| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184410
Identifier: 189184410
GI number: 189184410
Start: 1530715
End: 1531266
Strand: Reverse
Name: 189184410
Synonym: OTT_1503
Alternate gene names: NA
Gene position: 1531266-1530715 (Counterclockwise)
Preceding gene: 189184411
Following gene: 189184409
Centisome position: 76.22
GC content: 31.34
Gene sequence:
>552_bases ATGAATCATCTCTTTAAGCAAAATGCTATACAAGAGCTGGTTAAATATAATAAATGCTTACTTTCAGTAACTATATTGCT AGCTGCAGCTAATATAATTGCGATAATGGCTGCAATTACCAAAGAAGAAAAGTGGTTATTAATTCCAGCAATGGAGCCTG ATCGTAAAATGACGATTTCATCAAAAAATTACCATGAAACCTATTTAAAGGAATGGGCAATTTATGTAACGAAACTCTTA TTTACTACTTCTCCAAATGAGGTAGAAAGACAAATAGCAAACATGAAAGTGGCATCTAGTAATACTGAATCTTTAAATAA ATTTTTTCATGATCACTTGCAATTTGTTAAAGGCTCAAATGTATCTTCAGTCTTTTTTCCAAAGAATGTTGAAGTGATAA AGGATGGAGTATTAATTAGTGGAACGCTTCGTTATTGGTTTAGCGATAGTAAAGATATAGCTGTCGATAAGACTTACCTT TTGACTTACAAGCAAACTCCTAATTACCTTTTATTGTTGACTGGTGTTAAAGAGAATGGAATAAAAAAATGA
Upstream 100 bases:
>100_bases TATCGGAGAATTTTTTGCTAAAAAGTTTTTTAGTAGCTAAAGGTTTATTGCCAGCTCCATTAGGATATTCAAGACTGCTG GGCAAAAAAGTTGGCAAATA
Downstream 100 bases:
>100_bases ATATTAGAATTTTGAGATTTATCATAGGGTTTATTGCTTTGGTAAACGTTAATAATATATATGCAGTAGAATATACATTA CAAGATGATGAGCTGCTTAA
Product: putative conjugative transfer protein TraE
Products: NA
Alternate protein names: Conjugative Transfer Protein
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAITKEEKWLLIPAMEPDRKMTISSKNYHETYLKEWAIYVTKLL FTTSPNEVERQIANMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNVEVIKDGVLISGTLRYWFSDSKDIAVDKTYL LTYKQTPNYLLLLTGVKENGIKK
Sequences:
>Translated_183_residues MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAITKEEKWLLIPAMEPDRKMTISSKNYHETYLKEWAIYVTKLL FTTSPNEVERQIANMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNVEVIKDGVLISGTLRYWFSDSKDIAVDKTYL LTYKQTPNYLLLLTGVKENGIKK >Mature_183_residues MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAITKEEKWLLIPAMEPDRKMTISSKNYHETYLKEWAIYVTKLL FTTSPNEVERQIANMKVASSNTESLNKFFHDHLQFVKGSNVSSVFFPKNVEVIKDGVLISGTLRYWFSDSKDIAVDKTYL LTYKQTPNYLLLLTGVKENGIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20954; Mature: 20954
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAITKEEKWLLIPAMEPDRKMTIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEC SKNYHETYLKEWAIYVTKLLFTTSPNEVERQIANMKVASSNTESLNKFFHDHLQFVKGSN CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCC VSSVFFPKNVEVIKDGVLISGTLRYWFSDSKDIAVDKTYLLTYKQTPNYLLLLTGVKENG CCEEECCCCHHEECCCEEEEEEEEEEECCCCCEEECEEEEEEEECCCCEEEEEECCCCCC IKK CCC >Mature Secondary Structure MNHLFKQNAIQELVKYNKCLLSVTILLAAANIIAIMAAITKEEKWLLIPAMEPDRKMTIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEC SKNYHETYLKEWAIYVTKLLFTTSPNEVERQIANMKVASSNTESLNKFFHDHLQFVKGSN CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCC VSSVFFPKNVEVIKDGVLISGTLRYWFSDSKDIAVDKTYLLTYKQTPNYLLLLTGVKENG CCEEECCCCHHEECCCEEEEEEEEEEECCCCCEEECEEEEEEEECCCCEEEEEECCCCCC IKK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA