| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184431
Identifier: 189184431
GI number: 189184431
Start: 1553709
End: 1553843
Strand: Reverse
Name: 189184431
Synonym: OTT_1524
Alternate gene names: NA
Gene position: 1553843-1553709 (Counterclockwise)
Preceding gene: 189184433
Following gene: 189184430
Centisome position: 77.34
GC content: 31.11
Gene sequence:
>135_bases ATGGCTATACAGTTTACAAGGATTGAATTTTTAACTAGAAGTAAAGGAGGTGATAGTTGTCGTAAGGCAGCGTATAATGC AAGAACTATTGTTAAAAATGAGCAGACAAAAATAAGGTATAACTTCTTTTACTAA
Upstream 100 bases:
>100_bases GTACTCATTAACCGATTGAATGTTAAAAAAAAAGAAGTTTGTGCTAGCAAAATCAAAAAAACCATGCTAACTTAAAACTC AGGTGAGAATTGGTATTGAG
Downstream 100 bases:
>100_bases GCATGATGTTGAAAAAGCAGTAAAAGATATACCAGATCTAACAGCAAGAGAACAGTTAGTTCAGAAAGTGCTTAGTTCAA ATAGAATACTAGAATTATAT
Product: putative conjugative transfer protein TraA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 43
Protein sequence:
>44_residues MAIQFTRIEFLTRSKGGDSCRKAAYNARTIVKNEQTKIRYNFFY
Sequences:
>Translated_44_residues MAIQFTRIEFLTRSKGGDSCRKAAYNARTIVKNEQTKIRYNFFY >Mature_43_residues AIQFTRIEFLTRSKGGDSCRKAAYNARTIVKNEQTKIRYNFFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5238; Mature: 5107
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQFTRIEFLTRSKGGDSCRKAAYNARTIVKNEQTKIRYNFFY CCEEEEEEEEEECCCCCCCHHHHCCCCEEEEECCCCEEEEEEEC >Mature Secondary Structure AIQFTRIEFLTRSKGGDSCRKAAYNARTIVKNEQTKIRYNFFY CEEEEEEEEEECCCCCCCHHHHCCCCEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA