIGGIYYK CCEEEHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEEEEECCEEEE IKIGTSPDLTVKEARKKVMKLKKDIAKGINPMDERRKINKERREKREKRLKLKNELTLGH EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH VHEKYTEFSS HHHHHHCCCC >Mature Secondary Structure PVTVFKFTQSALNKIKVPTKEENIIQFRNTKERNLLLIISYTGFRRFYLVINIGGIYYK CEEEHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEEEEECCEEEE IKIGTSPDLTVKEARKKVMKLKKDIAKGINPMDERRKINKERREKREKRLKLKNELTLGH EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH VHEKYTEFSS HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA