Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184549

Identifier: 189184549

GI number: 189184549

Start: 1675400

End: 1676518

Strand: Reverse

Name: 189184549

Synonym: OTT_1642

Alternate gene names: NA

Gene position: 1676518-1675400 (Counterclockwise)

Preceding gene: 189184550

Following gene: 189184548

Centisome position: 83.45

GC content: 31.28

Gene sequence:

>1119_bases
GTGAATGACCCTAATATAACAATTATAGCAGAAGGCGCTGAAACAGCATTGAGCTTGCAGCAATCAGGCATTAAAGGTAA
TATCATTGCTAGTGCAGGAATTTCGAATTTGAGAAATTATTCACCATTTCCTGGTGAAAAAATCATCATTGCAGCAGATA
ATGATAGCAAAAATCCTATAACTAATAATACTGTAATTAAAGCTGCAAAAACGTTAGAAATGAAGGGAGCGATAACTTGT
ATAGTCAAACCACCAGAAAATGGTGATTTTAATAATCTGTTGCAAAGTTGTGGAGACCAGTCAATTAGAGACATTATAGA
ACCTGAAATTACTAAACTGACTAAGGCAGTTGAAACAACAAAACTTACTCAAACAGAAAATAATAGTATAGCAAAACAAA
ATGATATTACAAATGTTAAAGAATTGTATAATAAATCGTCATCTCTATACTATTTAAAACAAGAAGAGGAAGCTAAGGTG
GAAGCGATAGTAGTAAACAAATTTTTAGAAAACCATACAGGAATTTATAGTGCAAAAATCTTTAACAATTCTAATTTAAG
GGCAAATATGGTTTTTGATGAAGAGACTCAAAAATCCTGGCCTGCACTCACTATTTTTGTTAAAAATGAAGCAGGTGAAA
TTACTGGAGCTAAGATATTAACTCTGAATTCAAAAACATGTAATAAAGCTGATATTCCAGAAAAATCTGTTGGTACAATT
AGTGGCTCATTTGCTGAAATTGCTCAACAAAATTCAAAATATTCACCTGTAACAATTATTACAAAAGATATTGAAACAGC
GTTAACCATTAGGCAAGCTGGAGTAGAAGGAAAAATCTTATGTGCAATTGAAGCCGAAAATTTGCAAAACTATAATCCTG
GCCTAAAAGAAAAGATCATTCTAGCAGTTAAAAATGACGTAAATACTGAAAAAGCTGAAAAAGTTCTGGAGGATAAGGGA
GCAGTAGTCTGTACAGTCAAAAATGACTTCAATAATGTATTAAAAACTCAAGGATTATATGCTGTTAGAAATATTATCAG
CCCTGAAATAAGAAAACTTAATGAAAAAATTGAATCAATACAAACTAATATACAATCAGGATTATGTCTGAAACACTAG

Upstream 100 bases:

>100_bases
GCAATAAAATTATAATTCAAACGGTAAAAATAGCAAATATTTATATCGTAAAACAATAGGTAAAATCAGAGGATCATTTA
TAATAATAGCAAAACGAAAT

Downstream 100 bases:

>100_bases
GCAGAGTATGACACAGCATTTTTTATTTAAAAAACTATAGAGTGAAAAAATATGACAAAACAATTAAAGCATGATTCATT
GGCAAAGACAATCATGAGTG

Product: putative conjugative transfer protein TraI

Products: NA

Alternate protein names: Conjugative Transfer Protein TraI; Conjugal Transfer Protein TraA; MobA/MobL Family Protein

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MNDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITC
IVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKV
EAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTI
SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGLKEKIILAVKNDVNTEKAEKVLEDKG
AVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQSGLCLKH

Sequences:

>Translated_372_residues
MNDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITC
IVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKV
EAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTI
SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGLKEKIILAVKNDVNTEKAEKVLEDKG
AVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQSGLCLKH
>Mature_372_residues
MNDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITC
IVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKV
EAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTI
SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGLKEKIILAVKNDVNTEKAEKVLEDKG
AVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQSGLCLKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40746; Mature: 40746

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPI
CCCCCEEEEECCCHHHHHHHHCCCCCEEEEECCHHHHCCCCCCCCCEEEEEECCCCCCCC
TNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETT
CCCHHHHHHHHEEECCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHH
KLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSAKI
HEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEE
FNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTI
ECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGLKEKII
CCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEE
LAVKNDVNTEKAEKVLEDKGAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESI
EEEECCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH
QTNIQSGLCLKH
HHHHHCCCCCCC
>Mature Secondary Structure
MNDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPI
CCCCCEEEEECCCHHHHHHHHCCCCCEEEEECCHHHHCCCCCCCCCEEEEEECCCCCCCC
TNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETT
CCCHHHHHHHHEEECCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHH
KLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSAKI
HEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEE
FNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTI
ECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGLKEKII
CCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEE
LAVKNDVNTEKAEKVLEDKGAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESI
EEEECCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH
QTNIQSGLCLKH
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA