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The map label for this gene is traA [H]

Identifier: 189184430

GI number: 189184430

Start: 1552499

End: 1553641

Strand: Reverse

Name: traA [H]

Synonym: OTT_1523

Alternate gene names: 189184430

Gene position: 1553641-1552499 (Counterclockwise)

Preceding gene: 189184431

Following gene: 189184429

Centisome position: 77.33

GC content: 33.6

Gene sequence:

>1143_bases
GTGCTTAGTTCAAATAGAATACTAGAATTATATCATGATGATGGTGAAAGTAGCAAATATTTTACGACAATTGAGGTTCG
AAATGAGGAGACGAGAATAATCAGAATAGCTAATAAAATCAATGATCAGGTTTATTACAACAACATTTACAATCTTAAAA
GTGATATAGAAGGTCTAGCAAATGTTAGTGAGGAACAGAAACAAGCGCTAAGGCATATTTTGCTTAGCACTAGTGGAGTT
AGAGTCTTAAGAGGAAGAGCTGGTACAGGAAAATCTTATGTTTTAATAAAAGCGCATAAGCTTGCAACAAATCGTGGACA
AAAAGTTATTGGTCTTGCTCCTACTCATAAGGCAGTATCAGAGCTGAGGAGCAAAGGTTATACAGAGGTCTATACAGTAA
AAGGATTTTTATATAATCGAAAAAAAATTTTTATGCAAGACAGCTTAATAGTAGTAGATGAAGCTGGAATGGTAGGTACT
AAAGCTTATGCAGAGCTGTTTAGAGTAGTTAGAAACAATAATTGTCAACTGATACTTGCTGGAGATGAAAAACAGCTAGC
TTCAATAGAAAGAGGTGGAATGTTTGAGATGCTGAGTAATATTTTTGGTTCACATGTTTTAGTAAATATTCGAAGACAAA
GTAAAAACTGGAGCAGAGAAGCAGCAATGGAGTTTGCTGAGAGTAATATTTTAAGCGGTATAACCTTACTGAGGCAAAAT
AACTGCGTTAGGTTTGATAATACGTTGCAGGACTCAATGAGTAAATTAATATACAACTGGAGTCTAAGCAAATTTAAACC
ACATGAAAAATTGGTAATTACAGTACGTAATAAAGATGTCGACATTCTTAATTCAAGTATTAGGTCTTTGTTAAAAGCAA
ATGGTACGCTAAAAGGCACAGAATATGAGCGTTCTATTGATGGAAGGAAAAAGTCATATATGGCAGGAGATAGAATCGTA
TTTCAAAAAAGCTATAAGGATTTACAAATACAAAATAGTGAATTTGCAACTTTAACTTCGGTTAGTAAAAATGAATTTAT
AGCTAAGACAGATGCAGGAAAAGAGGTGAGTTTTGATTCGGTAAAATACAATTTAAACATGGCTATGCAAGTACTGTTTA
TAAGGTCCAGGGAGCTTCTGTAA

Upstream 100 bases:

>100_bases
CAGACAAAAATAAGGTATAACTTCTTTTACTAAGCATGATGTTGAAAAAGCAGTAAAAGATATACCAGATCTAACAGCAA
GAGAACAGTTAGTTCAGAAA

Downstream 100 bases:

>100_bases
AAGATGTATACGTTTTGCATAACGGAGTAAGTAATATAAGCAGCTCATACGTAGCTATGACAAGGCATATAGAGAACTTG
CAGCTATATTGCAATAAGAA

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MLSSNRILELYHDDGESSKYFTTIEVRNEETRIIRIANKINDQVYYNNIYNLKSDIEGLANVSEEQKQALRHILLSTSGV
RVLRGRAGTGKSYVLIKAHKLATNRGQKVIGLAPTHKAVSELRSKGYTEVYTVKGFLYNRKKIFMQDSLIVVDEAGMVGT
KAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSKNWSREAAMEFAESNILSGITLLRQN
NCVRFDNTLQDSMSKLIYNWSLSKFKPHEKLVITVRNKDVDILNSSIRSLLKANGTLKGTEYERSIDGRKKSYMAGDRIV
FQKSYKDLQIQNSEFATLTSVSKNEFIAKTDAGKEVSFDSVKYNLNMAMQVLFIRSRELL

Sequences:

>Translated_380_residues
MLSSNRILELYHDDGESSKYFTTIEVRNEETRIIRIANKINDQVYYNNIYNLKSDIEGLANVSEEQKQALRHILLSTSGV
RVLRGRAGTGKSYVLIKAHKLATNRGQKVIGLAPTHKAVSELRSKGYTEVYTVKGFLYNRKKIFMQDSLIVVDEAGMVGT
KAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSKNWSREAAMEFAESNILSGITLLRQN
NCVRFDNTLQDSMSKLIYNWSLSKFKPHEKLVITVRNKDVDILNSSIRSLLKANGTLKGTEYERSIDGRKKSYMAGDRIV
FQKSYKDLQIQNSEFATLTSVSKNEFIAKTDAGKEVSFDSVKYNLNMAMQVLFIRSRELL
>Mature_380_residues
MLSSNRILELYHDDGESSKYFTTIEVRNEETRIIRIANKINDQVYYNNIYNLKSDIEGLANVSEEQKQALRHILLSTSGV
RVLRGRAGTGKSYVLIKAHKLATNRGQKVIGLAPTHKAVSELRSKGYTEVYTVKGFLYNRKKIFMQDSLIVVDEAGMVGT
KAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSKNWSREAAMEFAESNILSGITLLRQN
NCVRFDNTLQDSMSKLIYNWSLSKFKPHEKLVITVRNKDVDILNSSIRSLLKANGTLKGTEYERSIDGRKKSYMAGDRIV
FQKSYKDLQIQNSEFATLTSVSKNEFIAKTDAGKEVSFDSVKYNLNMAMQVLFIRSRELL

Specific function: traI Has Been Identified As DNA Helicase I And It Also Has An Additional Activity Of Site-Specific Nicking At Orit. DNA Helicase I Is A Potent DNA-Dependent ATPase. [C]

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 43259; Mature: 43259

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSNRILELYHDDGESSKYFTTIEVRNEETRIIRIANKINDQVYYNNIYNLKSDIEGLA
CCCCCCEEEEEECCCCCCEEEEEEEEECCCCEEEEEEHHCCCEEEECCHHCCHHHHHHHH
NVSEEQKQALRHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRGQKVIGLAPTHKAVS
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEEHHCCCCCEEEEECCCHHHHH
ELRSKGYTEVYTVKGFLYNRKKIFMQDSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILA
HHHHCCCEEEEEEEEEEECCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
GDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSKNWSREAAMEFAESNILSGITLLRQN
CCCHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEECC
NCVRFDNTLQDSMSKLIYNWSLSKFKPHEKLVITVRNKDVDILNSSIRSLLKANGTLKGT
CCEEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCC
EYERSIDGRKKSYMAGDRIVFQKSYKDLQIQNSEFATLTSVSKNEFIAKTDAGKEVSFDS
CHHHCCCCCHHHHCCCCEEEEEECCCCEEECCCCCEEEEECCCCCEEEECCCCCCCCCCC
VKYNLNMAMQVLFIRSRELL
EEEEHHHHEEEEEEHHHCCC
>Mature Secondary Structure
MLSSNRILELYHDDGESSKYFTTIEVRNEETRIIRIANKINDQVYYNNIYNLKSDIEGLA
CCCCCCEEEEEECCCCCCEEEEEEEEECCCCEEEEEEHHCCCEEEECCHHCCHHHHHHHH
NVSEEQKQALRHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRGQKVIGLAPTHKAVS
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEEHHCCCCCEEEEECCCHHHHH
ELRSKGYTEVYTVKGFLYNRKKIFMQDSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILA
HHHHCCCEEEEEEEEEEECCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
GDEKQLASIERGGMFEMLSNIFGSHVLVNIRRQSKNWSREAAMEFAESNILSGITLLRQN
CCCHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEECC
NCVRFDNTLQDSMSKLIYNWSLSKFKPHEKLVITVRNKDVDILNSSIRSLLKANGTLKGT
CCEEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCC
EYERSIDGRKKSYMAGDRIVFQKSYKDLQIQNSEFATLTSVSKNEFIAKTDAGKEVSFDS
CHHHCCCCCHHHHCCCCEEEEEECCCCEEECCCCCEEEEECCCCCEEEECCCCCCCCCCC
VKYNLNMAMQVLFIRSRELL
EEEEHHHHEEEEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]