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The map label for this gene is intB [C]

Identifier: 189184444

GI number: 189184444

Start: 1563657

End: 1564679

Strand: Reverse

Name: intB [C]

Synonym: OTT_1537

Alternate gene names: 189184444

Gene position: 1564679-1563657 (Counterclockwise)

Preceding gene: 189184445

Following gene: 189184442

Centisome position: 77.88

GC content: 31.87

Gene sequence:

>1023_bases
ATGCCTTCAATATCATCATCATCAAAGTTTAGAAAGCAGTTATTAAATAAAATTAACATTCCTGAGGGAGAAAAATTATT
AATTATTCACCATCCAGATATAATAGGACTTAAACTGAAAATCTCATGTACAGTCTGTGGAGGAAAAGTAAGAAAAACAT
GGATTTTAGAACAAAAATATAAAAACCAGAGTTTAAAAATAAGGATAGGGGAATTTCCATATTTATCTATTAAAGAAGCT
ATAAAAAAAGCAATAGAATTAAAGACATTAATGGCGAACGGAATAGATCCAAGAACAGTAAAACGTCAACAAAAGATAGA
AGAAAATGAGAATCGTATAAAAGAAAGAGAAAGAAAAGCTAACGATATTACATTCAAAGAGCTGTGTTATAGGTATATTG
AAGAGTATGCCAAAATATATACTATAAACTGGGAAGAGTATACTGACAGAGTACATACTTATGCACAATCATTATATGGA
AAAAAGATAAGCCAGATTCGAATGAGTGATATTCAACAAATATTCAATGATATCAGCAAAGAGGGAAAATATGCGACAGC
AAATCTATTGCTAGCAACCTTACGCACTATGTTTAATAAGGCAATAAAATGGGGATTAATAGAAAACAATCCTACTCTAG
GAATAGAGCAGCATAAACTGCAAGCAAGAGAGAGACGTCTAAGTTACGATAAAATGGGTAGACTTTTACACGTATTATGT
GGAGAAACAACTCCATTGATAAGAGATTTTGCATTACTAGCGTTATATACTGGAGCTAGAAAAAGTAATGTATTAGAGAT
GGAATGTGACAATATAGATTTTGAAAGAAAAATATGGCATATACCAAAAACTAAGAACGGAAAGGCGCAAAATATACCAT
TAACAGATGAGGCAATGGAAATATTGCAAGCAAGGAAATTAACATCTAAAAGTAAATGGGTGCTACAAAGCGATAGTAGC
AAAAGCGGACACTTAGAAAGCCATATGAAGCATGGAATAGGATTTGTGAAAAGGCAGGCATAA

Upstream 100 bases:

>100_bases
ATAAAAAATTTGATATCAAAAAAAGCATAATTTATATCAGATGTTTAATAAAACGTAATATATATTAATAATATCAACAT
TAATATTATGTGGGGTAATT

Downstream 100 bases:

>100_bases
AAAATTTCAGAATACACGATCTAAGAAGGACGTTTGCAAGTTGTATGGAGATGCAGGTGCAAGTCAGAGAACAATTAGCA
CAGCATTGAATCATATGAAT

Product: putative integrase

Products: NA

Alternate protein names: Integrase Family Protein; Phage-Related Integrase; Phage Integrase Family Protein; Phage Integrase; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MPSISSSSKFRKQLLNKINIPEGEKLLIIHHPDIIGLKLKISCTVCGGKVRKTWILEQKYKNQSLKIRIGEFPYLSIKEA
IKKAIELKTLMANGIDPRTVKRQQKIEENENRIKERERKANDITFKELCYRYIEEYAKIYTINWEEYTDRVHTYAQSLYG
KKISQIRMSDIQQIFNDISKEGKYATANLLLATLRTMFNKAIKWGLIENNPTLGIEQHKLQARERRLSYDKMGRLLHVLC
GETTPLIRDFALLALYTGARKSNVLEMECDNIDFERKIWHIPKTKNGKAQNIPLTDEAMEILQARKLTSKSKWVLQSDSS
KSGHLESHMKHGIGFVKRQA

Sequences:

>Translated_340_residues
MPSISSSSKFRKQLLNKINIPEGEKLLIIHHPDIIGLKLKISCTVCGGKVRKTWILEQKYKNQSLKIRIGEFPYLSIKEA
IKKAIELKTLMANGIDPRTVKRQQKIEENENRIKERERKANDITFKELCYRYIEEYAKIYTINWEEYTDRVHTYAQSLYG
KKISQIRMSDIQQIFNDISKEGKYATANLLLATLRTMFNKAIKWGLIENNPTLGIEQHKLQARERRLSYDKMGRLLHVLC
GETTPLIRDFALLALYTGARKSNVLEMECDNIDFERKIWHIPKTKNGKAQNIPLTDEAMEILQARKLTSKSKWVLQSDSS
KSGHLESHMKHGIGFVKRQA
>Mature_339_residues
PSISSSSKFRKQLLNKINIPEGEKLLIIHHPDIIGLKLKISCTVCGGKVRKTWILEQKYKNQSLKIRIGEFPYLSIKEAI
KKAIELKTLMANGIDPRTVKRQQKIEENENRIKERERKANDITFKELCYRYIEEYAKIYTINWEEYTDRVHTYAQSLYGK
KISQIRMSDIQQIFNDISKEGKYATANLLLATLRTMFNKAIKWGLIENNPTLGIEQHKLQARERRLSYDKMGRLLHVLCG
ETTPLIRDFALLALYTGARKSNVLEMECDNIDFERKIWHIPKTKNGKAQNIPLTDEAMEILQARKLTSKSKWVLQSDSSK
SGHLESHMKHGIGFVKRQA

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39507; Mature: 39375

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSISSSSKFRKQLLNKINIPEGEKLLIIHHPDIIGLKLKISCTVCGGKVRKTWILEQKY
CCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEEEEEECCCHHHHHHHHHHH
KNQSLKIRIGEFPYLSIKEAIKKAIELKTLMANGIDPRTVKRQQKIEENENRIKERERKA
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NDITFKELCYRYIEEYAKIYTINWEEYTDRVHTYAQSLYGKKISQIRMSDIQQIFNDISK
CCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGKYATANLLLATLRTMFNKAIKWGLIENNPTLGIEQHKLQARERRLSYDKMGRLLHVLC
CCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
GETTPLIRDFALLALYTGARKSNVLEMECDNIDFERKIWHIPKTKNGKAQNIPLTDEAME
CCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHEEECCCCCCCCCCCCCCCHHHHH
ILQARKLTSKSKWVLQSDSSKSGHLESHMKHGIGFVKRQA
HHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
PSISSSSKFRKQLLNKINIPEGEKLLIIHHPDIIGLKLKISCTVCGGKVRKTWILEQKY
CCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEEEEEECCCHHHHHHHHHHH
KNQSLKIRIGEFPYLSIKEAIKKAIELKTLMANGIDPRTVKRQQKIEENENRIKERERKA
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NDITFKELCYRYIEEYAKIYTINWEEYTDRVHTYAQSLYGKKISQIRMSDIQQIFNDISK
CCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGKYATANLLLATLRTMFNKAIKWGLIENNPTLGIEQHKLQARERRLSYDKMGRLLHVLC
CCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
GETTPLIRDFALLALYTGARKSNVLEMECDNIDFERKIWHIPKTKNGKAQNIPLTDEAME
CCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHEEECCCCCCCCCCCCCCCHHHHH
ILQARKLTSKSKWVLQSDSSKSGHLESHMKHGIGFVKRQA
HHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA