| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184411
Identifier: 189184411
GI number: 189184411
Start: 1531266
End: 1531601
Strand: Reverse
Name: 189184411
Synonym: OTT_1504
Alternate gene names: NA
Gene position: 1531601-1531266 (Counterclockwise)
Preceding gene: 189184412
Following gene: 189184410
Centisome position: 76.24
GC content: 36.9
Gene sequence:
>336_bases ATGAGAAATCTCATGCTACAATTGCGGCTAAAGGTGATTATGCAAAATCAAAAATTATGTTGGACATTATCAAGGCCGTT GAAGTATATGGGTTTGAGCATTGATGAATGGGGAGTAGTGCTAGCTGGAGTAGCTCCAGGAATTGTACTACTAAACAGCA GGCATGCTAAATTAGGCCTAGCATTTATGGTTGGAGGAATTGCTCTATGTTATTGCTTTAAGAAATTTAAGAAGGTATCG GAGAATTTTTTGCTAAAAAGTTTTTTAGTAGCTAAAGGTTTATTGCCAGCTCCATTAGGATATTCAAGACTGCTGGGCAA AAAAGTTGGCAAATAA
Upstream 100 bases:
>100_bases AGTGCGACTTCATGTCGCACATGCATGTATGTAAACTAATTATTGTAGGTAAAATCTGTGTTTGAAGATGTTTAGCTAAT TTAAACATTATAGTAGCAGA
Downstream 100 bases:
>100_bases TGAATCATCTCTTTAAGCAAAATGCTATACAAGAGCTGGTTAAATATAATAAATGCTTACTTTCAGTAACTATATTGCTA GCTGCAGCTAATATAATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MRNLMLQLRLKVIMQNQKLCWTLSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKLGLAFMVGGIALCYCFKKFKKVS ENFLLKSFLVAKGLLPAPLGYSRLLGKKVGK
Sequences:
>Translated_111_residues MRNLMLQLRLKVIMQNQKLCWTLSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKLGLAFMVGGIALCYCFKKFKKVS ENFLLKSFLVAKGLLPAPLGYSRLLGKKVGK >Mature_111_residues MRNLMLQLRLKVIMQNQKLCWTLSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKLGLAFMVGGIALCYCFKKFKKVS ENFLLKSFLVAKGLLPAPLGYSRLLGKKVGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12351; Mature: 12351
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLMLQLRLKVIMQNQKLCWTLSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKLGL CCCHHHHHHHHHHHCCCCCEEEHHCCHHHHCCCCCCHHHHHHCCCCCEEEECCCCHHHHH AFMVGGIALCYCFKKFKKVSENFLLKSFLVAKGLLPAPLGYSRLLGKKVGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MRNLMLQLRLKVIMQNQKLCWTLSRPLKYMGLSIDEWGVVLAGVAPGIVLLNSRHAKLGL CCCHHHHHHHHHHHCCCCCEEEHHCCHHHHCCCCCCHHHHHHCCCCCEEEECCCCHHHHH AFMVGGIALCYCFKKFKKVSENFLLKSFLVAKGLLPAPLGYSRLLGKKVGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA