| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184549
Identifier: 189184549
GI number: 189184549
Start: 1675400
End: 1676518
Strand: Reverse
Name: 189184549
Synonym: OTT_1642
Alternate gene names: NA
Gene position: 1676518-1675400 (Counterclockwise)
Preceding gene: 189184550
Following gene: 189184548
Centisome position: 83.45
GC content: 31.28
Gene sequence:
>1119_bases GTGAATGACCCTAATATAACAATTATAGCAGAAGGCGCTGAAACAGCATTGAGCTTGCAGCAATCAGGCATTAAAGGTAA TATCATTGCTAGTGCAGGAATTTCGAATTTGAGAAATTATTCACCATTTCCTGGTGAAAAAATCATCATTGCAGCAGATA ATGATAGCAAAAATCCTATAACTAATAATACTGTAATTAAAGCTGCAAAAACGTTAGAAATGAAGGGAGCGATAACTTGT ATAGTCAAACCACCAGAAAATGGTGATTTTAATAATCTGTTGCAAAGTTGTGGAGACCAGTCAATTAGAGACATTATAGA ACCTGAAATTACTAAACTGACTAAGGCAGTTGAAACAACAAAACTTACTCAAACAGAAAATAATAGTATAGCAAAACAAA ATGATATTACAAATGTTAAAGAATTGTATAATAAATCGTCATCTCTATACTATTTAAAACAAGAAGAGGAAGCTAAGGTG GAAGCGATAGTAGTAAACAAATTTTTAGAAAACCATACAGGAATTTATAGTGCAAAAATCTTTAACAATTCTAATTTAAG GGCAAATATGGTTTTTGATGAAGAGACTCAAAAATCCTGGCCTGCACTCACTATTTTTGTTAAAAATGAAGCAGGTGAAA TTACTGGAGCTAAGATATTAACTCTGAATTCAAAAACATGTAATAAAGCTGATATTCCAGAAAAATCTGTTGGTACAATT AGTGGCTCATTTGCTGAAATTGCTCAACAAAATTCAAAATATTCACCTGTAACAATTATTACAAAAGATATTGAAACAGC GTTAACCATTAGGCAAGCTGGAGTAGAAGGAAAAATCTTATGTGCAATTGAAGCCGAAAATTTGCAAAACTATAATCCTG GCCTAAAAGAAAAGATCATTCTAGCAGTTAAAAATGACGTAAATACTGAAAAAGCTGAAAAAGTTCTGGAGGATAAGGGA GCAGTAGTCTGTACAGTCAAAAATGACTTCAATAATGTATTAAAAACTCAAGGATTATATGCTGTTAGAAATATTATCAG CCCTGAAATAAGAAAACTTAATGAAAAAATTGAATCAATACAAACTAATATACAATCAGGATTATGTCTGAAACACTAG
Upstream 100 bases:
>100_bases GCAATAAAATTATAATTCAAACGGTAAAAATAGCAAATATTTATATCGTAAAACAATAGGTAAAATCAGAGGATCATTTA TAATAATAGCAAAACGAAAT
Downstream 100 bases:
>100_bases GCAGAGTATGACACAGCATTTTTTATTTAAAAAACTATAGAGTGAAAAAATATGACAAAACAATTAAAGCATGATTCATT GGCAAAGACAATCATGAGTG
Product: putative conjugative transfer protein TraI
Products: NA
Alternate protein names: Conjugative Transfer Protein TraI; Conjugal Transfer Protein TraA; MobA/MobL Family Protein
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MNDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITC IVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKV EAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTI SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGLKEKIILAVKNDVNTEKAEKVLEDKG AVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQSGLCLKH
Sequences:
>Translated_372_residues MNDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITC IVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKV EAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTI SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGLKEKIILAVKNDVNTEKAEKVLEDKG AVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQSGLCLKH >Mature_372_residues MNDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITC IVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKV EAIVVNKFLENHTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTI SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGLKEKIILAVKNDVNTEKAEKVLEDKG AVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQSGLCLKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40746; Mature: 40746
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPI CCCCCEEEEECCCHHHHHHHHCCCCCEEEEECCHHHHCCCCCCCCCEEEEEECCCCCCCC TNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETT CCCHHHHHHHHEEECCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHH KLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSAKI HEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEE FNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTI ECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGLKEKII CCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEE LAVKNDVNTEKAEKVLEDKGAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESI EEEECCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH QTNIQSGLCLKH HHHHHCCCCCCC >Mature Secondary Structure MNDPNITIIAEGAETALSLQQSGIKGNIIASAGISNLRNYSPFPGEKIIIAADNDSKNPI CCCCCEEEEECCCHHHHHHHHCCCCCEEEEECCHHHHCCCCCCCCCEEEEEECCCCCCCC TNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQSCGDQSIRDIIEPEITKLTKAVETT CCCHHHHHHHHEEECCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHH KLTQTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSAKI HEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEE FNNSNLRANMVFDEETQKSWPALTIFVKNEAGEITGAKILTLNSKTCNKADIPEKSVGTI ECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC SGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGLKEKII CCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEE LAVKNDVNTEKAEKVLEDKGAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESI EEEECCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH QTNIQSGLCLKH HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA