| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184445
Identifier: 189184445
GI number: 189184445
Start: 1565138
End: 1565368
Strand: Reverse
Name: 189184445
Synonym: OTT_1538
Alternate gene names: NA
Gene position: 1565368-1565138 (Counterclockwise)
Preceding gene: 189184446
Following gene: 189184444
Centisome position: 77.92
GC content: 30.3
Gene sequence:
>231_bases TTGAGTTATAAGTATAAAGAATACTTTTGCTTACCAAGCTATAGTAGAATAATACAACTGTGGCATGGAATGTTGCTACC ATTAGTCGTATTAATGCATTATCTGAAAGGAGAAGAGACTGGTATATATTACATCGATTCTACAAAGTTAGCAATTTGTC ATAATAAATGTACCTCAAGCAATAGAGTTTTTAACAGAATTTCTAAAATTGGTAAAAGTAGTTATGGCTGA
Upstream 100 bases:
>100_bases AAACTGAGATGGAAAGTTATCCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATTTATCTCCATGCAGGGATTGTA AGAATTATTATCTATATTAC
Downstream 100 bases:
>100_bases TTCTTAGGCTTTAAGCTTCATCTTAAAATCAATAAGATGTGCTATAGGTAAAAATGCAAAGGTAGATCAAATATAAGGAA GAAGAAAAGTTAATTTTTAT
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MSYKYKEYFCLPSYSRIIQLWHGMLLPLVVLMHYLKGEETGIYYIDSTKLAICHNKCTSSNRVFNRISKIGKSSYG
Sequences:
>Translated_76_residues MSYKYKEYFCLPSYSRIIQLWHGMLLPLVVLMHYLKGEETGIYYIDSTKLAICHNKCTSSNRVFNRISKIGKSSYG >Mature_75_residues SYKYKEYFCLPSYSRIIQLWHGMLLPLVVLMHYLKGEETGIYYIDSTKLAICHNKCTSSNRVFNRISKIGKSSYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8890; Mature: 8758
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKYKEYFCLPSYSRIIQLWHGMLLPLVVLMHYLKGEETGIYYIDSTKLAICHNKCTSS CCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCC NRVFNRISKIGKSSYG HHHHHHHHHHHCCCCC >Mature Secondary Structure SYKYKEYFCLPSYSRIIQLWHGMLLPLVVLMHYLKGEETGIYYIDSTKLAICHNKCTSS CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCC NRVFNRISKIGKSSYG HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA