Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184634
Identifier: 189184634
GI number: 189184634
Start: 1748668
End: 1749396
Strand: Reverse
Name: 189184634
Synonym: OTT_1727
Alternate gene names: NA
Gene position: 1749396-1748668 (Counterclockwise)
Preceding gene: 189184636
Following gene: 189184633
Centisome position: 87.08
GC content: 28.94
Gene sequence:
>729_bases ATGCCTATTCAAGACGAAGGTCAAAATAAAATCAATAAATTAACCGAAAAATTATCCACAGAGGGAATTAATAGCACAAC AATAAAACTGATAGATACAGAATTGCAAAAACTATACTGCCAGCTAGAGGAATCTGAGCAAGTAAGCATAAATTGCATAG AGTGGATACAATATTTTAGGCTAATAGTAAATAACTACGACAGAAAAAAAGTAAATATAATAGCTTCTCTAAATGGAATG ATTTTTTTATTTAGACAATACATAGCATCAACGAATGTAAGAATTGAAACATTTAACATAGAATTGCTAATAAATAATAC CGTTATCAGAATGAGGGAACATTTTGAAAATGAGAATATAAATCTAAATGTTCAAAATGACATAAAGCCGATTCTGATTG GAGACAGTTTCAGAATAAAAGCAGTAATAAGTCAGTTAATTGGTAGTGCTATTATAAACAGTAGCAAGAATAGCAAGATT ACTATTAACATCAAGCAGTATTCAGAAATATTACAATTTACAGTACAAAACATAGGACTAAGCACTTCTAAAGAAAAATT AGAAAGAATAAATGCTGAACTAGAAAATACGAATTTAGTAATGTATCAAGAACTAGGAGAAGGATTAGCATTTATAAAAC ATCTTACACATCAGATGAAAGGGAATCTACGAGTGAAAGAGCGCAATAATTATGTAACTTTTTCATTTGATGTACCAACA ATAGTTTGA
Upstream 100 bases:
>100_bases TTTGATAATAATAAGCTGAAGATTAAATAAGATAAAGTATGAAGCTTTTAACTTTAATCTTCAGCAACCATTTTTTCAAC AAAAATAGTAGGGGAATTCT
Downstream 100 bases:
>100_bases ATTATTCTTTAGGAGAATGCTATGAAAGAAAAGAAGAAAACAATTAACCAATGGATGGTACAAATTCCTCCAATACCAAT TACGTTGATGAATGGAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MPIQDEGQNKINKLTEKLSTEGINSTTIKLIDTELQKLYCQLEESEQVSINCIEWIQYFRLIVNNYDRKKVNIIASLNGM IFLFRQYIASTNVRIETFNIELLINNTVIRMREHFENENINLNVQNDIKPILIGDSFRIKAVISQLIGSAIINSSKNSKI TINIKQYSEILQFTVQNIGLSTSKEKLERINAELENTNLVMYQELGEGLAFIKHLTHQMKGNLRVKERNNYVTFSFDVPT IV
Sequences:
>Translated_242_residues MPIQDEGQNKINKLTEKLSTEGINSTTIKLIDTELQKLYCQLEESEQVSINCIEWIQYFRLIVNNYDRKKVNIIASLNGM IFLFRQYIASTNVRIETFNIELLINNTVIRMREHFENENINLNVQNDIKPILIGDSFRIKAVISQLIGSAIINSSKNSKI TINIKQYSEILQFTVQNIGLSTSKEKLERINAELENTNLVMYQELGEGLAFIKHLTHQMKGNLRVKERNNYVTFSFDVPT IV >Mature_241_residues PIQDEGQNKINKLTEKLSTEGINSTTIKLIDTELQKLYCQLEESEQVSINCIEWIQYFRLIVNNYDRKKVNIIASLNGMI FLFRQYIASTNVRIETFNIELLINNTVIRMREHFENENINLNVQNDIKPILIGDSFRIKAVISQLIGSAIINSSKNSKIT INIKQYSEILQFTVQNIGLSTSKEKLERINAELENTNLVMYQELGEGLAFIKHLTHQMKGNLRVKERNNYVTFSFDVPTI V
Specific function: Unknown
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27990; Mature: 27859
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQDEGQNKINKLTEKLSTEGINSTTIKLIDTELQKLYCQLEESEQVSINCIEWIQYFR CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH LIVNNYDRKKVNIIASLNGMIFLFRQYIASTNVRIETFNIELLINNTVIRMREHFENENI HHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHEEHHHCCCCCE NLNVQNDIKPILIGDSFRIKAVISQLIGSAIINSSKNSKITINIKQYSEILQFTVQNIGL EEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCC STSKEKLERINAELENTNLVMYQELGEGLAFIKHLTHQMKGNLRVKERNNYVTFSFDVPT CCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCC IV CC >Mature Secondary Structure PIQDEGQNKINKLTEKLSTEGINSTTIKLIDTELQKLYCQLEESEQVSINCIEWIQYFR CCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH LIVNNYDRKKVNIIASLNGMIFLFRQYIASTNVRIETFNIELLINNTVIRMREHFENENI HHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHEEHHHCCCCCE NLNVQNDIKPILIGDSFRIKAVISQLIGSAIINSSKNSKITINIKQYSEILQFTVQNIGL EEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCC STSKEKLERINAELENTNLVMYQELGEGLAFIKHLTHQMKGNLRVKERNNYVTFSFDVPT CCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCC IV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA