| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is yjiP [C]
Identifier: 189184548
GI number: 189184548
Start: 1675145
End: 1675348
Strand: Reverse
Name: yjiP [C]
Synonym: OTT_1641
Alternate gene names: 189184548
Gene position: 1675348-1675145 (Counterclockwise)
Preceding gene: 189184549
Following gene: 189184545
Centisome position: 83.39
GC content: 30.39
Gene sequence:
>204_bases ATGACAAAACAATTAAAGCATGATTCATTGGCAAAGACAATCATGAGTGATCCAGTGGCTGCACAAGAATTTCTAGAGTA TTATTTACCAACGGATTTCAAGAGTTTAATAGATTTATCACAAATAAAAGTAGAGCAAGAGAGTTATATAGAAGAATCGT TAAAGAAAAAATACAGCGATATCGTCTATAGATGTATAGTTTAA
Upstream 100 bases:
>100_bases TGAATCAATACAAACTAATATACAATCAGGATTATGTCTGAAACACTAGGCAGAGTATGACACAGCATTTTTTATTTAAA AAACTATAGAGTGAAAAAAT
Downstream 100 bases:
>100_bases GAGGATTTAACTAACAAGAAGAAATAAGTTAGATTAAGAGTTATTATGAGCTTTATACGCTTTATAAAATCTGCTATGTA GTTTATTTCTTCTTGTTAGT
Product: putative transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MTKQLKHDSLAKTIMSDPVAAQEFLEYYLPTDFKSLIDLSQIKVEQESYIEESLKKKYSDIVYRCIV
Sequences:
>Translated_67_residues MTKQLKHDSLAKTIMSDPVAAQEFLEYYLPTDFKSLIDLSQIKVEQESYIEESLKKKYSDIVYRCIV >Mature_66_residues TKQLKHDSLAKTIMSDPVAAQEFLEYYLPTDFKSLIDLSQIKVEQESYIEESLKKKYSDIVYRCIV
Specific function: Unknown
COG id: COG5464
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7863; Mature: 7732
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQLKHDSLAKTIMSDPVAAQEFLEYYLPTDFKSLIDLSQIKVEQESYIEESLKKKYSD CCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVYRCIV HHHHHCC >Mature Secondary Structure TKQLKHDSLAKTIMSDPVAAQEFLEYYLPTDFKSLIDLSQIKVEQESYIEESLKKKYSD CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVYRCIV HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA